RNA–Protein interactions for RNA: ENST00000576209.5

ACTG1-212, Transcript of actin gamma 1, humanhuman

TSL 1 (best)

Gene ACTG1, Length 1,698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-212ENST00000576209 NCAPD2Q15021 1401 aa16.09■□□□□ 0.17
ACTG1-212ENST00000576209 FCHSD2O94868 740 aa16.08■□□□□ 0.17
ACTG1-212ENST00000576209 SEPT12Q8IYM1 358 aa16.08■□□□□ 0.17
ACTG1-212ENST00000576209 PARP4Q9UKK3 1724 aaKnown RBP16.08■□□□□ 0.16
ACTG1-212ENST00000576209 KDRP35968 1356 aa16.08■□□□□ 0.16
ACTG1-212ENST00000576209 SENP3-EIF4A1A0A087X0R7 540 aa16.08■□□□□ 0.16
ACTG1-212ENST00000576209 EXOC5O00471 708 aa16.07■□□□□ 0.16
ACTG1-212ENST00000576209 DDB1Q16531 1140 aa16.07■□□□□ 0.16
ACTG1-212ENST00000576209 ZCRB1Q8TBF4 217 aaKnown RBP16.07■□□□□ 0.16
ACTG1-212ENST00000576209 DDX54Q8TDD1 881 aaKnown RBP16.07■□□□□ 0.16
ACTG1-212ENST00000576209 CDCA7Q9BWT1 371 aaPredicted RBP16.07■□□□□ 0.16
ACTG1-212ENST00000576209 DISP2A7MBM2 1401 aa16.07■□□□□ 0.16
ACTG1-212ENST00000576209 NEFMP07197 916 aa16.06■□□□□ 0.16
ACTG1-212ENST00000576209 PHACTR3Q96KR7 559 aa16.06■□□□□ 0.16
ACTG1-212ENST00000576209 PNNQ9H307 717 aaKnown RBP16.06■□□□□ 0.16
ACTG1-212ENST00000576209 MAPK8IP3Q9UPT6 1336 aa16.06■□□□□ 0.16
ACTG1-212ENST00000576209 PLEKHO1Q53GL0 409 aaPredicted RBP16.05■□□□□ 0.16
ACTG1-212ENST00000576209 OVOS2A0A0G2JMS6 1433 aa16.05■□□□□ 0.16
ACTG1-212ENST00000576209 ONECUT3O60422 494 aaPredicted RBP16.05■□□□□ 0.16
ACTG1-212ENST00000576209 PDE3BQ13370 1112 aa16.05■□□□□ 0.16
ACTG1-212ENST00000576209 SPG7Q9UQ90 795 aa16.05■□□□□ 0.16
ACTG1-212ENST00000576209 THSD7AQ9UPZ6 1657 aa16.04■□□□□ 0.16
ACTG1-212ENST00000576209 RGS12O14924 1447 aa16.04■□□□□ 0.16
ACTG1-212ENST00000576209 MTHFSDQ2M296 383 aaKnown RBP16.04■□□□□ 0.16
ACTG1-212ENST00000576209 PLEKHF1Q96S99 279 aa16.04■□□□□ 0.16
ACTG1-212ENST00000576209 LRRC37A3O60309 1634 aa16.04■□□□□ 0.16
ACTG1-212ENST00000576209 BRWD3Q6RI45 1802 aa16.03■□□□□ 0.16
ACTG1-212ENST00000576209 FAM182BQ5T319 152 aa16.03■□□□□ 0.16
ACTG1-212ENST00000576209 ZNF530Q6P9A1 599 aaPredicted RBP16.03■□□□□ 0.16
ACTG1-212ENST00000576209 AMOTQ4VCS5 1084 aa16.02■□□□□ 0.16
ACTG1-212ENST00000576209 RUNDC1Q96C34 613 aa16.02■□□□□ 0.16
ACTG1-212ENST00000576209 NEUROD2Q15784 382 aa16.02■□□□□ 0.15
ACTG1-212ENST00000576209 RRP7AQ9Y3A4 280 aaKnown RBP16.02■□□□□ 0.15
ACTG1-212ENST00000576209 TNS2Q63HR2 1409 aa16.01■□□□□ 0.15
ACTG1-212ENST00000576209 PKD1L3Q7Z443 1732 aa16.01■□□□□ 0.15
ACTG1-212ENST00000576209 PCDH11XQ9BZA7 1347 aa16■□□□□ 0.15
ACTG1-212ENST00000576209 PCDH11YQ9BZA8 1340 aa16■□□□□ 0.15
ACTG1-212ENST00000576209 SHANK3Q9BYB0 1731 aa16■□□□□ 0.15
ACTG1-212ENST00000576209 C1orf141Q5JVX7 400 aa16■□□□□ 0.15
ACTG1-212ENST00000576209 KRT27Q7Z3Y8 459 aa16■□□□□ 0.15
ACTG1-212ENST00000576209 MARCH10Q8NA82 808 aaPredicted RBP16■□□□□ 0.15
ACTG1-212ENST00000576209 APAF1O14727 1248 aa15.99■□□□□ 0.15
ACTG1-212ENST00000576209 CYP27B1O15528 508 aa15.99■□□□□ 0.15
ACTG1-212ENST00000576209 GAS2L2Q8NHY3 880 aa15.99■□□□□ 0.15
ACTG1-212ENST00000576209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.99■□□□□ 0.15
ACTG1-212ENST00000576209 SALL2Q9Y467 1007 aaPredicted RBP15.99■□□□□ 0.15
ACTG1-212ENST00000576209 PHKG2P15735 406 aa15.99■□□□□ 0.15
ACTG1-212ENST00000576209 IFNL2Q8IZJ0 200 aa15.99■□□□□ 0.15
ACTG1-212ENST00000576209 NFE2L2Q16236 605 aa15.98■□□□□ 0.15
ACTG1-212ENST00000576209 AKAP4Q5JQC9 854 aa15.97■□□□□ 0.15
ACTG1-212ENST00000576209 MPRIPQ6WCQ1 1025 aa15.97■□□□□ 0.15
ACTG1-212ENST00000576209 TMPOP42166 694 aaKnown RBP15.96■□□□□ 0.15
ACTG1-212ENST00000576209 RIPK4P57078 832 aa15.96■□□□□ 0.15
ACTG1-212ENST00000576209 DLG5Q8TDM6 1919 aa15.96■□□□□ 0.14
ACTG1-212ENST00000576209 GNAT3A8MTJ3 354 aa15.95■□□□□ 0.14
ACTG1-212ENST00000576209 ACSBG1Q96GR2 724 aa15.95■□□□□ 0.14
ACTG1-212ENST00000576209 KAT6BQ8WYB5 2073 aa15.95■□□□□ 0.14
ACTG1-212ENST00000576209 DCTN1Q14203 1278 aa15.95■□□□□ 0.14
ACTG1-212ENST00000576209 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
ACTG1-212ENST00000576209 YTHDC1Q96MU7 727 aaKnown RBP15.95■□□□□ 0.14
ACTG1-212ENST00000576209 MAP3K5Q99683 1374 aa15.94■□□□□ 0.14
ACTG1-212ENST00000576209 SYTL4Q96C24 671 aaPredicted RBP15.94■□□□□ 0.14
ACTG1-212ENST00000576209 PLEKHG2Q9H7P9 1386 aa15.94■□□□□ 0.14
ACTG1-212ENST00000576209 MCM10Q7L590 875 aa15.93■□□□□ 0.14
ACTG1-212ENST00000576209 LGR6Q9HBX8 967 aa15.93■□□□□ 0.14
ACTG1-212ENST00000576209 HSP90AB1P08238 724 aaKnown RBP15.92■□□□□ 0.14
ACTG1-212ENST00000576209 VIRMAQ69YN4 1812 aaKnown RBP15.92■□□□□ 0.14
ACTG1-212ENST00000576209 DCAF5Q96JK2 942 aa15.92■□□□□ 0.14
ACTG1-212ENST00000576209 THUMPD2Q9BTF0 503 aaKnown RBP15.92■□□□□ 0.14
ACTG1-212ENST00000576209 RNMTO43148 476 aaKnown RBP15.91■□□□□ 0.14
ACTG1-212ENST00000576209 FAM196AQ6ZSG2 479 aa15.91■□□□□ 0.14
ACTG1-212ENST00000576209 IL17REQ8NFR9 667 aa15.91■□□□□ 0.14
ACTG1-212ENST00000576209 DOT1LQ8TEK3 1739 aa15.91■□□□□ 0.14
ACTG1-212ENST00000576209 KDM6AO15550 1401 aaPredicted RBP15.9■□□□□ 0.14
ACTG1-212ENST00000576209 KCNQ2O43526 872 aa15.9■□□□□ 0.14
ACTG1-212ENST00000576209 PRIM1P49642 420 aaKnown RBP15.9■□□□□ 0.14
ACTG1-212ENST00000576209 NKX1-1Q15270 411 aaPredicted RBP15.9■□□□□ 0.14
ACTG1-212ENST00000576209 ILDR2Q71H61 639 aa15.9■□□□□ 0.14
ACTG1-212ENST00000576209 CABP4P57796 275 aa15.89■□□□□ 0.13
ACTG1-212ENST00000576209 HNRNPUQ00839 825 aaKnown RBP eCLIP15.89■□□□□ 0.13
ACTG1-212ENST00000576209 TRIM35Q9UPQ4 493 aa15.89■□□□□ 0.13
ACTG1-212ENST00000576209 SCN11AQ9UI33 1791 aa15.89■□□□□ 0.13
ACTG1-212ENST00000576209 TOGARAM1Q9Y4F4 1720 aa15.89■□□□□ 0.13
ACTG1-212ENST00000576209 TRIM37O94972 964 aa15.89■□□□□ 0.13
ACTG1-212ENST00000576209 LMOD3Q0VAK6 560 aa15.89■□□□□ 0.13
ACTG1-212ENST00000576209 HTATSF1O43719 755 aaKnown RBP15.88■□□□□ 0.13
ACTG1-212ENST00000576209 TEFQ10587 303 aa15.88■□□□□ 0.13
ACTG1-212ENST00000576209 PTF1AQ7RTS3 328 aa15.87■□□□□ 0.13
ACTG1-212ENST00000576209 NFATC2IPQ8NCF5 419 aa15.87■□□□□ 0.13
ACTG1-212ENST00000576209 TMOD3Q9NYL9 352 aa15.87■□□□□ 0.13
ACTG1-212ENST00000576209 LAS1LQ9Y4W2 734 aaKnown RBP15.87■□□□□ 0.13
ACTG1-212ENST00000576209 ITGB4P16144 1822 aa15.87■□□□□ 0.13
ACTG1-212ENST00000576209 SBF2Q86WG5 1849 aa15.87■□□□□ 0.13
ACTG1-212ENST00000576209 ERVV-2B6SEH9 535 aa15.86■□□□□ 0.13
ACTG1-212ENST00000576209 EP400Q96L91 3159 aa15.85■□□□□ 0.13
ACTG1-212ENST00000576209 WWC1Q8IX03 1113 aa15.85■□□□□ 0.13
ACTG1-212ENST00000576209 SLC52A2Q9HAB3 445 aa15.85■□□□□ 0.13
ACTG1-212ENST00000576209 MIS18AQ9NYP9 233 aa15.85■□□□□ 0.13
ACTG1-212ENST00000576209 PIGBQ92521 554 aa15.84■□□□□ 0.13
ACTG1-212ENST00000576209 NHSQ6T4R5 1651 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms