RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 GPBP1L1Q9HC44 474 aaPredicted RBP16.15■□□□□ 0.18
CHMP6-202ENST00000571457 ATP10DQ9P241 1426 aa16.15■□□□□ 0.18
CHMP6-202ENST00000571457 FAM208AQ9UK61 1670 aaKnown RBP16.14■□□□□ 0.18
CHMP6-202ENST00000571457 EDC4Q6P2E9 1401 aaKnown RBP16.14■□□□□ 0.17
CHMP6-202ENST00000571457 TERF2IPQ9NYB0 399 aa16.14■□□□□ 0.17
CHMP6-202ENST00000571457 LTV1Q96GA3 475 aaPredicted RBP16.13■□□□□ 0.17
CHMP6-202ENST00000571457 CD2APQ9Y5K6 639 aa16.13■□□□□ 0.17
CHMP6-202ENST00000571457 LY75O60449 1722 aa16.13■□□□□ 0.17
CHMP6-202ENST00000571457 USP47Q96K76 1375 aa16.13■□□□□ 0.17
CHMP6-202ENST00000571457 CD163L1Q9NR16 1453 aa16.12■□□□□ 0.17
CHMP6-202ENST00000571457 HSPA6P17066 643 aa16.12■□□□□ 0.17
CHMP6-202ENST00000571457 COL23A1Q86Y22 540 aaPredicted RBP16.12■□□□□ 0.17
CHMP6-202ENST00000571457 FLAD1Q8NFF5 587 aa16.12■□□□□ 0.17
CHMP6-202ENST00000571457 ZCRB1Q8TBF4 217 aaKnown RBP16.12■□□□□ 0.17
CHMP6-202ENST00000571457 NSD2O96028 1365 aa16.11■□□□□ 0.17
CHMP6-202ENST00000571457 DOT1LQ8TEK3 1739 aa16.11■□□□□ 0.17
CHMP6-202ENST00000571457 SLC12A5Q9H2X9 1139 aa16.1■□□□□ 0.17
CHMP6-202ENST00000571457 MSL1Q68DK7 614 aa16.09■□□□□ 0.17
CHMP6-202ENST00000571457 CGNL1Q0VF96 1302 aa16.08■□□□□ 0.16
CHMP6-202ENST00000571457 AMPHP49418 695 aa16.07■□□□□ 0.16
CHMP6-202ENST00000571457 COG3Q96JB2 828 aa16.07■□□□□ 0.16
CHMP6-202ENST00000571457 PUS7Q96PZ0 661 aaKnown RBP16.07■□□□□ 0.16
CHMP6-202ENST00000571457 A0A1W2PP64 1363 aa16.07■□□□□ 0.16
CHMP6-202ENST00000571457 ADCY9O60503 1353 aa16.07■□□□□ 0.16
CHMP6-202ENST00000571457 MAP3K19Q56UN5 1328 aa16.06■□□□□ 0.16
CHMP6-202ENST00000571457 HOXC9P31274 260 aa16.06■□□□□ 0.16
CHMP6-202ENST00000571457 ZNF526Q8TF50 670 aaPredicted RBP16.06■□□□□ 0.16
CHMP6-202ENST00000571457 CARD11Q9BXL7 1154 aa16.05■□□□□ 0.16
CHMP6-202ENST00000571457 MEGF6O75095 1541 aa16.04■□□□□ 0.16
CHMP6-202ENST00000571457 NEUROD1Q13562 356 aa16.04■□□□□ 0.16
CHMP6-202ENST00000571457 RAPGEF4Q8WZA2 1011 aa16.04■□□□□ 0.16
CHMP6-202ENST00000571457 SIN3AQ96ST3 1273 aa16.04■□□□□ 0.16
CHMP6-202ENST00000571457 C5P01031 1676 aa16.03■□□□□ 0.16
CHMP6-202ENST00000571457 RTL1A6NKG5 1358 aa16.02■□□□□ 0.16
CHMP6-202ENST00000571457 PALLDQ8WX93 1383 aa16.01■□□□□ 0.15
CHMP6-202ENST00000571457 TATP17735 454 aaPredicted RBP16.01■□□□□ 0.15
CHMP6-202ENST00000571457 SMARCC1Q92922 1105 aaPredicted RBP16.01■□□□□ 0.15
CHMP6-202ENST00000571457 AK7Q96M32 723 aa16.01■□□□□ 0.15
CHMP6-202ENST00000571457 SMG6Q86US8 1419 aaKnown RBP16.01■□□□□ 0.15
CHMP6-202ENST00000571457 NSD3Q9BZ95 1437 aa16.01■□□□□ 0.15
CHMP6-202ENST00000571457 IGSF1Q8N6C5 1336 aa16■□□□□ 0.15
CHMP6-202ENST00000571457 PCDH11XQ9BZA7 1347 aa16■□□□□ 0.15
CHMP6-202ENST00000571457 PCDH11YQ9BZA8 1340 aa16■□□□□ 0.15
CHMP6-202ENST00000571457 NBPF6Q5VWK0 638 aa16■□□□□ 0.15
CHMP6-202ENST00000571457 NBPF4Q96M43 638 aa16■□□□□ 0.15
CHMP6-202ENST00000571457 APLP1P51693 650 aa15.99■□□□□ 0.15
CHMP6-202ENST00000571457 MPRIPQ6WCQ1 1025 aa15.99■□□□□ 0.15
CHMP6-202ENST00000571457 RGPD2P0DJD1 1756 aa15.99■□□□□ 0.15
CHMP6-202ENST00000571457 SLC24A1O60721 1099 aa15.98■□□□□ 0.15
CHMP6-202ENST00000571457 TAF1LQ8IZX4 1826 aa15.98■□□□□ 0.15
CHMP6-202ENST00000571457 KIF3CO14782 793 aa15.97■□□□□ 0.15
CHMP6-202ENST00000571457 FBLN1P23142 703 aa15.97■□□□□ 0.15
CHMP6-202ENST00000571457 USHBP1Q8N6Y0 703 aa15.97■□□□□ 0.15
CHMP6-202ENST00000571457 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.96■□□□□ 0.15
CHMP6-202ENST00000571457 SSFA2P28290 1259 aa15.96■□□□□ 0.15
CHMP6-202ENST00000571457 C4BP0C0L5 1744 aa15.96■□□□□ 0.15
CHMP6-202ENST00000571457 PHF14O94880 888 aa15.95■□□□□ 0.14
CHMP6-202ENST00000571457 RRS1Q15050 365 aaKnown RBP15.95■□□□□ 0.14
CHMP6-202ENST00000571457 WWC3Q9ULE0 1092 aa15.95■□□□□ 0.14
CHMP6-202ENST00000571457 TOMM70O94826 608 aa15.94■□□□□ 0.14
CHMP6-202ENST00000571457 INSRP06213 1382 aa15.93■□□□□ 0.14
CHMP6-202ENST00000571457 CYP27B1O15528 508 aa15.93■□□□□ 0.14
CHMP6-202ENST00000571457 UBR3Q6ZT12 1888 aa15.93■□□□□ 0.14
CHMP6-202ENST00000571457 KIF24Q5T7B8 1368 aa15.91■□□□□ 0.14
CHMP6-202ENST00000571457 CICQ96RK0 1608 aaPredicted RBP15.91■□□□□ 0.14
CHMP6-202ENST00000571457 AMIGO3Q86WK7 504 aa15.91■□□□□ 0.14
CHMP6-202ENST00000571457 PIGBQ92521 554 aa15.91■□□□□ 0.14
CHMP6-202ENST00000571457 FLT4P35916 1363 aa15.9■□□□□ 0.14
CHMP6-202ENST00000571457 LOC102724428A0A0B4J2F2 783 aa15.9■□□□□ 0.14
CHMP6-202ENST00000571457 FYB1O15117 783 aa15.9■□□□□ 0.14
CHMP6-202ENST00000571457 SIK1P57059 783 aa15.9■□□□□ 0.14
CHMP6-202ENST00000571457 HSP90AB2PQ58FF8 381 aa15.9■□□□□ 0.14
CHMP6-202ENST00000571457 DNAJC5GQ8N7S2 189 aa15.9■□□□□ 0.14
CHMP6-202ENST00000571457 GGNBP2Q9H3C7 697 aa15.9■□□□□ 0.14
CHMP6-202ENST00000571457 TOGARAM1Q9Y4F4 1720 aa15.9■□□□□ 0.14
CHMP6-202ENST00000571457 ITGB4P16144 1822 aa15.89■□□□□ 0.13
CHMP6-202ENST00000571457 TGFB2P61812 414 aa15.89■□□□□ 0.13
CHMP6-202ENST00000571457 NKX1-1Q15270 411 aaPredicted RBP15.89■□□□□ 0.13
CHMP6-202ENST00000571457 TESK2Q96S53 571 aa15.89■□□□□ 0.13
CHMP6-202ENST00000571457 ST20-MTHFSA0A0A6YYL1 179 aa15.88■□□□□ 0.13
CHMP6-202ENST00000571457 GNPATO15228 680 aa15.88■□□□□ 0.13
CHMP6-202ENST00000571457 MMP10P09238 476 aa15.88■□□□□ 0.13
CHMP6-202ENST00000571457 SMIM5Q71RC9 77 aa15.88■□□□□ 0.13
CHMP6-202ENST00000571457 LINC00116Q8NCU8 138 aa15.88■□□□□ 0.13
CHMP6-202ENST00000571457 SPG7Q9UQ90 795 aa15.88■□□□□ 0.13
CHMP6-202ENST00000571457 TMOD3Q9NYL9 352 aa15.87■□□□□ 0.13
CHMP6-202ENST00000571457 BCS1LQ9Y276 419 aa15.87■□□□□ 0.13
CHMP6-202ENST00000571457 ARHGAP27Q6ZUM4 889 aa15.86■□□□□ 0.13
CHMP6-202ENST00000571457 NLGN1Q8N2Q7 840 aa15.86■□□□□ 0.13
CHMP6-202ENST00000571457 TONSLQ96HA7 1378 aa15.86■□□□□ 0.13
CHMP6-202ENST00000571457 PXDNLA1KZ92 1463 aa15.85■□□□□ 0.13
CHMP6-202ENST00000571457 MAP2P11137 1827 aaKnown RBP15.85■□□□□ 0.13
CHMP6-202ENST00000571457 ATP6V1AP38606 617 aa15.85■□□□□ 0.13
CHMP6-202ENST00000571457 C16orf71Q8IYS4 520 aaPredicted RBP15.85■□□□□ 0.13
CHMP6-202ENST00000571457 RBM46Q8TBY0 533 aaKnown RBP15.85■□□□□ 0.13
CHMP6-202ENST00000571457 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.85■□□□□ 0.13
CHMP6-202ENST00000571457 PKD1L3Q7Z443 1732 aa15.85■□□□□ 0.13
CHMP6-202ENST00000571457 A0A0G2JLW4 131 aa15.84■□□□□ 0.13
CHMP6-202ENST00000571457 TMF1P82094 1093 aa15.84■□□□□ 0.13
CHMP6-202ENST00000571457 TRAPPC3LQ5T215 181 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms