RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 PUS7Q96PZ0 661 aaKnown RBP16.95■□□□□ 0.3
PRPF8-215ENST00000576958 SYT17Q9BSW7 474 aa16.95■□□□□ 0.3
PRPF8-215ENST00000576958 MTFR1LQ9H019 292 aa16.94■□□□□ 0.3
PRPF8-215ENST00000576958 KIF20BQ96Q89 1820 aa16.93■□□□□ 0.3
PRPF8-215ENST00000576958 PNPLA7Q6ZV29 1317 aa16.93■□□□□ 0.3
PRPF8-215ENST00000576958 GOLGB1Q14789 3259 aaKnown RBP16.92■□□□□ 0.3
PRPF8-215ENST00000576958 HSP90AB2PQ58FF8 381 aa16.92■□□□□ 0.3
PRPF8-215ENST00000576958 CARD14Q9BXL6 1004 aa16.92■□□□□ 0.3
PRPF8-215ENST00000576958 LY75O60449 1722 aa16.92■□□□□ 0.3
PRPF8-215ENST00000576958 ZCRB1Q8TBF4 217 aaKnown RBP16.9■□□□□ 0.3
PRPF8-215ENST00000576958 ARXQ96QS3 562 aa16.9■□□□□ 0.3
PRPF8-215ENST00000576958 EMILIN1Q9Y6C2 1016 aa16.89■□□□□ 0.29
PRPF8-215ENST00000576958 TOGARAM1Q9Y4F4 1720 aa16.89■□□□□ 0.29
PRPF8-215ENST00000576958 TMF1P82094 1093 aa16.88■□□□□ 0.29
PRPF8-215ENST00000576958 SMIM5Q71RC9 77 aa16.88■□□□□ 0.29
PRPF8-215ENST00000576958 KLHL34Q8N239 644 aa16.88■□□□□ 0.29
PRPF8-215ENST00000576958 QSER1Q2KHR3 1735 aa16.87■□□□□ 0.29
PRPF8-215ENST00000576958 RTL1A6NKG5 1358 aa16.87■□□□□ 0.29
PRPF8-215ENST00000576958 COL24A1Q17RW2 1714 aa16.87■□□□□ 0.29
PRPF8-215ENST00000576958 NSD3Q9BZ95 1437 aa16.87■□□□□ 0.29
PRPF8-215ENST00000576958 TRIM26Q12899 539 aaPredicted RBP16.86■□□□□ 0.29
PRPF8-215ENST00000576958 AMIGO3Q86WK7 504 aa16.86■□□□□ 0.29
PRPF8-215ENST00000576958 NLGN2Q8NFZ4 835 aa16.86■□□□□ 0.29
PRPF8-215ENST00000576958 MSL1Q68DK7 614 aa16.85■□□□□ 0.29
PRPF8-215ENST00000576958 ZNF784Q8NCA9 323 aaPredicted RBP16.85■□□□□ 0.29
PRPF8-215ENST00000576958 TFCP2L1Q9NZI6 479 aa16.85■□□□□ 0.29
PRPF8-215ENST00000576958 SLC27A3Q5K4L6 730 aa16.84■□□□□ 0.29
PRPF8-215ENST00000576958 CCNL1Q9UK58 526 aaPredicted RBP16.84■□□□□ 0.29
PRPF8-215ENST00000576958 DCAF8L1A6NGE4 600 aa16.83■□□□□ 0.28
PRPF8-215ENST00000576958 CYP27B1O15528 508 aa16.83■□□□□ 0.28
PRPF8-215ENST00000576958 INSRP06213 1382 aa16.83■□□□□ 0.28
PRPF8-215ENST00000576958 COL23A1Q86Y22 540 aaPredicted RBP16.83■□□□□ 0.28
PRPF8-215ENST00000576958 C5P01031 1676 aa16.82■□□□□ 0.28
PRPF8-215ENST00000576958 ITGB4P16144 1822 aa16.82■□□□□ 0.28
PRPF8-215ENST00000576958 FLT4P35916 1363 aa16.81■□□□□ 0.28
PRPF8-215ENST00000576958 PPM1GO15355 546 aaPredicted RBP16.81■□□□□ 0.28
PRPF8-215ENST00000576958 TATP17735 454 aaPredicted RBP16.81■□□□□ 0.28
PRPF8-215ENST00000576958 RAPGEF4Q8WZA2 1011 aa16.81■□□□□ 0.28
PRPF8-215ENST00000576958 MAP3K5Q99683 1374 aa16.8■□□□□ 0.28
PRPF8-215ENST00000576958 TAF1LQ8IZX4 1826 aa16.8■□□□□ 0.28
PRPF8-215ENST00000576958 PKD1L3Q7Z443 1732 aa16.8■□□□□ 0.28
PRPF8-215ENST00000576958 MSH5O43196 834 aa16.8■□□□□ 0.28
PRPF8-215ENST00000576958 MPRIPQ6WCQ1 1025 aa16.8■□□□□ 0.28
PRPF8-215ENST00000576958 PELP1Q8IZL8 1130 aaKnown RBP16.8■□□□□ 0.28
PRPF8-215ENST00000576958 SMG6Q86US8 1419 aaKnown RBP16.79■□□□□ 0.28
PRPF8-215ENST00000576958 ANKRD26Q9UPS8 1709 aa16.79■□□□□ 0.28
PRPF8-215ENST00000576958 CHD4Q14839 1912 aa16.79■□□□□ 0.28
PRPF8-215ENST00000576958 POLR3GLQ9BT43 218 aa16.79■□□□□ 0.28
PRPF8-215ENST00000576958 PCGF6Q9BYE7 350 aa16.78■□□□□ 0.28
PRPF8-215ENST00000576958 PALLDQ8WX93 1383 aa16.77■□□□□ 0.28
PRPF8-215ENST00000576958 MAP2P11137 1827 aaKnown RBP16.77■□□□□ 0.28
PRPF8-215ENST00000576958 YBX3P16989 372 aaKnown RBP eCLIP16.77■□□□□ 0.281e-9■□□□□ 10.6
PRPF8-215ENST00000576958 TNNT2P45379 298 aaPredicted RBP16.77■□□□□ 0.28
PRPF8-215ENST00000576958 GPR162Q16538 588 aa16.77■□□□□ 0.28
PRPF8-215ENST00000576958 PCDH11XQ9BZA7 1347 aa16.76■□□□□ 0.27
PRPF8-215ENST00000576958 PCDH11YQ9BZA8 1340 aa16.76■□□□□ 0.27
PRPF8-215ENST00000576958 NCAPD2Q15021 1401 aa16.76■□□□□ 0.27
PRPF8-215ENST00000576958 POLD1P28340 1107 aa16.75■□□□□ 0.27
PRPF8-215ENST00000576958 SLC16A10Q8TF71 515 aa16.75■□□□□ 0.27
PRPF8-215ENST00000576958 PIGBQ92521 554 aa16.75■□□□□ 0.27
PRPF8-215ENST00000576958 EYA1Q99502 592 aa16.75■□□□□ 0.27
PRPF8-215ENST00000576958 WWC3Q9ULE0 1092 aa16.75■□□□□ 0.27
PRPF8-215ENST00000576958 C4BP0C0L5 1744 aa16.75■□□□□ 0.27
PRPF8-215ENST00000576958 POLKQ9UBT6 870 aa16.74■□□□□ 0.27
PRPF8-215ENST00000576958 CGNL1Q0VF96 1302 aa16.73■□□□□ 0.27
PRPF8-215ENST00000576958 PHF14O94880 888 aa16.73■□□□□ 0.27
PRPF8-215ENST00000576958 UBR3Q6ZT12 1888 aa16.72■□□□□ 0.27
PRPF8-215ENST00000576958 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
PRPF8-215ENST00000576958 LINC00116Q8NCU8 138 aa16.72■□□□□ 0.27
PRPF8-215ENST00000576958 EIF4A2Q14240 407 aaKnown RBP16.71■□□□□ 0.27
PRPF8-215ENST00000576958 CDCA8Q53HL2 280 aa16.71■□□□□ 0.27
PRPF8-215ENST00000576958 ASAP1Q9ULH1 1129 aa16.71■□□□□ 0.27
PRPF8-215ENST00000576958 KIF24Q5T7B8 1368 aa16.71■□□□□ 0.27
PRPF8-215ENST00000576958 WASHC2AQ641Q2 1341 aa16.7■□□□□ 0.26
PRPF8-215ENST00000576958 ITPK1Q13572 414 aa16.7■□□□□ 0.26
PRPF8-215ENST00000576958 HSPA5P11021 654 aaKnown RBP16.69■□□□□ 0.26
PRPF8-215ENST00000576958 NKX1-1Q15270 411 aaPredicted RBP16.68■□□□□ 0.26
PRPF8-215ENST00000576958 PHKG2P15735 406 aa16.67■□□□□ 0.26
PRPF8-215ENST00000576958 SLC4A9Q96Q91 983 aa16.67■□□□□ 0.26
PRPF8-215ENST00000576958 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.66■□□□□ 0.26
PRPF8-215ENST00000576958 AK7Q96M32 723 aa16.66■□□□□ 0.26
PRPF8-215ENST00000576958 PANK3Q9H999 370 aa16.66■□□□□ 0.26
PRPF8-215ENST00000576958 ATG3Q9NT62 314 aa16.66■□□□□ 0.26
PRPF8-215ENST00000576958 LOC102724428A0A0B4J2F2 783 aa16.65■□□□□ 0.26
PRPF8-215ENST00000576958 SIK1P57059 783 aa16.65■□□□□ 0.26
PRPF8-215ENST00000576958 AEBP1Q8IUX7 1158 aa16.65■□□□□ 0.26
PRPF8-215ENST00000576958 SPG7Q9UQ90 795 aa16.65■□□□□ 0.26
PRPF8-215ENST00000576958 C1QTNF8P60827 252 aa16.64■□□□□ 0.25
PRPF8-215ENST00000576958 TMOD3Q9NYL9 352 aa16.64■□□□□ 0.25
PRPF8-215ENST00000576958 SENP3-EIF4A1A0A087X0R7 540 aa16.63■□□□□ 0.25
PRPF8-215ENST00000576958 KDM6AO15550 1401 aaPredicted RBP16.62■□□□□ 0.25
PRPF8-215ENST00000576958 SMARCC1Q92922 1105 aaPredicted RBP16.62■□□□□ 0.25
PRPF8-215ENST00000576958 IGSF1Q8N6C5 1336 aa16.62■□□□□ 0.25
PRPF8-215ENST00000576958 KDRP35968 1356 aa16.62■□□□□ 0.25
PRPF8-215ENST00000576958 GNPATO15228 680 aa16.61■□□□□ 0.25
PRPF8-215ENST00000576958 ATP6V1AP38606 617 aa16.61■□□□□ 0.25
PRPF8-215ENST00000576958 IFNL2Q8IZJ0 200 aa16.61■□□□□ 0.25
PRPF8-215ENST00000576958 CEP350Q5VT06 3117 aa16.6■□□□□ 0.25
PRPF8-215ENST00000576958 ATP10DQ9P241 1426 aa16.6■□□□□ 0.25
PRPF8-215ENST00000576958 KIAA1551Q9HCM1 1747 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms