RNA–Protein interactions for RNA: ENST00000576677.5

TBCD-222, Transcript of tubulin folding cofactor D, human

TSL 1 (best)

Gene TBCD, Length 1,926 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TBCD-222	ENST00000576677	ELL2	O00472	640 aa	Predicted RBP	28.1	■■■□□ 2.09
TBCD-222	ENST00000576677	HTATSF1	O43719	755 aa	Known RBP	28.1	■■■□□ 2.09
TBCD-222	ENST00000576677	IGHD	P01880	384 aa		28.09	■■■□□ 2.09
TBCD-222	ENST00000576677	MRPL50	Q8N5N7	158 aa	Known RBP	28.09	■■■□□ 2.09
TBCD-222	ENST00000576677	DDX19B	Q9UMR2	479 aa		28.08	■■■□□ 2.09
TBCD-222	ENST00000576677	KIAA0232	Q92628	1395 aa		28.07	■■■□□ 2.08
TBCD-222	ENST00000576677	ZBTB7C	A1YPR0	619 aa		28.07	■■■□□ 2.08
TBCD-222	ENST00000576677	SKAP1	Q86WV1	359 aa		28.07	■■■□□ 2.08
TBCD-222	ENST00000576677	NBPF6	Q5VWK0	638 aa		28.06	■■■□□ 2.08
TBCD-222	ENST00000576677	ARHGAP45	Q92619	1136 aa		28.06	■■■□□ 2.08
TBCD-222	ENST00000576677	NBPF4	Q96M43	638 aa		28.06	■■■□□ 2.08
TBCD-222	ENST00000576677	HAP1	P54257	671 aa	Predicted RBP	28.06	■■■□□ 2.08
TBCD-222	ENST00000576677	USHBP1	Q8N6Y0	703 aa		28.06	■■■□□ 2.08
TBCD-222	ENST00000576677	PCDHB15	Q9Y5E8	787 aa		28.06	■■■□□ 2.08
TBCD-222	ENST00000576677	NPHP3	Q7Z494	1330 aa		28.06	■■■□□ 2.08
TBCD-222	ENST00000576677	GNAT3	A8MTJ3	354 aa		28.05	■■■□□ 2.08
TBCD-222	ENST00000576677	ITPRIP	Q8IWB1	547 aa		28.05	■■■□□ 2.08
TBCD-222	ENST00000576677	TMEM57	Q8N5G2	664 aa		28.04	■■■□□ 2.08
TBCD-222	ENST00000576677	LRRC37A3	O60309	1634 aa		28.04	■■■□□ 2.08
TBCD-222	ENST00000576677	XIRP1	Q702N8	1843 aa	Known RBP	28.04	■■■□□ 2.08
TBCD-222	ENST00000576677	MAP3K5	Q99683	1374 aa		28.04	■■■□□ 2.08
TBCD-222	ENST00000576677	MED1	Q15648	1581 aa	Predicted RBP	28.02	■■■□□ 2.08
TBCD-222	ENST00000576677	PLEKHG5	O94827	1062 aa		28.02	■■■□□ 2.08
TBCD-222	ENST00000576677	DDX17	Q92841	729 aa	Known RBP	28.02	■■■□□ 2.08
TBCD-222	ENST00000576677	NCAPD2	Q15021	1401 aa		28	■■■□□ 2.07
TBCD-222	ENST00000576677	KRT24	Q2M2I5	525 aa		28	■■■□□ 2.07
TBCD-222	ENST00000576677	TSPYL4	Q9UJ04	414 aa		27.99	■■■□□ 2.07
TBCD-222	ENST00000576677	PXDN	Q92626	1479 aa		27.99	■■■□□ 2.07
TBCD-222	ENST00000576677	LRRC59	Q96AG4	307 aa	Known RBP	27.98	■■■□□ 2.07
TBCD-222	ENST00000576677	TNS3	Q68CZ2	1445 aa		27.98	■■■□□ 2.07
TBCD-222	ENST00000576677	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	27.97	■■■□□ 2.07
TBCD-222	ENST00000576677	PDE4A	P27815	886 aa		27.97	■■■□□ 2.07
TBCD-222	ENST00000576677	ANKRD24	Q8TF21	1146 aa		27.97	■■■□□ 2.07
TBCD-222	ENST00000576677	RWDD1	Q9H446	243 aa	Predicted RBP	27.97	■■■□□ 2.07
TBCD-222	ENST00000576677	RGPD2	P0DJD1	1756 aa		27.97	■■■□□ 2.07
TBCD-222	ENST00000576677	MIS18A	Q9NYP9	233 aa		27.96	■■■□□ 2.07
TBCD-222	ENST00000576677	ZBTB40	Q9NUA8	1239 aa		27.96	■■■□□ 2.07
TBCD-222	ENST00000576677	AXIN2	Q9Y2T1	843 aa		27.96	■■■□□ 2.07
TBCD-222	ENST00000576677	ABCC4	O15439	1325 aa		27.95	■■■□□ 2.07
TBCD-222	ENST00000576677	IL17RE	Q8NFR9	667 aa		27.95	■■■□□ 2.06
TBCD-222	ENST00000576677	BACH2	Q9BYV9	841 aa		27.95	■■■□□ 2.06
TBCD-222	ENST00000576677	CAMTA1	Q9Y6Y1	1673 aa		27.95	■■■□□ 2.06
TBCD-222	ENST00000576677	API5	Q9BZZ5	524 aa	Known RBP	27.94	■■■□□ 2.06
TBCD-222	ENST00000576677	ZC3H6	P61129	1189 aa	Known RBP	27.92	■■■□□ 2.06
TBCD-222	ENST00000576677	BRINP3	Q76B58	766 aa		27.92	■■■□□ 2.06
TBCD-222	ENST00000576677	BABAM1	Q9NWV8	329 aa		27.92	■■■□□ 2.06
TBCD-222	ENST00000576677	SPATA31A3	Q5VYP0	1347 aa		27.92	■■■□□ 2.06
TBCD-222	ENST00000576677	ERBB3	P21860	1342 aa		27.92	■■■□□ 2.06
TBCD-222	ENST00000576677	RGS3	P49796	1198 aa		27.91	■■■□□ 2.06
TBCD-222	ENST00000576677	CEMIP	Q8WUJ3	1361 aa		27.91	■■■□□ 2.06
TBCD-222	ENST00000576677	CHMP4B	Q9H444	224 aa	Known RBP	27.9	■■■□□ 2.06
TBCD-222	ENST00000576677	HDAC1	Q13547	482 aa	Predicted RBP	27.9	■■■□□ 2.06
TBCD-222	ENST00000576677	TAF7	Q15545	349 aa	Predicted RBP	27.89	■■■□□ 2.06
TBCD-222	ENST00000576677	AMOT	Q4VCS5	1084 aa		27.89	■■■□□ 2.06
TBCD-222	ENST00000576677	PLEKHO1	Q53GL0	409 aa	Predicted RBP	27.88	■■■□□ 2.05
TBCD-222	ENST00000576677	ZBTB7B	O15156	539 aa	Predicted RBP	27.87	■■■□□ 2.05
TBCD-222	ENST00000576677	AKAP4	Q5JQC9	854 aa		27.86	■■■□□ 2.05
TBCD-222	ENST00000576677	SLAIN2	Q9P270	581 aa		27.86	■■■□□ 2.05
TBCD-222	ENST00000576677	CRYBG1	Q9Y4K1	1723 aa		27.86	■■■□□ 2.05
TBCD-222	ENST00000576677	LMO7	Q8WWI1	1683 aa		27.86	■■■□□ 2.05
TBCD-222	ENST00000576677	RGPD5	Q99666	1765 aa		27.86	■■■□□ 2.05
TBCD-222	ENST00000576677	ABCC6	O95255	1503 aa		27.85	■■■□□ 2.05
TBCD-222	ENST00000576677	PTPRC	P08575	1304 aa		27.85	■■■□□ 2.05
TBCD-222	ENST00000576677	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.85	■■■□□ 2.05
TBCD-222	ENST00000576677	RGS12	O14924	1447 aa		27.85	■■■□□ 2.05
TBCD-222	ENST00000576677	SOS1	Q07889	1333 aa	Predicted RBP	27.85	■■■□□ 2.05
TBCD-222	ENST00000576677	CABLES1	Q8TDN4	633 aa		27.84	■■■□□ 2.05
TBCD-222	ENST00000576677	COL18A1	P39060	1754 aa		27.83	■■■□□ 2.05
TBCD-222	ENST00000576677	SLC4A2	P04920	1241 aa		27.82	■■■□□ 2.04
TBCD-222	ENST00000576677	PDZRN3	Q9UPQ7	1066 aa		27.82	■■■□□ 2.04
TBCD-222	ENST00000576677	CPD	O75976	1380 aa		27.82	■■■□□ 2.04
TBCD-222	ENST00000576677	FAM161A	Q3B820	660 aa		27.81	■■■□□ 2.04
TBCD-222	ENST00000576677	LGR6	Q9HBX8	967 aa		27.81	■■■□□ 2.04
TBCD-222	ENST00000576677	SOS2	Q07890	1332 aa	Predicted RBP	27.81	■■■□□ 2.04
TBCD-222	ENST00000576677	INTS3	Q68E01	1043 aa	Known RBP	27.8	■■■□□ 2.04
TBCD-222	ENST00000576677	C1orf141	Q5JVX7	400 aa		27.79	■■■□□ 2.04
TBCD-222	ENST00000576677	OVOS2	A0A0G2JMS6	1433 aa		27.79	■■■□□ 2.04
TBCD-222	ENST00000576677	C8orf34	Q49A92	452 aa		27.79	■■■□□ 2.04
TBCD-222	ENST00000576677	SMC5	Q8IY18	1101 aa		27.78	■■■□□ 2.04
TBCD-222	ENST00000576677	ANP32A	P39687	249 aa	Known RBP	27.77	■■■□□ 2.04
TBCD-222	ENST00000576677	CCDC30	Q5VVM6	783 aa		27.77	■■■□□ 2.04
TBCD-222	ENST00000576677	STK31	Q9BXU1	1019 aa		27.77	■■■□□ 2.04
TBCD-222	ENST00000576677	NLRP2	Q9NX02	1062 aa		27.77	■■■□□ 2.04
TBCD-222	ENST00000576677	FAM208A	Q9UK61	1670 aa	Known RBP	27.75	■■■□□ 2.03
TBCD-222	ENST00000576677	TEF	Q10587	303 aa		27.75	■■■□□ 2.03
TBCD-222	ENST00000576677	CHRNA2	Q15822	529 aa		27.75	■■■□□ 2.03
TBCD-222	ENST00000576677	MPRIP	Q6WCQ1	1025 aa		27.75	■■■□□ 2.03
TBCD-222	ENST00000576677	RNMT	O43148	476 aa	Known RBP	27.75	■■■□□ 2.03
TBCD-222	ENST00000576677	RAPGEF4	Q8WZA2	1011 aa		27.74	■■■□□ 2.03
TBCD-222	ENST00000576677	KDM3B	Q7LBC6	1761 aa		27.74	■■■□□ 2.03
TBCD-222	ENST00000576677	MSH5	O43196	834 aa		27.73	■■■□□ 2.03
TBCD-222	ENST00000576677	G2E3	Q7L622	706 aa		27.73	■■■□□ 2.03
TBCD-222	ENST00000576677	C1orf115	Q9H7X2	142 aa		27.73	■■■□□ 2.03
TBCD-222	ENST00000576677	PLEKHG2	Q9H7P9	1386 aa		27.72	■■■□□ 2.03
TBCD-222	ENST00000576677	CSB-PGBD3	P0DP91	1061 aa		27.72	■■■□□ 2.03
TBCD-222	ENST00000576677	EIF4A1	P60842	406 aa	Known RBP	27.71	■■■□□ 2.03
TBCD-222	ENST00000576677	ADAMTS7	Q9UKP4	1686 aa		27.69	■■■□□ 2.02
TBCD-222	ENST00000576677	BTBD11	A6QL63	1104 aa		27.69	■■■□□ 2.02
TBCD-222	ENST00000576677	HOXB7	P09629	217 aa		27.69	■■■□□ 2.02
TBCD-222	ENST00000576677	TAT	P17735	454 aa	Predicted RBP	27.69	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms