RNA–Protein interactions for RNA: ENST00000573001.5

TNFRSF12A-204, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 3 BASIC

Gene TNFRSF12A, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-204ENST00000573001 NME9Q86XW9 330 aa17.93■□□□□ 0.46
TNFRSF12A-204ENST00000573001 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.93■□□□□ 0.46
TNFRSF12A-204ENST00000573001 ZNF526Q8TF50 670 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF12A-204ENST00000573001 SYTL4Q96C24 671 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF12A-204ENST00000573001 MSH5O43196 834 aa17.92■□□□□ 0.46
TNFRSF12A-204ENST00000573001 CD163L1Q9NR16 1453 aa17.92■□□□□ 0.46
TNFRSF12A-204ENST00000573001 DOT1LQ8TEK3 1739 aa17.92■□□□□ 0.46
TNFRSF12A-204ENST00000573001 DNAJC5GQ8N7S2 189 aa17.9■□□□□ 0.46
TNFRSF12A-204ENST00000573001 IP6K1Q92551 441 aa17.9■□□□□ 0.46
TNFRSF12A-204ENST00000573001 FAM208AQ9UK61 1670 aaKnown RBP17.88■□□□□ 0.45
TNFRSF12A-204ENST00000573001 APLP1P51693 650 aa17.88■□□□□ 0.45
TNFRSF12A-204ENST00000573001 USP47Q96K76 1375 aa17.87■□□□□ 0.45
TNFRSF12A-204ENST00000573001 FLAD1Q8NFF5 587 aa17.86■□□□□ 0.45
TNFRSF12A-204ENST00000573001 IGSF1Q8N6C5 1336 aa17.85■□□□□ 0.45
TNFRSF12A-204ENST00000573001 ZCRB1Q8TBF4 217 aaKnown RBP17.85■□□□□ 0.45
TNFRSF12A-204ENST00000573001 C5P01031 1676 aa17.84■□□□□ 0.45
TNFRSF12A-204ENST00000573001 MEGF6O75095 1541 aa17.84■□□□□ 0.45
TNFRSF12A-204ENST00000573001 EDC4Q6P2E9 1401 aaKnown RBP17.84■□□□□ 0.45
TNFRSF12A-204ENST00000573001 L3MBTL2Q969R5 705 aa17.84■□□□□ 0.45
TNFRSF12A-204ENST00000573001 LTV1Q96GA3 475 aaPredicted RBP17.83■□□□□ 0.44
TNFRSF12A-204ENST00000573001 CICQ96RK0 1608 aaPredicted RBP17.83■□□□□ 0.44
TNFRSF12A-204ENST00000573001 ROCK2O75116 1388 aaKnown RBP17.81■□□□□ 0.44
TNFRSF12A-204ENST00000573001 TOMM70O94826 608 aa17.81■□□□□ 0.44
TNFRSF12A-204ENST00000573001 HMGB2P26583 209 aaKnown RBP17.81■□□□□ 0.44
TNFRSF12A-204ENST00000573001 AMIGO3Q86WK7 504 aa17.81■□□□□ 0.44
TNFRSF12A-204ENST00000573001 TAF1LQ8IZX4 1826 aa17.81■□□□□ 0.44
TNFRSF12A-204ENST00000573001 SLC12A5Q9H2X9 1139 aa17.8■□□□□ 0.44
TNFRSF12A-204ENST00000573001 TOGARAM1Q9Y4F4 1720 aa17.79■□□□□ 0.44
TNFRSF12A-204ENST00000573001 HOXC9P31274 260 aa17.79■□□□□ 0.44
TNFRSF12A-204ENST00000573001 HDGFL2Q7Z4V5 671 aaPredicted RBP17.79■□□□□ 0.44
TNFRSF12A-204ENST00000573001 WWC3Q9ULE0 1092 aa17.79■□□□□ 0.44
TNFRSF12A-204ENST00000573001 MAP3K19Q56UN5 1328 aa17.78■□□□□ 0.44
TNFRSF12A-204ENST00000573001 RGPD2P0DJD1 1756 aa17.78■□□□□ 0.44
TNFRSF12A-204ENST00000573001 A0A1W2PP64 1363 aa17.78■□□□□ 0.44
TNFRSF12A-204ENST00000573001 PALLDQ8WX93 1383 aa17.78■□□□□ 0.44
TNFRSF12A-204ENST00000573001 CGNL1Q0VF96 1302 aa17.77■□□□□ 0.44
TNFRSF12A-204ENST00000573001 COL13A1Q5TAT6 717 aaPredicted RBP17.77■□□□□ 0.44
TNFRSF12A-204ENST00000573001 TMC1Q8TDI8 760 aa17.77■□□□□ 0.44
TNFRSF12A-204ENST00000573001 C4BP0C0L5 1744 aa17.77■□□□□ 0.44
TNFRSF12A-204ENST00000573001 PCNTO95613 3336 aa17.77■□□□□ 0.43
TNFRSF12A-204ENST00000573001 UBR3Q6ZT12 1888 aa17.75■□□□□ 0.43
TNFRSF12A-204ENST00000573001 NBPF6Q5VWK0 638 aa17.75■□□□□ 0.43
TNFRSF12A-204ENST00000573001 JMYQ8N9B5 988 aa17.75■□□□□ 0.43
TNFRSF12A-204ENST00000573001 NBPF4Q96M43 638 aa17.75■□□□□ 0.43
TNFRSF12A-204ENST00000573001 TERF2IPQ9NYB0 399 aa17.75■□□□□ 0.43
TNFRSF12A-204ENST00000573001 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.74■□□□□ 0.43
TNFRSF12A-204ENST00000573001 SMIM5Q71RC9 77 aa17.74■□□□□ 0.43
TNFRSF12A-204ENST00000573001 WDR90Q96KV7 1748 aa17.73■□□□□ 0.43
TNFRSF12A-204ENST00000573001 FBLN1P23142 703 aa17.73■□□□□ 0.43
TNFRSF12A-204ENST00000573001 AMPHP49418 695 aa17.73■□□□□ 0.43
TNFRSF12A-204ENST00000573001 AK7Q96M32 723 aa17.73■□□□□ 0.43
TNFRSF12A-204ENST00000573001 NSD3Q9BZ95 1437 aa17.72■□□□□ 0.43
TNFRSF12A-204ENST00000573001 SSFA2P28290 1259 aa17.72■□□□□ 0.43
TNFRSF12A-204ENST00000573001 KLRG1Q96E93 195 aa17.72■□□□□ 0.43
TNFRSF12A-204ENST00000573001 NMRK2Q9NPI5 230 aa17.72■□□□□ 0.43
TNFRSF12A-204ENST00000573001 PXDNLA1KZ92 1463 aa17.71■□□□□ 0.43
TNFRSF12A-204ENST00000573001 RTL1A6NKG5 1358 aa17.71■□□□□ 0.43
TNFRSF12A-204ENST00000573001 PHF14O94880 888 aa17.71■□□□□ 0.43
TNFRSF12A-204ENST00000573001 MPRIPQ6WCQ1 1025 aa17.71■□□□□ 0.43
TNFRSF12A-204ENST00000573001 RBM46Q8TBY0 533 aaKnown RBP17.71■□□□□ 0.43
TNFRSF12A-204ENST00000573001 SMARCC1Q92922 1105 aaPredicted RBP17.71■□□□□ 0.43
TNFRSF12A-204ENST00000573001 PUS7Q96PZ0 661 aaKnown RBP17.71■□□□□ 0.43
TNFRSF12A-204ENST00000573001 PCDH11XQ9BZA7 1347 aa17.71■□□□□ 0.42
TNFRSF12A-204ENST00000573001 PCDH11YQ9BZA8 1340 aa17.71■□□□□ 0.42
TNFRSF12A-204ENST00000573001 KIAA1551Q9HCM1 1747 aa17.7■□□□□ 0.42
TNFRSF12A-204ENST00000573001 USHBP1Q8N6Y0 703 aa17.7■□□□□ 0.42
TNFRSF12A-204ENST00000573001 RAPGEF4Q8WZA2 1011 aa17.7■□□□□ 0.42
TNFRSF12A-204ENST00000573001 COG3Q96JB2 828 aa17.7■□□□□ 0.42
TNFRSF12A-204ENST00000573001 KIF13BQ9NQT8 1826 aa17.7■□□□□ 0.42
TNFRSF12A-204ENST00000573001 CYP27B1O15528 508 aa17.69■□□□□ 0.42
TNFRSF12A-204ENST00000573001 HTRA3P83110 453 aa17.69■□□□□ 0.42
TNFRSF12A-204ENST00000573001 MAP2P11137 1827 aaKnown RBP17.68■□□□□ 0.42
TNFRSF12A-204ENST00000573001 TATP17735 454 aaPredicted RBP17.68■□□□□ 0.42
TNFRSF12A-204ENST00000573001 PRELPP51888 382 aa17.68■□□□□ 0.42
TNFRSF12A-204ENST00000573001 CAPN15O75808 1086 aa17.67■□□□□ 0.42
TNFRSF12A-204ENST00000573001 TGFB2P61812 414 aa17.67■□□□□ 0.42
TNFRSF12A-204ENST00000573001 LINC00116Q8NCU8 138 aa17.67■□□□□ 0.42
TNFRSF12A-204ENST00000573001 ITGB4P16144 1822 aa17.67■□□□□ 0.42
TNFRSF12A-204ENST00000573001 MMP10P09238 476 aa17.66■□□□□ 0.42
TNFRSF12A-204ENST00000573001 PIGBQ92521 554 aa17.66■□□□□ 0.42
TNFRSF12A-204ENST00000573001 SIN3AQ96ST3 1273 aa17.66■□□□□ 0.42
TNFRSF12A-204ENST00000573001 LOC102724428A0A0B4J2F2 783 aa17.65■□□□□ 0.42
TNFRSF12A-204ENST00000573001 SIK1P57059 783 aa17.65■□□□□ 0.42
TNFRSF12A-204ENST00000573001 FSTL1Q12841 308 aa17.65■□□□□ 0.42
TNFRSF12A-204ENST00000573001 RRS1Q15050 365 aaKnown RBP17.65■□□□□ 0.42
TNFRSF12A-204ENST00000573001 TNS4Q8IZW8 715 aa17.65■□□□□ 0.42
TNFRSF12A-204ENST00000573001 BCS1LQ9Y276 419 aa17.65■□□□□ 0.42
TNFRSF12A-204ENST00000573001 C10orf71Q711Q0 1435 aa17.64■□□□□ 0.42
TNFRSF12A-204ENST00000573001 N4BP2Q86UW6 1770 aaPredicted RBP17.64■□□□□ 0.41
TNFRSF12A-204ENST00000573001 A0A0G2JLW4 131 aa17.64■□□□□ 0.41
TNFRSF12A-204ENST00000573001 ARHGAP27Q6ZUM4 889 aa17.64■□□□□ 0.41
TNFRSF12A-204ENST00000573001 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.41
TNFRSF12A-204ENST00000573001 NKX1-1Q15270 411 aaPredicted RBP17.63■□□□□ 0.41
TNFRSF12A-204ENST00000573001 GNPATO15228 680 aa17.62■□□□□ 0.41
TNFRSF12A-204ENST00000573001 ITPK1Q13572 414 aa17.62■□□□□ 0.41
TNFRSF12A-204ENST00000573001 CARD11Q9BXL7 1154 aa17.62■□□□□ 0.41
TNFRSF12A-204ENST00000573001 INSRP06213 1382 aa17.62■□□□□ 0.41
TNFRSF12A-204ENST00000573001 PLEKHG2Q9H7P9 1386 aa17.61■□□□□ 0.41
TNFRSF12A-204ENST00000573001 PKD1L3Q7Z443 1732 aa17.61■□□□□ 0.41
TNFRSF12A-204ENST00000573001 BRCA1P38398 1863 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms