RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 INSRP06213 1382 aa16.45■□□□□ 0.22
LITAF-219ENST00000576334 FLT4P35916 1363 aa16.45■□□□□ 0.22
LITAF-219ENST00000576334 CGNL1Q0VF96 1302 aa16.45■□□□□ 0.22
LITAF-219ENST00000576334 DOT1LQ8TEK3 1739 aa16.43■□□□□ 0.22
LITAF-219ENST00000576334 ZCRB1Q8TBF4 217 aaKnown RBP16.43■□□□□ 0.22
LITAF-219ENST00000576334 ANKRD26Q9UPS8 1709 aa16.42■□□□□ 0.22
LITAF-219ENST00000576334 POLKQ9UBT6 870 aa16.42■□□□□ 0.22
LITAF-219ENST00000576334 SMG6Q86US8 1419 aaKnown RBP16.42■□□□□ 0.22
LITAF-219ENST00000576334 PRIM1P49642 420 aaKnown RBP16.41■□□□□ 0.22
LITAF-219ENST00000576334 KCNQ4P56696 695 aa16.41■□□□□ 0.22
LITAF-219ENST00000576334 SYTL4Q96C24 671 aaPredicted RBP16.41■□□□□ 0.22
LITAF-219ENST00000576334 LRRC4BQ9NT99 713 aa16.4■□□□□ 0.22
LITAF-219ENST00000576334 CASZ1Q86V15 1759 aa16.39■□□□□ 0.21
LITAF-219ENST00000576334 RAPGEF4Q8WZA2 1011 aa16.39■□□□□ 0.21
LITAF-219ENST00000576334 KIF7Q2M1P5 1343 aa16.39■□□□□ 0.21
LITAF-219ENST00000576334 NSD2O96028 1365 aa16.38■□□□□ 0.21
LITAF-219ENST00000576334 KIF24Q5T7B8 1368 aa16.38■□□□□ 0.21
LITAF-219ENST00000576334 TATP17735 454 aaPredicted RBP16.38■□□□□ 0.21
LITAF-219ENST00000576334 WASHC2AQ641Q2 1341 aa16.38■□□□□ 0.21
LITAF-219ENST00000576334 ZBTB7AO95365 584 aa16.37■□□□□ 0.21
LITAF-219ENST00000576334 SLC15A2Q16348 729 aa16.37■□□□□ 0.21
LITAF-219ENST00000576334 EYA1Q99502 592 aa16.37■□□□□ 0.21
LITAF-219ENST00000576334 PAPPAQ13219 1627 aa16.37■□□□□ 0.21
LITAF-219ENST00000576334 CYP27B1O15528 508 aa16.36■□□□□ 0.21
LITAF-219ENST00000576334 EIF4A2Q14240 407 aaKnown RBP16.36■□□□□ 0.21
LITAF-219ENST00000576334 ZNF827Q17R98 1081 aa16.36■□□□□ 0.21
LITAF-219ENST00000576334 STK32BQ9NY57 414 aa16.36■□□□□ 0.21
LITAF-219ENST00000576334 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
LITAF-219ENST00000576334 TOGARAM1Q9Y4F4 1720 aa16.34■□□□□ 0.21
LITAF-219ENST00000576334 SPON1Q9HCB6 807 aa16.34■□□□□ 0.21
LITAF-219ENST00000576334 NCAPD2Q15021 1401 aa16.34■□□□□ 0.21
LITAF-219ENST00000576334 PKD1L3Q7Z443 1732 aa16.33■□□□□ 0.2
LITAF-219ENST00000576334 LY75O60449 1722 aa16.32■□□□□ 0.2
LITAF-219ENST00000576334 MORC1Q86VD1 984 aa16.32■□□□□ 0.2
LITAF-219ENST00000576334 PCDH11XQ9BZA7 1347 aa16.32■□□□□ 0.2
LITAF-219ENST00000576334 PCDH11YQ9BZA8 1340 aa16.32■□□□□ 0.2
LITAF-219ENST00000576334 CNGB1Q14028 1251 aaPredicted RBP16.31■□□□□ 0.2
LITAF-219ENST00000576334 AMER1Q5JTC6 1135 aaPredicted RBP16.31■□□□□ 0.2
LITAF-219ENST00000576334 ITGB4P16144 1822 aa16.31■□□□□ 0.2
LITAF-219ENST00000576334 TUBGCP6Q96RT7 1819 aa16.31■□□□□ 0.2
LITAF-219ENST00000576334 PTGER2P43116 358 aa16.3■□□□□ 0.2
LITAF-219ENST00000576334 MPRIPQ6WCQ1 1025 aa16.3■□□□□ 0.2
LITAF-219ENST00000576334 AKT1S1Q96B36 256 aa16.3■□□□□ 0.2
LITAF-219ENST00000576334 PPP1R1BQ9UD71 204 aaPredicted RBP16.3■□□□□ 0.2
LITAF-219ENST00000576334 KNSTRNQ9Y448 316 aa16.3■□□□□ 0.2
LITAF-219ENST00000576334 PER1O15534 1290 aaPredicted RBP16.28■□□□□ 0.2
LITAF-219ENST00000576334 AEBP1Q8IUX7 1158 aa16.28■□□□□ 0.2
LITAF-219ENST00000576334 IGSF1Q8N6C5 1336 aa16.27■□□□□ 0.2
LITAF-219ENST00000576334 CC2D1BQ5T0F9 858 aaKnown RBP16.27■□□□□ 0.2
LITAF-219ENST00000576334 CCNL1Q9UK58 526 aaPredicted RBP16.27■□□□□ 0.2
LITAF-219ENST00000576334 SLC27A3Q5K4L6 730 aa16.26■□□□□ 0.19
LITAF-219ENST00000576334 PIGBQ92521 554 aa16.26■□□□□ 0.19
LITAF-219ENST00000576334 SPG7Q9UQ90 795 aa16.26■□□□□ 0.19
LITAF-219ENST00000576334 PNPLA7Q6ZV29 1317 aa16.25■□□□□ 0.19
LITAF-219ENST00000576334 SGIP1Q9BQI5 828 aa16.25■□□□□ 0.19
LITAF-219ENST00000576334 PHKG2P15735 406 aa16.24■□□□□ 0.19
LITAF-219ENST00000576334 NKX1-1Q15270 411 aaPredicted RBP16.24■□□□□ 0.19
LITAF-219ENST00000576334 SMIM5Q71RC9 77 aa16.24■□□□□ 0.19
LITAF-219ENST00000576334 MTFR1LQ9H019 292 aa16.24■□□□□ 0.19
LITAF-219ENST00000576334 TFCP2L1Q9NZI6 479 aa16.24■□□□□ 0.19
LITAF-219ENST00000576334 PALLDQ8WX93 1383 aa16.24■□□□□ 0.19
LITAF-219ENST00000576334 TAF1LQ8IZX4 1826 aa16.22■□□□□ 0.19
LITAF-219ENST00000576334 C5P01031 1676 aa16.22■□□□□ 0.19
LITAF-219ENST00000576334 IL13P35225 146 aa16.22■□□□□ 0.19
LITAF-219ENST00000576334 MTHFSP49914 203 aa16.22■□□□□ 0.19
LITAF-219ENST00000576334 IFNL2Q8IZJ0 200 aa16.22■□□□□ 0.19
LITAF-219ENST00000576334 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.22■□□□□ 0.19
LITAF-219ENST00000576334 ASAP1Q9ULH1 1129 aa16.22■□□□□ 0.19
LITAF-219ENST00000576334 QSER1Q2KHR3 1735 aa16.22■□□□□ 0.19
LITAF-219ENST00000576334 UTRNP46939 3433 aa16.21■□□□□ 0.19
LITAF-219ENST00000576334 SULT6B1Q6IMI4 303 aa16.21■□□□□ 0.19
LITAF-219ENST00000576334 AMIGO3Q86WK7 504 aa16.21■□□□□ 0.19
LITAF-219ENST00000576334 FHDC1Q9C0D6 1143 aaPredicted RBP16.2■□□□□ 0.18
LITAF-219ENST00000576334 COL23A1Q86Y22 540 aaPredicted RBP16.19■□□□□ 0.18
LITAF-219ENST00000576334 TMOD3Q9NYL9 352 aa16.19■□□□□ 0.18
LITAF-219ENST00000576334 MSH5O43196 834 aa16.18■□□□□ 0.18
LITAF-219ENST00000576334 ZNF530Q6P9A1 599 aaPredicted RBP16.18■□□□□ 0.18
LITAF-219ENST00000576334 KDM6AO15550 1401 aaPredicted RBP16.18■□□□□ 0.18
LITAF-219ENST00000576334 C4BP0C0L5 1744 aa16.17■□□□□ 0.18
LITAF-219ENST00000576334 HMOX1P09601 288 aa16.17■□□□□ 0.18
LITAF-219ENST00000576334 PLEKHO1Q53GL0 409 aaPredicted RBP16.17■□□□□ 0.18
LITAF-219ENST00000576334 MSL1Q68DK7 614 aa16.17■□□□□ 0.18
LITAF-219ENST00000576334 ARXQ96QS3 562 aa16.17■□□□□ 0.18
LITAF-219ENST00000576334 SYT17Q9BSW7 474 aa16.17■□□□□ 0.18
LITAF-219ENST00000576334 ATG3Q9NT62 314 aa16.17■□□□□ 0.18
LITAF-219ENST00000576334 GOLGB1Q14789 3259 aaKnown RBP16.17■□□□□ 0.18
LITAF-219ENST00000576334 ITPK1Q13572 414 aa16.16■□□□□ 0.18
LITAF-219ENST00000576334 LINC00116Q8NCU8 138 aa16.16■□□□□ 0.18
LITAF-219ENST00000576334 SMARCC1Q92922 1105 aaPredicted RBP16.16■□□□□ 0.18
LITAF-219ENST00000576334 COL24A1Q17RW2 1714 aa16.16■□□□□ 0.18
LITAF-219ENST00000576334 KDRP35968 1356 aa16.15■□□□□ 0.18
LITAF-219ENST00000576334 LOC102724428A0A0B4J2F2 783 aa16.15■□□□□ 0.18
LITAF-219ENST00000576334 SIK1P57059 783 aa16.15■□□□□ 0.18
LITAF-219ENST00000576334 KLHL34Q8N239 644 aa16.15■□□□□ 0.18
LITAF-219ENST00000576334 PHF14O94880 888 aa16.14■□□□□ 0.17
LITAF-219ENST00000576334 SLC4A9Q96Q91 983 aa16.14■□□□□ 0.17
LITAF-219ENST00000576334 UBR3Q6ZT12 1888 aa16.14■□□□□ 0.17
LITAF-219ENST00000576334 SLC16A10Q8TF71 515 aa16.13■□□□□ 0.17
LITAF-219ENST00000576334 DCAF5Q96JK2 942 aa16.13■□□□□ 0.17
LITAF-219ENST00000576334 COL3A1P02461 1466 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms