RNA–Protein interactions for RNA: ENST00000576585.1

PRPF8-214, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 2,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-214ENST00000576585 ACEP12821 1306 aa16.68■□□□□ 0.26
PRPF8-214ENST00000576585 KIF1AQ12756 1690 aa16.68■□□□□ 0.26
PRPF8-214ENST00000576585 RBM27Q9P2N5 1060 aaKnown RBP16.68■□□□□ 0.26
PRPF8-214ENST00000576585 ADAMTS8Q9UP79 889 aa16.68■□□□□ 0.26
PRPF8-214ENST00000576585 NBPF20Q3BBV1 942 aa16.67■□□□□ 0.26
PRPF8-214ENST00000576585 ESCO1Q5FWF5 840 aa16.67■□□□□ 0.26
PRPF8-214ENST00000576585 GORABQ5T7V8 394 aa16.67■□□□□ 0.26
PRPF8-214ENST00000576585 PMFBP1Q8TBY8 1022 aa16.67■□□□□ 0.26
PRPF8-214ENST00000576585 CERKQ8TCT0 537 aa16.67■□□□□ 0.26
PRPF8-214ENST00000576585 MKRN3Q13064 507 aaKnown RBP16.66■□□□□ 0.26
PRPF8-214ENST00000576585 KIF20BQ96Q89 1820 aa16.66■□□□□ 0.26
PRPF8-214ENST00000576585 SPINK5Q9NQ38 1064 aaPredicted RBP16.65■□□□□ 0.26
PRPF8-214ENST00000576585 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
PRPF8-214ENST00000576585 ANKRD26Q9UPS8 1709 aa16.65■□□□□ 0.26
PRPF8-214ENST00000576585 MTHFSP49914 203 aa16.65■□□□□ 0.26
PRPF8-214ENST00000576585 WDR43Q15061 677 aaKnown RBP eCLIP16.65■□□□□ 0.26
PRPF8-214ENST00000576585 BLMP54132 1417 aaPredicted RBP16.64■□□□□ 0.25
PRPF8-214ENST00000576585 NRKQ7Z2Y5 1582 aa16.64■□□□□ 0.25
PRPF8-214ENST00000576585 USP6P35125 1406 aa16.64■□□□□ 0.25
PRPF8-214ENST00000576585 EDC4Q6P2E9 1401 aaKnown RBP16.64■□□□□ 0.25
PRPF8-214ENST00000576585 CASC1Q6TDU7 716 aa16.64■□□□□ 0.25
PRPF8-214ENST00000576585 VASPP50552 380 aaPredicted RBP16.63■□□□□ 0.25
PRPF8-214ENST00000576585 MYBPC2Q14324 1141 aa16.63■□□□□ 0.25
PRPF8-214ENST00000576585 BRINP3Q76B58 766 aa16.63■□□□□ 0.25
PRPF8-214ENST00000576585 NGDNQ8NEJ9 315 aaKnown RBP16.63■□□□□ 0.25
PRPF8-214ENST00000576585 SUGT1Q9Y2Z0 365 aa16.63■□□□□ 0.25
PRPF8-214ENST00000576585 NME9Q86XW9 330 aa16.62■□□□□ 0.25
PRPF8-214ENST00000576585 CEP120Q8N960 986 aa16.62■□□□□ 0.25
PRPF8-214ENST00000576585 MYCNP04198 464 aaPredicted RBP16.62■□□□□ 0.25
PRPF8-214ENST00000576585 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
PRPF8-214ENST00000576585 INSRP06213 1382 aa16.61■□□□□ 0.25
PRPF8-214ENST00000576585 IRF5Q13568 498 aa16.61■□□□□ 0.25
PRPF8-214ENST00000576585 RBM26Q5T8P6 1007 aaKnown RBP16.61■□□□□ 0.25
PRPF8-214ENST00000576585 FBLN1P23142 703 aa16.6■□□□□ 0.25
PRPF8-214ENST00000576585 PSEN1P49768 467 aa16.6■□□□□ 0.25
PRPF8-214ENST00000576585 HSP90AA2PQ14568 343 aaPredicted RBP16.6■□□□□ 0.25
PRPF8-214ENST00000576585 FOXO3O43524 673 aa16.6■□□□□ 0.25
PRPF8-214ENST00000576585 TOM1O60784 492 aa16.6■□□□□ 0.25
PRPF8-214ENST00000576585 SHPRHQ149N8 1683 aa16.59■□□□□ 0.25
PRPF8-214ENST00000576585 TRPM3Q9HCF6 1732 aaPredicted RBP16.59■□□□□ 0.25
PRPF8-214ENST00000576585 TTC21BQ7Z4L5 1316 aa16.59■□□□□ 0.25
PRPF8-214ENST00000576585 TRIM44Q96DX7 344 aaPredicted RBP16.59■□□□□ 0.25
PRPF8-214ENST00000576585 NHSL1Q5SYE7 1610 aa16.59■□□□□ 0.25
PRPF8-214ENST00000576585 CCDC96Q2M329 555 aa16.58■□□□□ 0.25
PRPF8-214ENST00000576585 GPBP1L1Q9HC44 474 aaPredicted RBP16.58■□□□□ 0.25
PRPF8-214ENST00000576585 ROBO1Q9Y6N7 1651 aa16.58■□□□□ 0.24
PRPF8-214ENST00000576585 CCDC146Q8IYE0 955 aa16.58■□□□□ 0.24
PRPF8-214ENST00000576585 PXDNQ92626 1479 aa16.57■□□□□ 0.24
PRPF8-214ENST00000576585 NPHP3Q7Z494 1330 aa16.57■□□□□ 0.24
PRPF8-214ENST00000576585 TESPA1A2RU30 521 aaPredicted RBP16.57■□□□□ 0.24
PRPF8-214ENST00000576585 RGL2O15211 777 aa16.57■□□□□ 0.24
PRPF8-214ENST00000576585 PSME1Q06323 249 aa16.57■□□□□ 0.24
PRPF8-214ENST00000576585 TTC21AQ8NDW8 1320 aa16.57■□□□□ 0.24
PRPF8-214ENST00000576585 KRT28Q7Z3Y7 464 aa16.57■□□□□ 0.24
PRPF8-214ENST00000576585 ZC3H4Q9UPT8 1303 aaKnown RBP16.56■□□□□ 0.24
PRPF8-214ENST00000576585 CFAP53Q96M91 514 aa16.56■□□□□ 0.24
PRPF8-214ENST00000576585 ECM2O94769 699 aaPredicted RBP16.55■□□□□ 0.24
PRPF8-214ENST00000576585 DDX17Q92841 729 aaKnown RBP16.55■□□□□ 0.24
PRPF8-214ENST00000576585 SOS2Q07890 1332 aaPredicted RBP16.55■□□□□ 0.24
PRPF8-214ENST00000576585 UBAP1LF5GYI3 381 aa16.55■□□□□ 0.24
PRPF8-214ENST00000576585 EGFL6Q8IUX8 553 aa16.55■□□□□ 0.24
PRPF8-214ENST00000576585 RETREG2Q8NC44 543 aa16.55■□□□□ 0.24
PRPF8-214ENST00000576585 SBNO1A3KN83 1393 aa16.55■□□□□ 0.24
PRPF8-214ENST00000576585 AHDC1Q5TGY3 1603 aaPredicted RBP16.54■□□□□ 0.24
PRPF8-214ENST00000576585 MTA3Q9BTC8 594 aa16.54■□□□□ 0.24
PRPF8-214ENST00000576585 USP54Q70EL1 1684 aa16.54■□□□□ 0.24
PRPF8-214ENST00000576585 ERCC3P19447 782 aa16.54■□□□□ 0.24
PRPF8-214ENST00000576585 FOXD4Q12950 439 aaPredicted RBP16.54■□□□□ 0.24
PRPF8-214ENST00000576585 PIK3C2AO00443 1686 aa16.54■□□□□ 0.24
PRPF8-214ENST00000576585 USP31Q70CQ4 1352 aa16.54■□□□□ 0.24
PRPF8-214ENST00000576585 ALS2Q96Q42 1657 aa16.53■□□□□ 0.24
PRPF8-214ENST00000576585 EVI5LQ96CN4 794 aa16.53■□□□□ 0.24
PRPF8-214ENST00000576585 COG3Q96JB2 828 aa16.53■□□□□ 0.24
PRPF8-214ENST00000576585 POLKQ9UBT6 870 aa16.53■□□□□ 0.24
PRPF8-214ENST00000576585 SUPT16HQ9Y5B9 1047 aaKnown RBP16.53■□□□□ 0.24
PRPF8-214ENST00000576585 COL3A1P02461 1466 aaPredicted RBP16.53■□□□□ 0.24
PRPF8-214ENST00000576585 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
PRPF8-214ENST00000576585 XPCQ01831 940 aaPredicted RBP16.53■□□□□ 0.24
PRPF8-214ENST00000576585 IGSF5Q9NSI5 407 aa16.53■□□□□ 0.24
PRPF8-214ENST00000576585 RPS6KL1Q9Y6S9 549 aa16.53■□□□□ 0.24
PRPF8-214ENST00000576585 MAP2P11137 1827 aaKnown RBP16.53■□□□□ 0.24
PRPF8-214ENST00000576585 MARF1Q9Y4F3 1742 aaKnown RBP16.52■□□□□ 0.24
PRPF8-214ENST00000576585 ANKRD62A6NC57 917 aa16.52■□□□□ 0.24
PRPF8-214ENST00000576585 RIOK3O14730 519 aaKnown RBP16.52■□□□□ 0.24
PRPF8-214ENST00000576585 UNCXA6NJT0 531 aa16.51■□□□□ 0.23
PRPF8-214ENST00000576585 APAF1O14727 1248 aa16.51■□□□□ 0.23
PRPF8-214ENST00000576585 CARD10Q9BWT7 1032 aa16.51■□□□□ 0.23
PRPF8-214ENST00000576585 WDR70Q9NW82 654 aa16.51■□□□□ 0.23
PRPF8-214ENST00000576585 CDCA7LQ96GN5 454 aa16.51■□□□□ 0.23
PRPF8-214ENST00000576585 NUDCQ9Y266 331 aa16.51■□□□□ 0.23
PRPF8-214ENST00000576585 EMILIN1Q9Y6C2 1016 aa16.51■□□□□ 0.23
PRPF8-214ENST00000576585 OVOS2A0A0J9YW53 1432 aa16.51■□□□□ 0.23
PRPF8-214ENST00000576585 OVOS2Q6IE36 1432 aa16.51■□□□□ 0.23
PRPF8-214ENST00000576585 SPATA31A3Q5VYP0 1347 aa16.5■□□□□ 0.23
PRPF8-214ENST00000576585 PNPLA6Q8IY17 1366 aa16.5■□□□□ 0.23
PRPF8-214ENST00000576585 BARGINQ6ZT62 677 aa16.5■□□□□ 0.23
PRPF8-214ENST00000576585 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.5■□□□□ 0.23
PRPF8-214ENST00000576585 TMEM51Q9NW97 253 aa16.5■□□□□ 0.23
PRPF8-214ENST00000576585 PAK3O75914 559 aaPredicted RBP16.49■□□□□ 0.23
PRPF8-214ENST00000576585 U2AF1L5P0DN76 240 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms