RNA–Protein interactions for RNA: ENST00000575836.1

TNFRSF12A-207, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 3

Gene TNFRSF12A, Length 161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-207ENST00000575836 EP400Q96L91 3159 aa20.75■□□□□ 0.91
TNFRSF12A-207ENST00000575836 TRIM37O94972 964 aa20.74■□□□□ 0.91
TNFRSF12A-207ENST00000575836 PLEKHG2Q9H7P9 1386 aa20.72■□□□□ 0.91
TNFRSF12A-207ENST00000575836 SULT6B1Q6IMI4 303 aa20.72■□□□□ 0.91
TNFRSF12A-207ENST00000575836 SPG7Q9UQ90 795 aa20.72■□□□□ 0.91
TNFRSF12A-207ENST00000575836 RGPD1P0DJD0 1748 aa20.72■□□□□ 0.91
TNFRSF12A-207ENST00000575836 PCDH11XQ9BZA7 1347 aa20.72■□□□□ 0.91
TNFRSF12A-207ENST00000575836 PCDH11YQ9BZA8 1340 aa20.72■□□□□ 0.91
TNFRSF12A-207ENST00000575836 BAG6P46379 1132 aa20.71■□□□□ 0.91
TNFRSF12A-207ENST00000575836 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.71■□□□□ 0.91
TNFRSF12A-207ENST00000575836 COL3A1P02461 1466 aaPredicted RBP20.7■□□□□ 0.9
TNFRSF12A-207ENST00000575836 AEBP1Q8IUX7 1158 aa20.69■□□□□ 0.9
TNFRSF12A-207ENST00000575836 NUDCQ9Y266 331 aa20.69■□□□□ 0.9
TNFRSF12A-207ENST00000575836 KDRP35968 1356 aa20.69■□□□□ 0.9
TNFRSF12A-207ENST00000575836 U2SURPO15042 1029 aaKnown RBP20.68■□□□□ 0.9
TNFRSF12A-207ENST00000575836 BCL11BQ9C0K0 894 aaPredicted RBP20.68■□□□□ 0.9
TNFRSF12A-207ENST00000575836 APBA3O96018 575 aa20.67■□□□□ 0.9
TNFRSF12A-207ENST00000575836 AMOTQ4VCS5 1084 aa20.67■□□□□ 0.9
TNFRSF12A-207ENST00000575836 PLEKHO1Q53GL0 409 aaPredicted RBP20.67■□□□□ 0.9
TNFRSF12A-207ENST00000575836 PKD1L3Q7Z443 1732 aa20.67■□□□□ 0.9
TNFRSF12A-207ENST00000575836 DEFB132Q7Z7B7 95 aa20.66■□□□□ 0.9
TNFRSF12A-207ENST00000575836 SHANK3Q9BYB0 1731 aa20.66■□□□□ 0.9
TNFRSF12A-207ENST00000575836 SBF2Q86WG5 1849 aa20.65■□□□□ 0.9
TNFRSF12A-207ENST00000575836 TNS1Q9HBL0 1735 aaKnown RBP20.65■□□□□ 0.9
TNFRSF12A-207ENST00000575836 MYBBP1AQ9BQG0 1328 aaKnown RBP20.65■□□□□ 0.9
TNFRSF12A-207ENST00000575836 HMOX1P09601 288 aa20.65■□□□□ 0.9
TNFRSF12A-207ENST00000575836 ACSBG1Q96GR2 724 aa20.65■□□□□ 0.9
TNFRSF12A-207ENST00000575836 CYP27B1O15528 508 aa20.64■□□□□ 0.89
TNFRSF12A-207ENST00000575836 IFNL2Q8IZJ0 200 aa20.64■□□□□ 0.89
TNFRSF12A-207ENST00000575836 PRKRIP1Q9H875 184 aaPredicted RBP20.64■□□□□ 0.89
TNFRSF12A-207ENST00000575836 EN1Q05925 392 aaPredicted RBP20.63■□□□□ 0.89
TNFRSF12A-207ENST00000575836 KCNQ2O43526 872 aa20.62■□□□□ 0.89
TNFRSF12A-207ENST00000575836 KAT6BQ8WYB5 2073 aa20.62■□□□□ 0.89
TNFRSF12A-207ENST00000575836 NHSQ6T4R5 1651 aa20.61■□□□□ 0.89
TNFRSF12A-207ENST00000575836 U2AF1L5P0DN76 240 aaPredicted RBP20.61■□□□□ 0.89
TNFRSF12A-207ENST00000575836 PHKG2P15735 406 aa20.61■□□□□ 0.89
TNFRSF12A-207ENST00000575836 U2AF1Q01081 240 aaKnown RBP eCLIP20.61■□□□□ 0.89
TNFRSF12A-207ENST00000575836 SYTL4Q96C24 671 aaPredicted RBP20.61■□□□□ 0.89
TNFRSF12A-207ENST00000575836 NKX1-1Q15270 411 aaPredicted RBP20.6■□□□□ 0.89
TNFRSF12A-207ENST00000575836 ZNF530Q6P9A1 599 aaPredicted RBP20.6■□□□□ 0.89
TNFRSF12A-207ENST00000575836 PTF1AQ7RTS3 328 aa20.6■□□□□ 0.89
TNFRSF12A-207ENST00000575836 PLSCR1O15162 318 aa20.59■□□□□ 0.89
TNFRSF12A-207ENST00000575836 HSP90AB1P08238 724 aaKnown RBP20.59■□□□□ 0.89
TNFRSF12A-207ENST00000575836 PRIM1P49642 420 aaKnown RBP20.59■□□□□ 0.89
TNFRSF12A-207ENST00000575836 C1orf141Q5JVX7 400 aa20.59■□□□□ 0.89
TNFRSF12A-207ENST00000575836 CAMKK2Q96RR4 588 aa20.58■□□□□ 0.89
TNFRSF12A-207ENST00000575836 EZH2Q15910 746 aaKnown RBP20.57■□□□□ 0.88
TNFRSF12A-207ENST00000575836 DOT1LQ8TEK3 1739 aa20.57■□□□□ 0.88
TNFRSF12A-207ENST00000575836 FCHSD2O94868 740 aa20.56■□□□□ 0.88
TNFRSF12A-207ENST00000575836 ANP32CO43423 234 aa20.55■□□□□ 0.88
TNFRSF12A-207ENST00000575836 PRKAR2BP31323 418 aa20.55■□□□□ 0.88
TNFRSF12A-207ENST00000575836 DCAF5Q96JK2 942 aa20.55■□□□□ 0.88
TNFRSF12A-207ENST00000575836 RSPH6AQ9H0K4 717 aa20.55■□□□□ 0.88
TNFRSF12A-207ENST00000575836 AKAP4Q5JQC9 854 aa20.54■□□□□ 0.88
TNFRSF12A-207ENST00000575836 MTHFSDQ2M296 383 aaKnown RBP20.53■□□□□ 0.88
TNFRSF12A-207ENST00000575836 MPRIPQ6WCQ1 1025 aa20.53■□□□□ 0.88
TNFRSF12A-207ENST00000575836 GAS2L2Q8NHY3 880 aa20.53■□□□□ 0.88
TNFRSF12A-207ENST00000575836 RGPD3A6NKT7 1758 aaPredicted RBP20.53■□□□□ 0.88
TNFRSF12A-207ENST00000575836 RGPD4Q7Z3J3 1758 aa20.53■□□□□ 0.88
TNFRSF12A-207ENST00000575836 BTAF1O14981 1849 aa20.53■□□□□ 0.88
TNFRSF12A-207ENST00000575836 NEFMP07197 916 aa20.52■□□□□ 0.88
TNFRSF12A-207ENST00000575836 PNNQ9H307 717 aaKnown RBP20.52■□□□□ 0.88
TNFRSF12A-207ENST00000575836 ERVV-2B6SEH9 535 aa20.51■□□□□ 0.87
TNFRSF12A-207ENST00000575836 TMOD3Q9NYL9 352 aa20.51■□□□□ 0.87
TNFRSF12A-207ENST00000575836 TXNRD1Q16881 649 aa20.5■□□□□ 0.87
TNFRSF12A-207ENST00000575836 TOGARAM1Q9Y4F4 1720 aa20.5■□□□□ 0.87
TNFRSF12A-207ENST00000575836 KDM6AO15550 1401 aaPredicted RBP20.48■□□□□ 0.87
TNFRSF12A-207ENST00000575836 CABP4P57796 275 aa20.48■□□□□ 0.87
TNFRSF12A-207ENST00000575836 WDR43Q15061 677 aaKnown RBP eCLIP20.48■□□□□ 0.87
TNFRSF12A-207ENST00000575836 PIGBQ92521 554 aa20.48■□□□□ 0.87
TNFRSF12A-207ENST00000575836 PHACTR3Q96KR7 559 aa20.48■□□□□ 0.87
TNFRSF12A-207ENST00000575836 RREB1Q92766 1687 aa20.48■□□□□ 0.87
TNFRSF12A-207ENST00000575836 NBPF14Q5TI25 921 aa20.47■□□□□ 0.87
TNFRSF12A-207ENST00000575836 SMARCC1Q92922 1105 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF12A-207ENST00000575836 ITGB4P16144 1822 aa20.46■□□□□ 0.87
TNFRSF12A-207ENST00000575836 GNAT3A8MTJ3 354 aa20.46■□□□□ 0.87
TNFRSF12A-207ENST00000575836 PROM2Q8N271 834 aa20.46■□□□□ 0.87
TNFRSF12A-207ENST00000575836 MAP3K5Q99683 1374 aa20.46■□□□□ 0.87
TNFRSF12A-207ENST00000575836 SLC27A3Q5K4L6 730 aa20.45■□□□□ 0.86
TNFRSF12A-207ENST00000575836 MAPK8IP3Q9UPT6 1336 aa20.45■□□□□ 0.86
TNFRSF12A-207ENST00000575836 RNMTO43148 476 aaKnown RBP20.44■□□□□ 0.86
TNFRSF12A-207ENST00000575836 PALLDQ8WX93 1383 aa20.44■□□□□ 0.86
TNFRSF12A-207ENST00000575836 NUP188Q5SRE5 1749 aa20.44■□□□□ 0.86
TNFRSF12A-207ENST00000575836 HMGB2P26583 209 aaKnown RBP20.43■□□□□ 0.86
TNFRSF12A-207ENST00000575836 SCN11AQ9UI33 1791 aa20.42■□□□□ 0.86
TNFRSF12A-207ENST00000575836 NFATC2IPQ8NCF5 419 aa20.42■□□□□ 0.86
TNFRSF12A-207ENST00000575836 PLEKHF1Q96S99 279 aa20.42■□□□□ 0.86
TNFRSF12A-207ENST00000575836 LGR6Q9HBX8 967 aa20.42■□□□□ 0.86
TNFRSF12A-207ENST00000575836 CCNL1Q9UK58 526 aaPredicted RBP20.42■□□□□ 0.86
TNFRSF12A-207ENST00000575836 RTF1Q92541 710 aaKnown RBP20.41■□□□□ 0.86
TNFRSF12A-207ENST00000575836 SLC52A2Q9HAB3 445 aa20.41■□□□□ 0.86
TNFRSF12A-207ENST00000575836 LY75O60449 1722 aa20.4■□□□□ 0.86
TNFRSF12A-207ENST00000575836 ATG3Q9NT62 314 aa20.4■□□□□ 0.86
TNFRSF12A-207ENST00000575836 ASAP1Q9ULH1 1129 aa20.4■□□□□ 0.86
TNFRSF12A-207ENST00000575836 HTATSF1O43719 755 aaKnown RBP20.39■□□□□ 0.85
TNFRSF12A-207ENST00000575836 LRRC4BQ9NT99 713 aa20.39■□□□□ 0.85
TNFRSF12A-207ENST00000575836 STK32BQ9NY57 414 aa20.39■□□□□ 0.85
TNFRSF12A-207ENST00000575836 ADAMTS8Q9UP79 889 aa20.39■□□□□ 0.85
TNFRSF12A-207ENST00000575836 ADAMTS7Q9UKP4 1686 aa20.38■□□□□ 0.85
TNFRSF12A-207ENST00000575836 MRC1P22897 1456 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms