RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PKD1L3Q7Z443 1732 aa23.62■■□□□ 1.37
MAP1LC3B-208ENST00000570189 ANO8Q9HCE9 1232 aaPredicted RBP23.62■■□□□ 1.37
MAP1LC3B-208ENST00000570189 ZCRB1Q8TBF4 217 aaKnown RBP23.61■■□□□ 1.37
MAP1LC3B-208ENST00000570189 NSD2O96028 1365 aa23.61■■□□□ 1.37
MAP1LC3B-208ENST00000570189 LY75O60449 1722 aa23.61■■□□□ 1.37
MAP1LC3B-208ENST00000570189 WASHC2AQ641Q2 1341 aa23.6■■□□□ 1.37
MAP1LC3B-208ENST00000570189 ACSBG1Q96GR2 724 aa23.6■■□□□ 1.37
MAP1LC3B-208ENST00000570189 EMILIN1Q9Y6C2 1016 aa23.6■■□□□ 1.37
MAP1LC3B-208ENST00000570189 QSER1Q2KHR3 1735 aa23.59■■□□□ 1.37
MAP1LC3B-208ENST00000570189 PLEKHG2Q9H7P9 1386 aa23.58■■□□□ 1.37
MAP1LC3B-208ENST00000570189 DDX54Q8TDD1 881 aaKnown RBP23.58■■□□□ 1.37
MAP1LC3B-208ENST00000570189 RAPGEF4Q8WZA2 1011 aa23.57■■□□□ 1.36
MAP1LC3B-208ENST00000570189 PANK3Q9H999 370 aa23.55■■□□□ 1.36
MAP1LC3B-208ENST00000570189 POLKQ9UBT6 870 aa23.55■■□□□ 1.36
MAP1LC3B-208ENST00000570189 TATP17735 454 aaPredicted RBP23.54■■□□□ 1.36
MAP1LC3B-208ENST00000570189 SLC15A2Q16348 729 aa23.54■■□□□ 1.36
MAP1LC3B-208ENST00000570189 SPON1Q9HCB6 807 aa23.54■■□□□ 1.36
MAP1LC3B-208ENST00000570189 USHBP1Q8N6Y0 703 aa23.53■■□□□ 1.36
MAP1LC3B-208ENST00000570189 STK32BQ9NY57 414 aa23.53■■□□□ 1.36
MAP1LC3B-208ENST00000570189 PCDH11XQ9BZA7 1347 aa23.53■■□□□ 1.36
MAP1LC3B-208ENST00000570189 PCDH11YQ9BZA8 1340 aa23.53■■□□□ 1.36
MAP1LC3B-208ENST00000570189 SLC27A3Q5K4L6 730 aa23.52■■□□□ 1.36
MAP1LC3B-208ENST00000570189 POLR3GLQ9BT43 218 aa23.52■■□□□ 1.36
MAP1LC3B-208ENST00000570189 ITGB4P16144 1822 aa23.5■■□□□ 1.35
MAP1LC3B-208ENST00000570189 TOGARAM1Q9Y4F4 1720 aa23.5■■□□□ 1.35
MAP1LC3B-208ENST00000570189 PRIM1P49642 420 aaKnown RBP23.49■■□□□ 1.35
MAP1LC3B-208ENST00000570189 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.49■■□□□ 1.35
MAP1LC3B-208ENST00000570189 COL24A1Q17RW2 1714 aa23.48■■□□□ 1.35
MAP1LC3B-208ENST00000570189 LRRC4BQ9NT99 713 aa23.48■■□□□ 1.35
MAP1LC3B-208ENST00000570189 PPM1GO15355 546 aaPredicted RBP23.47■■□□□ 1.35
MAP1LC3B-208ENST00000570189 TUBGCP6Q96RT7 1819 aa23.47■■□□□ 1.35
MAP1LC3B-208ENST00000570189 KIF7Q2M1P5 1343 aa23.46■■□□□ 1.35
MAP1LC3B-208ENST00000570189 EYA1Q99502 592 aa23.46■■□□□ 1.35
MAP1LC3B-208ENST00000570189 CYP27B1O15528 508 aa23.45■■□□□ 1.34
MAP1LC3B-208ENST00000570189 NKX1-1Q15270 411 aaPredicted RBP23.45■■□□□ 1.34
MAP1LC3B-208ENST00000570189 PDGFDQ9GZP0 370 aaPredicted RBP23.45■■□□□ 1.34
MAP1LC3B-208ENST00000570189 AKT1S1Q96B36 256 aa23.44■■□□□ 1.34
MAP1LC3B-208ENST00000570189 TAF1LQ8IZX4 1826 aa23.44■■□□□ 1.34
MAP1LC3B-208ENST00000570189 IGSF1Q8N6C5 1336 aa23.43■■□□□ 1.34
MAP1LC3B-208ENST00000570189 EIF4A2Q14240 407 aaKnown RBP23.43■■□□□ 1.34
MAP1LC3B-208ENST00000570189 SYTL4Q96C24 671 aaPredicted RBP23.43■■□□□ 1.34
MAP1LC3B-208ENST00000570189 KNSTRNQ9Y448 316 aa23.43■■□□□ 1.34
MAP1LC3B-208ENST00000570189 PTGER2P43116 358 aa23.42■■□□□ 1.34
MAP1LC3B-208ENST00000570189 ZNF827Q17R98 1081 aa23.42■■□□□ 1.34
MAP1LC3B-208ENST00000570189 MTFR1LQ9H019 292 aa23.42■■□□□ 1.34
MAP1LC3B-208ENST00000570189 SPG7Q9UQ90 795 aa23.42■■□□□ 1.34
MAP1LC3B-208ENST00000570189 C5P01031 1676 aa23.41■■□□□ 1.34
MAP1LC3B-208ENST00000570189 HMGB2P26583 209 aaKnown RBP23.41■■□□□ 1.34
MAP1LC3B-208ENST00000570189 AMER1Q5JTC6 1135 aaPredicted RBP23.41■■□□□ 1.34
MAP1LC3B-208ENST00000570189 SGIP1Q9BQI5 828 aa23.4■■□□□ 1.34
MAP1LC3B-208ENST00000570189 TNNT2P45379 298 aaPredicted RBP23.39■■□□□ 1.33
MAP1LC3B-208ENST00000570189 MORC1Q86VD1 984 aa23.39■■□□□ 1.33
MAP1LC3B-208ENST00000570189 PPP1R1BQ9UD71 204 aaPredicted RBP23.39■■□□□ 1.33
MAP1LC3B-208ENST00000570189 ZBTB7AO95365 584 aa23.38■■□□□ 1.33
MAP1LC3B-208ENST00000570189 SLC16A10Q8TF71 515 aa23.38■■□□□ 1.33
MAP1LC3B-208ENST00000570189 PER1O15534 1290 aaPredicted RBP23.37■■□□□ 1.33
MAP1LC3B-208ENST00000570189 NPC1L1Q9UHC9 1359 aa23.36■■□□□ 1.33
MAP1LC3B-208ENST00000570189 CCNL1Q9UK58 526 aaPredicted RBP23.35■■□□□ 1.33
MAP1LC3B-208ENST00000570189 IFNL2Q8IZJ0 200 aa23.34■■□□□ 1.33
MAP1LC3B-208ENST00000570189 SMARCC1Q92922 1105 aaPredicted RBP23.34■■□□□ 1.33
MAP1LC3B-208ENST00000570189 KDRP35968 1356 aa23.34■■□□□ 1.33
MAP1LC3B-208ENST00000570189 PALLDQ8WX93 1383 aa23.34■■□□□ 1.33
MAP1LC3B-208ENST00000570189 PNPLA7Q6ZV29 1317 aa23.33■■□□□ 1.33
MAP1LC3B-208ENST00000570189 ZNF831Q5JPB2 1677 aa23.33■■□□□ 1.33
MAP1LC3B-208ENST00000570189 MAP3K5Q99683 1374 aa23.33■■□□□ 1.33
MAP1LC3B-208ENST00000570189 PHKG2P15735 406 aa23.33■■□□□ 1.33
MAP1LC3B-208ENST00000570189 ATF5Q9Y2D1 282 aaPredicted RBP23.32■■□□□ 1.32
MAP1LC3B-208ENST00000570189 MPRIPQ6WCQ1 1025 aa23.31■■□□□ 1.32
MAP1LC3B-208ENST00000570189 C4BP0C0L5 1744 aa23.3■■□□□ 1.32
MAP1LC3B-208ENST00000570189 PIGBQ92521 554 aa23.3■■□□□ 1.32
MAP1LC3B-208ENST00000570189 TFCP2L1Q9NZI6 479 aa23.3■■□□□ 1.32
MAP1LC3B-208ENST00000570189 KCNQ4P56696 695 aa23.29■■□□□ 1.32
MAP1LC3B-208ENST00000570189 UBR3Q6ZT12 1888 aa23.29■■□□□ 1.32
MAP1LC3B-208ENST00000570189 AMOTQ4VCS5 1084 aa23.28■■□□□ 1.32
MAP1LC3B-208ENST00000570189 HSP90AB1P08238 724 aaKnown RBP23.27■■□□□ 1.32
MAP1LC3B-208ENST00000570189 IL13P35225 146 aa23.27■■□□□ 1.32
MAP1LC3B-208ENST00000570189 PLEKHO1Q53GL0 409 aaPredicted RBP23.26■■□□□ 1.31
MAP1LC3B-208ENST00000570189 TMOD3Q9NYL9 352 aa23.26■■□□□ 1.31
MAP1LC3B-208ENST00000570189 ERVV-2B6SEH9 535 aa23.25■■□□□ 1.31
MAP1LC3B-208ENST00000570189 DCAF5Q96JK2 942 aa23.25■■□□□ 1.31
MAP1LC3B-208ENST00000570189 ARXQ96QS3 562 aa23.25■■□□□ 1.31
MAP1LC3B-208ENST00000570189 SCN11AQ9UI33 1791 aa23.24■■□□□ 1.31
MAP1LC3B-208ENST00000570189 FLAD1Q8NFF5 587 aa23.24■■□□□ 1.31
MAP1LC3B-208ENST00000570189 SYT17Q9BSW7 474 aa23.24■■□□□ 1.31
MAP1LC3B-208ENST00000570189 FHDC1Q9C0D6 1143 aaPredicted RBP23.24■■□□□ 1.31
MAP1LC3B-208ENST00000570189 KDM6AO15550 1401 aaPredicted RBP23.23■■□□□ 1.31
MAP1LC3B-208ENST00000570189 MTHFSP49914 203 aa23.22■■□□□ 1.31
MAP1LC3B-208ENST00000570189 AEBP1Q8IUX7 1158 aa23.22■■□□□ 1.31
MAP1LC3B-208ENST00000570189 CICQ96RK0 1608 aaPredicted RBP23.22■■□□□ 1.31
MAP1LC3B-208ENST00000570189 VIRMAQ69YN4 1812 aaKnown RBP23.22■■□□□ 1.31
MAP1LC3B-208ENST00000570189 COL5A3P25940 1745 aaPredicted RBP23.21■■□□□ 1.31
MAP1LC3B-208ENST00000570189 COL3A1P02461 1466 aaPredicted RBP23.2■■□□□ 1.3
MAP1LC3B-208ENST00000570189 LOC102724428A0A0B4J2F2 783 aa23.2■■□□□ 1.3
MAP1LC3B-208ENST00000570189 DCAF8L1A6NGE4 600 aa23.2■■□□□ 1.3
MAP1LC3B-208ENST00000570189 POLD1P28340 1107 aa23.2■■□□□ 1.3
MAP1LC3B-208ENST00000570189 SIK1P57059 783 aa23.2■■□□□ 1.3
MAP1LC3B-208ENST00000570189 SULT6B1Q6IMI4 303 aa23.2■■□□□ 1.3
MAP1LC3B-208ENST00000570189 COL23A1Q86Y22 540 aaPredicted RBP23.2■■□□□ 1.3
MAP1LC3B-208ENST00000570189 ADAMTS7Q9UKP4 1686 aa23.19■■□□□ 1.3
MAP1LC3B-208ENST00000570189 ZNF530Q6P9A1 599 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms