RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 PER1O15534 1290 aaPredicted RBP23.42■■□□□ 1.34
KNOP1-205ENST00000568230 PLSCR1O15162 318 aa23.4■■□□□ 1.34
KNOP1-205ENST00000568230 ZCRB1Q8TBF4 217 aaKnown RBP23.4■■□□□ 1.34
KNOP1-205ENST00000568230 RAPGEF4Q8WZA2 1011 aa23.4■■□□□ 1.34
KNOP1-205ENST00000568230 PKD1L3Q7Z443 1732 aa23.39■■□□□ 1.34
KNOP1-205ENST00000568230 KCNQ2O43526 872 aa23.38■■□□□ 1.33
KNOP1-205ENST00000568230 DDX54Q8TDD1 881 aaKnown RBP23.38■■□□□ 1.33
KNOP1-205ENST00000568230 BTAF1O14981 1849 aa23.38■■□□□ 1.33
KNOP1-205ENST00000568230 NPC1L1Q9UHC9 1359 aa23.38■■□□□ 1.33
KNOP1-205ENST00000568230 TATP17735 454 aaPredicted RBP23.37■■□□□ 1.33
KNOP1-205ENST00000568230 EIF4A2Q14240 407 aaKnown RBP23.37■■□□□ 1.33
KNOP1-205ENST00000568230 DOT1LQ8TEK3 1739 aa23.37■■□□□ 1.33
KNOP1-205ENST00000568230 ACSBG1Q96GR2 724 aa23.36■■□□□ 1.33
KNOP1-205ENST00000568230 EYA1Q99502 592 aa23.36■■□□□ 1.33
KNOP1-205ENST00000568230 KAT6BQ8WYB5 2073 aa23.36■■□□□ 1.33
KNOP1-205ENST00000568230 PSDA5PKW4 1024 aaPredicted RBP23.33■■□□□ 1.33
KNOP1-205ENST00000568230 PCDH11XQ9BZA7 1347 aa23.33■■□□□ 1.33
KNOP1-205ENST00000568230 PCDH11YQ9BZA8 1340 aa23.33■■□□□ 1.33
KNOP1-205ENST00000568230 PLEKHG2Q9H7P9 1386 aa23.33■■□□□ 1.33
KNOP1-205ENST00000568230 IGSF1Q8N6C5 1336 aa23.32■■□□□ 1.32
KNOP1-205ENST00000568230 R3HDM1Q15032 1099 aaKnown RBP23.32■■□□□ 1.32
KNOP1-205ENST00000568230 CC2D1BQ5T0F9 858 aaKnown RBP23.31■■□□□ 1.32
KNOP1-205ENST00000568230 PROM2Q8N271 834 aa23.31■■□□□ 1.32
KNOP1-205ENST00000568230 LRP5O75197 1615 aa23.3■■□□□ 1.32
KNOP1-205ENST00000568230 CYP27B1O15528 508 aa23.29■■□□□ 1.32
KNOP1-205ENST00000568230 NBPF14Q5TI25 921 aa23.29■■□□□ 1.32
KNOP1-205ENST00000568230 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.29■■□□□ 1.324e-8■■■■□ 20.7
KNOP1-205ENST00000568230 TXNRD1Q16881 649 aa23.28■■□□□ 1.32
KNOP1-205ENST00000568230 TOGARAM1Q9Y4F4 1720 aa23.27■■□□□ 1.32
KNOP1-205ENST00000568230 PRIM1P49642 420 aaKnown RBP23.27■■□□□ 1.32
KNOP1-205ENST00000568230 PAPPAQ13219 1627 aa23.26■■□□□ 1.31
KNOP1-205ENST00000568230 ANO8Q9HCE9 1232 aaPredicted RBP23.26■■□□□ 1.31
KNOP1-205ENST00000568230 MTHFSP49914 203 aa23.25■■□□□ 1.31
KNOP1-205ENST00000568230 SPG7Q9UQ90 795 aa23.25■■□□□ 1.31
KNOP1-205ENST00000568230 IL13P35225 146 aa23.24■■□□□ 1.31
KNOP1-205ENST00000568230 SYTL4Q96C24 671 aaPredicted RBP23.24■■□□□ 1.31
KNOP1-205ENST00000568230 KDRP35968 1356 aa23.24■■□□□ 1.31
KNOP1-205ENST00000568230 LY75O60449 1722 aa23.23■■□□□ 1.31
KNOP1-205ENST00000568230 NKX1-1Q15270 411 aaPredicted RBP23.22■■□□□ 1.31
KNOP1-205ENST00000568230 AEBP1Q8IUX7 1158 aa23.21■■□□□ 1.31
KNOP1-205ENST00000568230 COL3A1P02461 1466 aaPredicted RBP23.21■■□□□ 1.31
KNOP1-205ENST00000568230 ITGB4P16144 1822 aa23.21■■□□□ 1.31
KNOP1-205ENST00000568230 CASZ1Q86V15 1759 aa23.2■■□□□ 1.3
KNOP1-205ENST00000568230 PHKG2P15735 406 aa23.18■■□□□ 1.3
KNOP1-205ENST00000568230 SLC27A3Q5K4L6 730 aa23.18■■□□□ 1.3
KNOP1-205ENST00000568230 SULT6B1Q6IMI4 303 aa23.17■■□□□ 1.3
KNOP1-205ENST00000568230 IFNL2Q8IZJ0 200 aa23.17■■□□□ 1.3
KNOP1-205ENST00000568230 LRRC4BQ9NT99 713 aa23.17■■□□□ 1.3
KNOP1-205ENST00000568230 CNGB1Q14028 1251 aaPredicted RBP23.16■■□□□ 1.3
KNOP1-205ENST00000568230 SLC15A2Q16348 729 aa23.15■■□□□ 1.3
KNOP1-205ENST00000568230 STK32BQ9NY57 414 aa23.15■■□□□ 1.3
KNOP1-205ENST00000568230 DIAPH1O60610 1272 aaKnown RBP23.14■■□□□ 1.3
KNOP1-205ENST00000568230 AMOTQ4VCS5 1084 aa23.14■■□□□ 1.3
KNOP1-205ENST00000568230 PLEKHO1Q53GL0 409 aaPredicted RBP23.14■■□□□ 1.3
KNOP1-205ENST00000568230 MPRIPQ6WCQ1 1025 aa23.13■■□□□ 1.29
KNOP1-205ENST00000568230 PALLDQ8WX93 1383 aa23.11■■□□□ 1.29
KNOP1-205ENST00000568230 QSER1Q2KHR3 1735 aa23.11■■□□□ 1.29
KNOP1-205ENST00000568230 ZNF827Q17R98 1081 aa23.1■■□□□ 1.29
KNOP1-205ENST00000568230 ZNF530Q6P9A1 599 aaPredicted RBP23.1■■□□□ 1.29
KNOP1-205ENST00000568230 PIGBQ92521 554 aa23.1■■□□□ 1.29
KNOP1-205ENST00000568230 KDM6AO15550 1401 aaPredicted RBP23.1■■□□□ 1.29
KNOP1-205ENST00000568230 HSP90AB1P08238 724 aaKnown RBP23.09■■□□□ 1.29
KNOP1-205ENST00000568230 CCNL1Q9UK58 526 aaPredicted RBP23.09■■□□□ 1.29
KNOP1-205ENST00000568230 C5P01031 1676 aa23.09■■□□□ 1.29
KNOP1-205ENST00000568230 AKT1S1Q96B36 256 aa23.08■■□□□ 1.29
KNOP1-205ENST00000568230 DCAF5Q96JK2 942 aa23.08■■□□□ 1.29
KNOP1-205ENST00000568230 PDGFDQ9GZP0 370 aaPredicted RBP23.08■■□□□ 1.29
KNOP1-205ENST00000568230 TMOD3Q9NYL9 352 aa23.08■■□□□ 1.29
KNOP1-205ENST00000568230 HMOX1P09601 288 aa23.08■■□□□ 1.28
KNOP1-205ENST00000568230 PPP2R1AP30153 589 aa23.08■■□□□ 1.28
KNOP1-205ENST00000568230 KCNQ4P56696 695 aa23.08■■□□□ 1.28
KNOP1-205ENST00000568230 SMARCC1Q92922 1105 aaPredicted RBP23.08■■□□□ 1.28
KNOP1-205ENST00000568230 TUBGCP6Q96RT7 1819 aa23.07■■□□□ 1.28
KNOP1-205ENST00000568230 TAF1LQ8IZX4 1826 aa23.07■■□□□ 1.28
KNOP1-205ENST00000568230 ERVV-2B6SEH9 535 aa23.06■■□□□ 1.28
KNOP1-205ENST00000568230 C1orf141Q5JVX7 400 aa23.05■■□□□ 1.28
KNOP1-205ENST00000568230 CFAP53Q96M91 514 aa23.05■■□□□ 1.28
KNOP1-205ENST00000568230 SPON1Q9HCB6 807 aa23.05■■□□□ 1.28
KNOP1-205ENST00000568230 SCN11AQ9UI33 1791 aa23.04■■□□□ 1.28
KNOP1-205ENST00000568230 ZEB1P37275 1124 aaPredicted RBP23.03■■□□□ 1.28
KNOP1-205ENST00000568230 U2SURPO15042 1029 aaKnown RBP23.02■■□□□ 1.28
KNOP1-205ENST00000568230 ZBTB7AO95365 584 aa23.01■■□□□ 1.27
KNOP1-205ENST00000568230 AKAP4Q5JQC9 854 aa23.01■■□□□ 1.27
KNOP1-205ENST00000568230 ASAP1Q9ULH1 1129 aa23.01■■□□□ 1.27
KNOP1-205ENST00000568230 ADAMTS7Q9UKP4 1686 aa23.01■■□□□ 1.27
KNOP1-205ENST00000568230 C4BP0C0L5 1744 aa23■■□□□ 1.27
KNOP1-205ENST00000568230 PNPLA7Q6ZV29 1317 aa23■■□□□ 1.27
KNOP1-205ENST00000568230 HMGB2P26583 209 aaKnown RBP23■■□□□ 1.27
KNOP1-205ENST00000568230 MTFR1LQ9H019 292 aa23■■□□□ 1.27
KNOP1-205ENST00000568230 MRC1P22897 1456 aa22.99■■□□□ 1.27
KNOP1-205ENST00000568230 LOC102724428A0A0B4J2F2 783 aa22.99■■□□□ 1.27
KNOP1-205ENST00000568230 SIK1P57059 783 aa22.99■■□□□ 1.27
KNOP1-205ENST00000568230 ATG3Q9NT62 314 aa22.99■■□□□ 1.27
KNOP1-205ENST00000568230 ZNF831Q5JPB2 1677 aa22.98■■□□□ 1.27
KNOP1-205ENST00000568230 VIRMAQ69YN4 1812 aaKnown RBP22.98■■□□□ 1.27
KNOP1-205ENST00000568230 CABP4P57796 275 aa22.98■■□□□ 1.27
KNOP1-205ENST00000568230 MTHFSDQ2M296 383 aaKnown RBP22.98■■□□□ 1.27
KNOP1-205ENST00000568230 TFCP2L1Q9NZI6 479 aa22.98■■□□□ 1.27
KNOP1-205ENST00000568230 PTGER2P43116 358 aa22.97■■□□□ 1.27
KNOP1-205ENST00000568230 DDX10Q13206 875 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms