RNA–Protein interactions for RNA: ENST00000571945.5

ABR-215, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-215ENST00000571945 DEFB132Q7Z7B7 95 aa34.32■■■■□ 3.08
ABR-215ENST00000571945 ZCRB1Q8TBF4 217 aaKnown RBP34.3■■■■□ 3.08
ABR-215ENST00000571945 PARD3Q8TEW0 1356 aa34.29■■■■□ 3.08
ABR-215ENST00000571945 MTHFSP49914 203 aa34.29■■■■□ 3.08
ABR-215ENST00000571945 RREB1Q92766 1687 aa34.28■■■■□ 3.08
ABR-215ENST00000571945 DOT1LQ8TEK3 1739 aa34.28■■■■□ 3.08
ABR-215ENST00000571945 BCL11BQ9C0K0 894 aaPredicted RBP34.25■■■■□ 3.07
ABR-215ENST00000571945 COL3A1P02461 1466 aaPredicted RBP34.25■■■■□ 3.07
ABR-215ENST00000571945 PCDH11XQ9BZA7 1347 aa34.25■■■■□ 3.07
ABR-215ENST00000571945 PCDH11YQ9BZA8 1340 aa34.25■■■■□ 3.07
ABR-215ENST00000571945 APBA3O96018 575 aa34.24■■■■□ 3.07
ABR-215ENST00000571945 KAT6BQ8WYB5 2073 aa34.23■■■■□ 3.07
ABR-215ENST00000571945 CNGB1Q14028 1251 aaPredicted RBP34.23■■■■□ 3.07
ABR-215ENST00000571945 DDX54Q8TDD1 881 aaKnown RBP34.23■■■■□ 3.07
ABR-215ENST00000571945 IL13P35225 146 aa34.22■■■■□ 3.07
ABR-215ENST00000571945 BTAF1O14981 1849 aa34.22■■■■□ 3.07
ABR-215ENST00000571945 EN1Q05925 392 aaPredicted RBP34.21■■■■□ 3.07
ABR-215ENST00000571945 KDRP35968 1356 aa34.21■■■■□ 3.07
ABR-215ENST00000571945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.2■■■■□ 3.07
ABR-215ENST00000571945 NUP188Q5SRE5 1749 aa34.19■■■■□ 3.06
ABR-215ENST00000571945 CAMKK2Q96RR4 588 aa34.18■■■■□ 3.06
ABR-215ENST00000571945 SPG7Q9UQ90 795 aa34.17■■■■□ 3.06
ABR-215ENST00000571945 TOGARAM1Q9Y4F4 1720 aa34.14■■■■□ 3.06
ABR-215ENST00000571945 PLSCR1O15162 318 aa34.14■■■■□ 3.06
ABR-215ENST00000571945 DIAPH1O60610 1272 aaKnown RBP34.14■■■■□ 3.06
ABR-215ENST00000571945 DDX10Q13206 875 aaKnown RBP34.14■■■■□ 3.06
ABR-215ENST00000571945 ACSBG1Q96GR2 724 aa34.14■■■■□ 3.06
ABR-215ENST00000571945 PPP2R1AP30153 589 aa34.13■■■■□ 3.05
ABR-215ENST00000571945 EZH2Q15910 746 aaKnown RBP34.13■■■■□ 3.05
ABR-215ENST00000571945 PTF1AQ7RTS3 328 aa34.13■■■■□ 3.05
ABR-215ENST00000571945 CYP27B1O15528 508 aa34.11■■■■□ 3.05
ABR-215ENST00000571945 KCNQ2O43526 872 aa34.11■■■■□ 3.05
ABR-215ENST00000571945 CFAP53Q96M91 514 aa34.11■■■■□ 3.05
ABR-215ENST00000571945 SULT6B1Q6IMI4 303 aa34.1■■■■□ 3.05
ABR-215ENST00000571945 AEBP1Q8IUX7 1158 aa34.1■■■■□ 3.05
ABR-215ENST00000571945 ITGB4P16144 1822 aa34.09■■■■□ 3.05
ABR-215ENST00000571945 NKX1-1Q15270 411 aaPredicted RBP34.06■■■■□ 3.04
ABR-215ENST00000571945 AMOTQ4VCS5 1084 aa34.06■■■■□ 3.04
ABR-215ENST00000571945 PLEKHO1Q53GL0 409 aaPredicted RBP34.04■■■■□ 3.04
ABR-215ENST00000571945 IFNL2Q8IZJ0 200 aa34.04■■■■□ 3.04
ABR-215ENST00000571945 PHKG2P15735 406 aa34.03■■■■□ 3.04
ABR-215ENST00000571945 LY75O60449 1722 aa34.02■■■■□ 3.04
ABR-215ENST00000571945 PRIM1P49642 420 aaKnown RBP34.02■■■■□ 3.04
ABR-215ENST00000571945 RALBP1Q15311 655 aa34.02■■■■□ 3.04
ABR-215ENST00000571945 SYTL4Q96C24 671 aaPredicted RBP34■■■■□ 3.03
ABR-215ENST00000571945 ZNF316A6NFI3 1004 aaPredicted RBP33.97■■■■□ 3.03
ABR-215ENST00000571945 HMOX1P09601 288 aa33.97■■■■□ 3.03
ABR-215ENST00000571945 ZNF530Q6P9A1 599 aaPredicted RBP33.97■■■■□ 3.03
ABR-215ENST00000571945 U2SURPO15042 1029 aaKnown RBP33.96■■■■□ 3.03
ABR-215ENST00000571945 HSP90AB1P08238 724 aaKnown RBP33.96■■■■□ 3.03
ABR-215ENST00000571945 NUDCQ9Y266 331 aa33.96■■■■□ 3.03
ABR-215ENST00000571945 PAPPAQ13219 1627 aa33.96■■■■□ 3.03
ABR-215ENST00000571945 TXNRD1Q16881 649 aa33.95■■■■□ 3.03
ABR-215ENST00000571945 SCN11AQ9UI33 1791 aa33.94■■■■□ 3.02
ABR-215ENST00000571945 VIRMAQ69YN4 1812 aaKnown RBP33.94■■■■□ 3.02
ABR-215ENST00000571945 PROM2Q8N271 834 aa33.93■■■■□ 3.02
ABR-215ENST00000571945 C1orf141Q5JVX7 400 aa33.92■■■■□ 3.02
ABR-215ENST00000571945 NBPF14Q5TI25 921 aa33.92■■■■□ 3.02
ABR-215ENST00000571945 KDM6AO15550 1401 aaPredicted RBP33.91■■■■□ 3.02
ABR-215ENST00000571945 DCAF5Q96JK2 942 aa33.91■■■■□ 3.02
ABR-215ENST00000571945 MYBBP1AQ9BQG0 1328 aaKnown RBP33.89■■■■□ 3.02
ABR-215ENST00000571945 ADAMTS7Q9UKP4 1686 aa33.89■■■■□ 3.02
ABR-215ENST00000571945 SLC27A3Q5K4L6 730 aa33.87■■■■□ 3.01
ABR-215ENST00000571945 MPRIPQ6WCQ1 1025 aa33.87■■■■□ 3.01
ABR-215ENST00000571945 AKAP4Q5JQC9 854 aa33.86■■■■□ 3.01
ABR-215ENST00000571945 ERVV-2B6SEH9 535 aa33.85■■■■□ 3.01
ABR-215ENST00000571945 TMOD3Q9NYL9 352 aa33.85■■■■□ 3.01
ABR-215ENST00000571945 R3HDM1Q15032 1099 aaKnown RBP33.84■■■■□ 3.01
ABR-215ENST00000571945 RSPH6AQ9H0K4 717 aa33.84■■■■□ 3.01
ABR-215ENST00000571945 PALLDQ8WX93 1383 aa33.84■■■■□ 3.01
ABR-215ENST00000571945 U2AF1L5P0DN76 240 aaPredicted RBP33.83■■■■□ 3.01
ABR-215ENST00000571945 U2AF1Q01081 240 aaKnown RBP eCLIP33.83■■■■□ 3.01
ABR-215ENST00000571945 PIGBQ92521 554 aa33.83■■■■□ 3.01
ABR-215ENST00000571945 MRC1P22897 1456 aa33.82■■■■□ 3.01
ABR-215ENST00000571945 PSDA5PKW4 1024 aaPredicted RBP33.82■■■■□ 3
ABR-215ENST00000571945 SMARCC1Q92922 1105 aaPredicted RBP33.82■■■■□ 3
ABR-215ENST00000571945 ANO8Q9HCE9 1232 aaPredicted RBP33.82■■■■□ 3
ABR-215ENST00000571945 C5P01031 1676 aa33.82■■■■□ 3
ABR-215ENST00000571945 TAF1LQ8IZX4 1826 aa33.81■■■■□ 3
ABR-215ENST00000571945 MTHFSDQ2M296 383 aaKnown RBP33.81■■■■□ 3
ABR-215ENST00000571945 PRKRIP1Q9H875 184 aaPredicted RBP33.81■■■■□ 3
ABR-215ENST00000571945 QSER1Q2KHR3 1735 aa33.81■■■■□ 3
ABR-215ENST00000571945 FCHSD2O94868 740 aa33.8■■■■□ 3
ABR-215ENST00000571945 PRKAR2BP31323 418 aa33.8■■■■□ 3
ABR-215ENST00000571945 GAS2L2Q8NHY3 880 aa33.8■■■■□ 3
ABR-215ENST00000571945 LRP5O75197 1615 aa33.79■■■■□ 3
ABR-215ENST00000571945 LRRC4BQ9NT99 713 aa33.79■■■■□ 3
ABR-215ENST00000571945 CASZ1Q86V15 1759 aa33.78■■■■□ 3
ABR-215ENST00000571945 ZNF831Q5JPB2 1677 aa33.77■■■■□ 3
ABR-215ENST00000571945 STK32BQ9NY57 414 aa33.77■■■■□ 3
ABR-215ENST00000571945 MAP3K5Q99683 1374 aa33.76■■■■□ 3
ABR-215ENST00000571945 CCNL1Q9UK58 526 aaPredicted RBP33.76■■■□□ 2.99
ABR-215ENST00000571945 HMGB2P26583 209 aaKnown RBP33.75■■■□□ 2.99
ABR-215ENST00000571945 CABP4P57796 275 aa33.74■■■□□ 2.99
ABR-215ENST00000571945 TUBGCP6Q96RT7 1819 aa33.74■■■□□ 2.99
ABR-215ENST00000571945 SLC15A2Q16348 729 aa33.73■■■□□ 2.99
ABR-215ENST00000571945 SIPA1L3O60292 1781 aaPredicted RBP33.7■■■□□ 2.99
ABR-215ENST00000571945 RNMTO43148 476 aaKnown RBP33.7■■■□□ 2.99
ABR-215ENST00000571945 PHACTR3Q96KR7 559 aa33.7■■■□□ 2.99
ABR-215ENST00000571945 CICQ96RK0 1608 aaPredicted RBP33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms