RNA–Protein interactions for RNA: ENST00000568672.1

NAE1-219, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-219ENST00000568672 USP47Q96K76 1375 aa11.46□□□□□ -0.57
NAE1-219ENST00000568672 COL9A1P20849 921 aa11.46□□□□□ -0.57
NAE1-219ENST00000568672 NUDT16Q96DE0 195 aaKnown RBP11.46□□□□□ -0.57
NAE1-219ENST00000568672 EPAS1Q99814 870 aa11.46□□□□□ -0.57
NAE1-219ENST00000568672 ZBED2Q9BTP6 218 aa11.46□□□□□ -0.57
NAE1-219ENST00000568672 QRICH2Q9H0J4 1663 aa11.46□□□□□ -0.58
NAE1-219ENST00000568672 RGPD8O14715 1765 aaPredicted RBP11.45□□□□□ -0.58
NAE1-219ENST00000568672 GRXCR2A6NFK2 248 aa11.44□□□□□ -0.58
NAE1-219ENST00000568672 HSPA5P11021 654 aaKnown RBP11.44□□□□□ -0.58
NAE1-219ENST00000568672 SRPK2P78362 688 aaKnown RBP11.44□□□□□ -0.58
NAE1-219ENST00000568672 KCNV2Q8TDN2 545 aa11.44□□□□□ -0.58
NAE1-219ENST00000568672 ARIH1Q9Y4X5 557 aaPredicted RBP11.44□□□□□ -0.58
NAE1-219ENST00000568672 PPP1R3GB7ZBB8 358 aa11.43□□□□□ -0.58
NAE1-219ENST00000568672 ATP7BP35670 1465 aa11.43□□□□□ -0.58
NAE1-219ENST00000568672 EIF3AQ14152 1382 aaKnown RBP11.42□□□□□ -0.58
NAE1-219ENST00000568672 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
NAE1-219ENST00000568672 PROX2Q3B8N5 592 aa11.42□□□□□ -0.58
NAE1-219ENST00000568672 C6orf132Q5T0Z8 1188 aa11.42□□□□□ -0.58
NAE1-219ENST00000568672 ANKARQ7Z5J8 1434 aa11.42□□□□□ -0.58
NAE1-219ENST00000568672 DISP3Q9P2K9 1392 aa11.41□□□□□ -0.58
NAE1-219ENST00000568672 SOS2Q07890 1332 aaPredicted RBP11.41□□□□□ -0.58
NAE1-219ENST00000568672 EVC2Q86UK5 1308 aa11.41□□□□□ -0.58
NAE1-219ENST00000568672 MAP3K7O43318 606 aa11.41□□□□□ -0.58
NAE1-219ENST00000568672 KRT28Q7Z3Y7 464 aa11.41□□□□□ -0.58
NAE1-219ENST00000568672 SLC4A5Q9BY07 1137 aa11.41□□□□□ -0.58
NAE1-219ENST00000568672 CABP1Q9NZU7 370 aa11.41□□□□□ -0.58
NAE1-219ENST00000568672 COL16A1Q07092 1604 aaPredicted RBP11.41□□□□□ -0.58
NAE1-219ENST00000568672 AHDC1Q5TGY3 1603 aaPredicted RBP11.41□□□□□ -0.58
NAE1-219ENST00000568672 PHLPP1O60346 1717 aa11.4□□□□□ -0.58
NAE1-219ENST00000568672 C11orf95C9JLR9 678 aaPredicted RBP11.4□□□□□ -0.58
NAE1-219ENST00000568672 TSR1Q2NL82 804 aaKnown RBP11.4□□□□□ -0.58
NAE1-219ENST00000568672 KCTD12Q96CX2 325 aaKnown RBP11.4□□□□□ -0.58
NAE1-219ENST00000568672 PXDNQ92626 1479 aa11.39□□□□□ -0.59
NAE1-219ENST00000568672 NHSL1Q5SYE7 1610 aa11.39□□□□□ -0.59
NAE1-219ENST00000568672 PRIM1P49642 420 aaKnown RBP11.39□□□□□ -0.59
NAE1-219ENST00000568672 EN1Q05925 392 aaPredicted RBP11.39□□□□□ -0.59
NAE1-219ENST00000568672 SLC12A5Q9H2X9 1139 aa11.39□□□□□ -0.59
NAE1-219ENST00000568672 SBNO2Q9Y2G9 1366 aa11.39□□□□□ -0.59
NAE1-219ENST00000568672 ACEP12821 1306 aa11.38□□□□□ -0.59
NAE1-219ENST00000568672 PPIP5K1Q6PFW1 1433 aa11.38□□□□□ -0.59
NAE1-219ENST00000568672 PLEKHG3A1L390 1219 aa11.38□□□□□ -0.59
NAE1-219ENST00000568672 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
NAE1-219ENST00000568672 PSME1Q06323 249 aa11.38□□□□□ -0.59
NAE1-219ENST00000568672 NGDNQ8NEJ9 315 aaKnown RBP11.38□□□□□ -0.59
NAE1-219ENST00000568672 NPHP3Q7Z494 1330 aa11.37□□□□□ -0.59
NAE1-219ENST00000568672 NUTM2BA6NNL0 878 aaPredicted RBP11.36□□□□□ -0.59
NAE1-219ENST00000568672 NUTM2EB1AL46 878 aaPredicted RBP11.36□□□□□ -0.59
NAE1-219ENST00000568672 NUTM2AQ8IVF1 878 aaPredicted RBP11.36□□□□□ -0.59
NAE1-219ENST00000568672 TMC1Q8TDI8 760 aa11.36□□□□□ -0.59
NAE1-219ENST00000568672 CABLES1Q8TDN4 633 aa11.36□□□□□ -0.59
NAE1-219ENST00000568672 LRRC59Q96AG4 307 aaKnown RBP11.36□□□□□ -0.59
NAE1-219ENST00000568672 PNPLA6Q8IY17 1366 aa11.36□□□□□ -0.59
NAE1-219ENST00000568672 TOPAZ1Q8N9V7 1692 aa11.36□□□□□ -0.59
NAE1-219ENST00000568672 SPATA31A3Q5VYP0 1347 aa11.35□□□□□ -0.59
NAE1-219ENST00000568672 BHMG1C9JSJ3 638 aaPredicted RBP11.35□□□□□ -0.59
NAE1-219ENST00000568672 NUTM2GQ5VZR2 741 aa11.35□□□□□ -0.59
NAE1-219ENST00000568672 MRPL50Q8N5N7 158 aaKnown RBP11.35□□□□□ -0.59
NAE1-219ENST00000568672 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
NAE1-219ENST00000568672 POLR3AO14802 1390 aaPredicted RBP11.35□□□□□ -0.59
NAE1-219ENST00000568672 KIF1AQ12756 1690 aa11.34□□□□□ -0.59
NAE1-219ENST00000568672 JCADQ9P266 1359 aa11.34□□□□□ -0.59
NAE1-219ENST00000568672 TMF1P82094 1093 aa11.34□□□□□ -0.59
NAE1-219ENST00000568672 LMOD2Q6P5Q4 547 aa11.34□□□□□ -0.59
NAE1-219ENST00000568672 POLR3GLQ9BT43 218 aa11.34□□□□□ -0.59
NAE1-219ENST00000568672 LRP6O75581 1613 aa11.34□□□□□ -0.59
NAE1-219ENST00000568672 CD163L1Q9NR16 1453 aa11.33□□□□□ -0.6
NAE1-219ENST00000568672 GOLGA8CPA6NN73 597 aa11.33□□□□□ -0.6
NAE1-219ENST00000568672 NBPF3Q9H094 633 aa11.33□□□□□ -0.6
NAE1-219ENST00000568672 ATAD2Q6PL18 1390 aa11.32□□□□□ -0.6
NAE1-219ENST00000568672 OSBPP22059 807 aa11.32□□□□□ -0.6
NAE1-219ENST00000568672 MLLT3P42568 568 aaPredicted RBP11.32□□□□□ -0.6
NAE1-219ENST00000568672 CDHR5Q9HBB8 845 aa11.32□□□□□ -0.6
NAE1-219ENST00000568672 SBNO1A3KN83 1393 aa11.31□□□□□ -0.6
NAE1-219ENST00000568672 ADAMTS2O95450 1211 aa11.31□□□□□ -0.6
NAE1-219ENST00000568672 PUS7Q96PZ0 661 aaKnown RBP11.31□□□□□ -0.6
NAE1-219ENST00000568672 KIAA1468Q9P260 1216 aa11.31□□□□□ -0.6
NAE1-219ENST00000568672 RABGEF1Q9UJ41 708 aa11.31□□□□□ -0.6
NAE1-219ENST00000568672 CPSF1Q10570 1443 aaKnown RBP11.31□□□□□ -0.6
NAE1-219ENST00000568672 TNS3Q68CZ2 1445 aa11.31□□□□□ -0.6
NAE1-219ENST00000568672 SSH2Q76I76 1423 aa11.31□□□□□ -0.6
NAE1-219ENST00000568672 TRPM3Q9HCF6 1732 aaPredicted RBP11.31□□□□□ -0.6
NAE1-219ENST00000568672 USP6P35125 1406 aa11.3□□□□□ -0.6
NAE1-219ENST00000568672 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.3□□□□□ -0.6
NAE1-219ENST00000568672 HCSTQ9UBK5 93 aa11.3□□□□□ -0.6
NAE1-219ENST00000568672 A0A1W2PP64 1363 aa11.29□□□□□ -0.6
NAE1-219ENST00000568672 ITSN1Q15811 1721 aa11.29□□□□□ -0.6
NAE1-219ENST00000568672 MED1Q15648 1581 aaPredicted RBP11.29□□□□□ -0.6
NAE1-219ENST00000568672 TRIM6-TRIM34B2RNG4 842 aa11.29□□□□□ -0.6
NAE1-219ENST00000568672 PTPN5P54829 565 aa11.29□□□□□ -0.6
NAE1-219ENST00000568672 CARD14Q9BXL6 1004 aa11.29□□□□□ -0.6
NAE1-219ENST00000568672 RGS17Q9UGC6 210 aaPredicted RBP11.29□□□□□ -0.6
NAE1-219ENST00000568672 SEPT9Q9UHD8 586 aaPredicted RBP11.29□□□□□ -0.6
NAE1-219ENST00000568672 SHPRHQ149N8 1683 aa11.29□□□□□ -0.6
NAE1-219ENST00000568672 KIF7Q2M1P5 1343 aa11.29□□□□□ -0.6
NAE1-219ENST00000568672 TTC21BQ7Z4L5 1316 aa11.29□□□□□ -0.6
NAE1-219ENST00000568672 KTN1Q86UP2 1357 aaKnown RBP11.28□□□□□ -0.6
NAE1-219ENST00000568672 NME9Q86XW9 330 aa11.28□□□□□ -0.6
NAE1-219ENST00000568672 WNT2BQ93097 391 aa11.28□□□□□ -0.6
NAE1-219ENST00000568672 SPATA31A6Q5VVP1 1343 aa11.28□□□□□ -0.6
NAE1-219ENST00000568672 ABTB2Q8N961 1025 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms