RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 NPC1L1Q9UHC9 1359 aa28.08■■■□□ 2.09
CHMP6-204ENST00000572778 CAMKK2Q96RR4 588 aa28.07■■■□□ 2.08
CHMP6-204ENST00000572778 KCNQ2O43526 872 aa28.05■■■□□ 2.08
CHMP6-204ENST00000572778 MTHFSP49914 203 aa28.04■■■□□ 2.08
CHMP6-204ENST00000572778 NCAPD2Q15021 1401 aa28.01■■■□□ 2.08
CHMP6-204ENST00000572778 PARD3Q8TEW0 1356 aa28■■■□□ 2.07
CHMP6-204ENST00000572778 IGSF1Q8N6C5 1336 aa27.99■■■□□ 2.07
CHMP6-204ENST00000572778 PLSCR1O15162 318 aa27.99■■■□□ 2.07
CHMP6-204ENST00000572778 PCDH11XQ9BZA7 1347 aa27.98■■■□□ 2.07
CHMP6-204ENST00000572778 PCDH11YQ9BZA8 1340 aa27.98■■■□□ 2.07
CHMP6-204ENST00000572778 SBF2Q86WG5 1849 aa27.97■■■□□ 2.07
CHMP6-204ENST00000572778 SYTL4Q96C24 671 aaPredicted RBP27.97■■■□□ 2.07
CHMP6-204ENST00000572778 SPG7Q9UQ90 795 aa27.97■■■□□ 2.07
CHMP6-204ENST00000572778 IL13P35225 146 aa27.96■■■□□ 2.07
CHMP6-204ENST00000572778 CYP27B1O15528 508 aa27.94■■■□□ 2.06
CHMP6-204ENST00000572778 PRIM1P49642 420 aaKnown RBP27.94■■■□□ 2.06
CHMP6-204ENST00000572778 SULT6B1Q6IMI4 303 aa27.92■■■□□ 2.06
CHMP6-204ENST00000572778 AEBP1Q8IUX7 1158 aa27.92■■■□□ 2.06
CHMP6-204ENST00000572778 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.92■■■□□ 2.06
CHMP6-204ENST00000572778 NHSQ6T4R5 1651 aa27.91■■■□□ 2.06
CHMP6-204ENST00000572778 PSDA5PKW4 1024 aaPredicted RBP27.91■■■□□ 2.06
CHMP6-204ENST00000572778 DIAPH1O60610 1272 aaKnown RBP27.91■■■□□ 2.06
CHMP6-204ENST00000572778 SHANK3Q9BYB0 1731 aa27.91■■■□□ 2.06
CHMP6-204ENST00000572778 DDX10Q13206 875 aaKnown RBP27.9■■■□□ 2.06
CHMP6-204ENST00000572778 NBPF14Q5TI25 921 aa27.9■■■□□ 2.06
CHMP6-204ENST00000572778 R3HDM1Q15032 1099 aaKnown RBP27.89■■■□□ 2.06
CHMP6-204ENST00000572778 TXNRD1Q16881 649 aa27.89■■■□□ 2.06
CHMP6-204ENST00000572778 PROM2Q8N271 834 aa27.89■■■□□ 2.06
CHMP6-204ENST00000572778 PLEKHO1Q53GL0 409 aaPredicted RBP27.87■■■□□ 2.05
CHMP6-204ENST00000572778 PPP2R1AP30153 589 aa27.86■■■□□ 2.05
CHMP6-204ENST00000572778 IFNL2Q8IZJ0 200 aa27.86■■■□□ 2.05
CHMP6-204ENST00000572778 PHKG2P15735 406 aa27.85■■■□□ 2.05
CHMP6-204ENST00000572778 CFAP53Q96M91 514 aa27.85■■■□□ 2.05
CHMP6-204ENST00000572778 RREB1Q92766 1687 aa27.84■■■□□ 2.05
CHMP6-204ENST00000572778 PKD1L3Q7Z443 1732 aa27.84■■■□□ 2.05
CHMP6-204ENST00000572778 HMOX1P09601 288 aa27.84■■■□□ 2.05
CHMP6-204ENST00000572778 NKX1-1Q15270 411 aaPredicted RBP27.84■■■□□ 2.05
CHMP6-204ENST00000572778 PLEKHG2Q9H7P9 1386 aa27.84■■■□□ 2.05
CHMP6-204ENST00000572778 U2SURPO15042 1029 aaKnown RBP27.83■■■□□ 2.05
CHMP6-204ENST00000572778 AMOTQ4VCS5 1084 aa27.83■■■□□ 2.05
CHMP6-204ENST00000572778 KDRP35968 1356 aa27.83■■■□□ 2.05
CHMP6-204ENST00000572778 DOT1LQ8TEK3 1739 aa27.82■■■□□ 2.04
CHMP6-204ENST00000572778 MPRIPQ6WCQ1 1025 aa27.82■■■□□ 2.04
CHMP6-204ENST00000572778 RGPD3A6NKT7 1758 aaPredicted RBP27.81■■■□□ 2.04
CHMP6-204ENST00000572778 RGPD4Q7Z3J3 1758 aa27.81■■■□□ 2.04
CHMP6-204ENST00000572778 ZNF530Q6P9A1 599 aaPredicted RBP27.81■■■□□ 2.04
CHMP6-204ENST00000572778 NUP188Q5SRE5 1749 aa27.81■■■□□ 2.04
CHMP6-204ENST00000572778 BTAF1O14981 1849 aa27.8■■■□□ 2.04
CHMP6-204ENST00000572778 KAT6BQ8WYB5 2073 aa27.79■■■□□ 2.04
CHMP6-204ENST00000572778 COL3A1P02461 1466 aaPredicted RBP27.79■■■□□ 2.04
CHMP6-204ENST00000572778 ANO8Q9HCE9 1232 aaPredicted RBP27.78■■■□□ 2.04
CHMP6-204ENST00000572778 C1orf141Q5JVX7 400 aa27.77■■■□□ 2.04
CHMP6-204ENST00000572778 HSP90AB1P08238 724 aaKnown RBP27.76■■■□□ 2.03
CHMP6-204ENST00000572778 STK32BQ9NY57 414 aa27.75■■■□□ 2.03
CHMP6-204ENST00000572778 NUDCQ9Y266 331 aa27.75■■■□□ 2.03
CHMP6-204ENST00000572778 SLC27A3Q5K4L6 730 aa27.74■■■□□ 2.03
CHMP6-204ENST00000572778 PIGBQ92521 554 aa27.74■■■□□ 2.03
CHMP6-204ENST00000572778 LRRC4BQ9NT99 713 aa27.74■■■□□ 2.03
CHMP6-204ENST00000572778 TMOD3Q9NYL9 352 aa27.74■■■□□ 2.03
CHMP6-204ENST00000572778 DCAF5Q96JK2 942 aa27.73■■■□□ 2.03
CHMP6-204ENST00000572778 KCNQ4P56696 695 aa27.72■■■□□ 2.03
CHMP6-204ENST00000572778 TOGARAM1Q9Y4F4 1720 aa27.7■■■□□ 2.03
CHMP6-204ENST00000572778 RALBP1Q15311 655 aa27.7■■■□□ 2.02
CHMP6-204ENST00000572778 SLC15A2Q16348 729 aa27.7■■■□□ 2.02
CHMP6-204ENST00000572778 CCNL1Q9UK58 526 aaPredicted RBP27.7■■■□□ 2.02
CHMP6-204ENST00000572778 SMARCC1Q92922 1105 aaPredicted RBP27.69■■■□□ 2.02
CHMP6-204ENST00000572778 PALLDQ8WX93 1383 aa27.69■■■□□ 2.02
CHMP6-204ENST00000572778 ERVV-2B6SEH9 535 aa27.68■■■□□ 2.02
CHMP6-204ENST00000572778 U2AF1L5P0DN76 240 aaPredicted RBP27.68■■■□□ 2.02
CHMP6-204ENST00000572778 U2AF1Q01081 240 aaKnown RBP eCLIP27.68■■■□□ 2.02
CHMP6-204ENST00000572778 MTHFSDQ2M296 383 aaKnown RBP27.68■■■□□ 2.02
CHMP6-204ENST00000572778 AKAP4Q5JQC9 854 aa27.68■■■□□ 2.02
CHMP6-204ENST00000572778 CABP4P57796 275 aa27.67■■■□□ 2.02
CHMP6-204ENST00000572778 KDM6AO15550 1401 aaPredicted RBP27.66■■■□□ 2.02
CHMP6-204ENST00000572778 ZNF316A6NFI3 1004 aaPredicted RBP27.64■■■□□ 2.02
CHMP6-204ENST00000572778 PRKAR2BP31323 418 aa27.64■■■□□ 2.02
CHMP6-204ENST00000572778 ZNF827Q17R98 1081 aa27.64■■■□□ 2.02
CHMP6-204ENST00000572778 ASAP1Q9ULH1 1129 aa27.64■■■□□ 2.02
CHMP6-204ENST00000572778 RSPH6AQ9H0K4 717 aa27.63■■■□□ 2.01
CHMP6-204ENST00000572778 AKT1S1Q96B36 256 aa27.61■■■□□ 2.01
CHMP6-204ENST00000572778 PDGFDQ9GZP0 370 aaPredicted RBP27.61■■■□□ 2.01
CHMP6-204ENST00000572778 ATG3Q9NT62 314 aa27.61■■■□□ 2.01
CHMP6-204ENST00000572778 ITGB4P16144 1822 aa27.61■■■□□ 2.01
CHMP6-204ENST00000572778 NFATC2IPQ8NCF5 419 aa27.6■■■□□ 2.01
CHMP6-204ENST00000572778 GAS2L2Q8NHY3 880 aa27.6■■■□□ 2.01
CHMP6-204ENST00000572778 LGR6Q9HBX8 967 aa27.6■■■□□ 2.01
CHMP6-204ENST00000572778 PAPPAQ13219 1627 aa27.59■■■□□ 2.01
CHMP6-204ENST00000572778 LY75O60449 1722 aa27.59■■■□□ 2.01
CHMP6-204ENST00000572778 FCHSD2O94868 740 aa27.59■■■□□ 2.01
CHMP6-204ENST00000572778 RNMTO43148 476 aaKnown RBP27.58■■■□□ 2.01
CHMP6-204ENST00000572778 PHACTR3Q96KR7 559 aa27.58■■■□□ 2.01
CHMP6-204ENST00000572778 TFCP2L1Q9NZI6 479 aa27.58■■■□□ 2.01
CHMP6-204ENST00000572778 MYBBP1AQ9BQG0 1328 aaKnown RBP27.58■■■□□ 2.01
CHMP6-204ENST00000572778 LOC102724428A0A0B4J2F2 783 aa27.57■■■□□ 2
CHMP6-204ENST00000572778 SIK1P57059 783 aa27.57■■■□□ 2
CHMP6-204ENST00000572778 HMGB2P26583 209 aaKnown RBP27.56■■■□□ 2
CHMP6-204ENST00000572778 ZBTB7AO95365 584 aa27.55■■■□□ 2
CHMP6-204ENST00000572778 RBM42Q9BTD8 480 aaKnown RBP27.55■■■□□ 2
CHMP6-204ENST00000572778 SPON1Q9HCB6 807 aa27.55■■■□□ 2
CHMP6-204ENST00000572778 GNAT3A8MTJ3 354 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms