RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.49□□□□□ -0.25
CFDP1-206ENST00000566254 DAPK1P53355 1430 aa13.48□□□□□ -0.25
CFDP1-206ENST00000566254 PBX2P40425 430 aa13.48□□□□□ -0.25
CFDP1-206ENST00000566254 NUTM2DQ5VT03 806 aaPredicted RBP13.48□□□□□ -0.25
CFDP1-206ENST00000566254 CHIC2Q9UKJ5 165 aa13.48□□□□□ -0.25
CFDP1-206ENST00000566254 TBX22Q9Y458 520 aa13.48□□□□□ -0.25
CFDP1-206ENST00000566254 C8orf37Q96NL8 207 aa13.47□□□□□ -0.25
CFDP1-206ENST00000566254 ADAMTS13Q76LX8 1427 aa13.47□□□□□ -0.25
CFDP1-206ENST00000566254 NUTM1Q86Y26 1132 aa13.46□□□□□ -0.25
CFDP1-206ENST00000566254 ZNF687Q8N1G0 1237 aa13.46□□□□□ -0.25
CFDP1-206ENST00000566254 QTRT2Q9H974 415 aaKnown RBP13.46□□□□□ -0.25
CFDP1-206ENST00000566254 LIMD1Q9UGP4 676 aa13.46□□□□□ -0.25
CFDP1-206ENST00000566254 PTPN23Q9H3S7 1636 aa13.46□□□□□ -0.26
CFDP1-206ENST00000566254 MYO5BQ9ULV0 1848 aa13.46□□□□□ -0.26
CFDP1-206ENST00000566254 ANKRD30AQ9BXX3 1397 aa13.45□□□□□ -0.26
CFDP1-206ENST00000566254 GCC2Q8IWJ2 1684 aa13.45□□□□□ -0.26
CFDP1-206ENST00000566254 HDGFP51858 240 aaKnown RBP13.45□□□□□ -0.26
CFDP1-206ENST00000566254 RIC3Q7Z5B4 369 aa13.45□□□□□ -0.26
CFDP1-206ENST00000566254 ASXL1Q8IXJ9 1541 aa13.44□□□□□ -0.26
CFDP1-206ENST00000566254 TMEM131LA2VDJ0 1609 aa13.44□□□□□ -0.26
CFDP1-206ENST00000566254 FAM205CA6NFA0 338 aa13.44□□□□□ -0.26
CFDP1-206ENST00000566254 RBM6P78332 1123 aaKnown RBP13.44□□□□□ -0.26
CFDP1-206ENST00000566254 RDH13Q8NBN7 331 aa13.44□□□□□ -0.26
CFDP1-206ENST00000566254 SEPT9Q9UHD8 586 aaPredicted RBP13.44□□□□□ -0.26
CFDP1-206ENST00000566254 SETD5Q9C0A6 1442 aa13.44□□□□□ -0.26
CFDP1-206ENST00000566254 SPTLC1O15269 473 aa13.43□□□□□ -0.26
CFDP1-206ENST00000566254 VPS9D1Q9Y2B5 631 aa13.43□□□□□ -0.26
CFDP1-206ENST00000566254 RPRD2Q5VT52 1461 aaKnown RBP13.42□□□□□ -0.26
CFDP1-206ENST00000566254 PTPRUQ92729 1446 aa13.42□□□□□ -0.26
CFDP1-206ENST00000566254 TUSC1Q2TAM9 212 aa13.42□□□□□ -0.26
CFDP1-206ENST00000566254 SWT1Q5T5J6 900 aaKnown RBP13.42□□□□□ -0.26
CFDP1-206ENST00000566254 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.42□□□□□ -0.26
CFDP1-206ENST00000566254 DDX17Q92841 729 aaKnown RBP13.42□□□□□ -0.26
CFDP1-206ENST00000566254 AMOTL2Q9Y2J4 779 aa13.42□□□□□ -0.26
CFDP1-206ENST00000566254 MOXD2PA6NHM9 499 aa13.41□□□□□ -0.26
CFDP1-206ENST00000566254 MCM6Q14566 821 aa13.41□□□□□ -0.26
CFDP1-206ENST00000566254 FAM98CQ17RN3 349 aaKnown RBP13.41□□□□□ -0.26
CFDP1-206ENST00000566254 RSBN1LQ6PCB5 846 aaPredicted RBP13.41□□□□□ -0.26
CFDP1-206ENST00000566254 PNPLA6Q8IY17 1366 aa13.41□□□□□ -0.26
CFDP1-206ENST00000566254 PIK3R4Q99570 1358 aa13.41□□□□□ -0.26
CFDP1-206ENST00000566254 DCCP43146 1447 aa13.4□□□□□ -0.26
CFDP1-206ENST00000566254 MST1RQ04912 1400 aa13.4□□□□□ -0.26
CFDP1-206ENST00000566254 LRRC59Q96AG4 307 aaKnown RBP13.4□□□□□ -0.26
CFDP1-206ENST00000566254 ATAD2Q6PL18 1390 aa13.4□□□□□ -0.26
CFDP1-206ENST00000566254 ADAMTS2O95450 1211 aa13.39□□□□□ -0.27
CFDP1-206ENST00000566254 SLC10A3P09131 477 aa13.39□□□□□ -0.27
CFDP1-206ENST00000566254 GJA5P36382 358 aa13.39□□□□□ -0.27
CFDP1-206ENST00000566254 GCGRP47871 477 aa13.39□□□□□ -0.27
CFDP1-206ENST00000566254 PPP2R2DQ66LE6 453 aa13.39□□□□□ -0.27
CFDP1-206ENST00000566254 SETBP1Q9Y6X0 1596 aa13.39□□□□□ -0.27
CFDP1-206ENST00000566254 NHSL1Q5SYE7 1610 aa13.39□□□□□ -0.27
CFDP1-206ENST00000566254 TRPM2O94759 1503 aa13.39□□□□□ -0.27
CFDP1-206ENST00000566254 POTEB3A0JP26 581 aa13.38□□□□□ -0.27
CFDP1-206ENST00000566254 KDM4AO75164 1064 aa13.38□□□□□ -0.27
CFDP1-206ENST00000566254 NDUFV2P19404 249 aa13.38□□□□□ -0.27
CFDP1-206ENST00000566254 RFC5P40937 340 aa13.38□□□□□ -0.27
CFDP1-206ENST00000566254 POTEBQ6S5H4 581 aa13.38□□□□□ -0.27
CFDP1-206ENST00000566254 FAM163AQ96GL9 167 aaPredicted RBP13.38□□□□□ -0.27
CFDP1-206ENST00000566254 NGLY1Q96IV0 654 aa13.38□□□□□ -0.27
CFDP1-206ENST00000566254 HS3ST6Q96QI5 342 aa13.37□□□□□ -0.27
CFDP1-206ENST00000566254 USP46P62068 366 aa13.36□□□□□ -0.27
CFDP1-206ENST00000566254 LAPTM4BQ86VI4 370 aa13.36□□□□□ -0.27
CFDP1-206ENST00000566254 ANKRD50Q9ULJ7 1429 aa13.36□□□□□ -0.27
CFDP1-206ENST00000566254 BHMG1C9JSJ3 638 aaPredicted RBP13.35□□□□□ -0.27
CFDP1-206ENST00000566254 ADGRL2O95490 1459 aa13.35□□□□□ -0.27
CFDP1-206ENST00000566254 UNC13BO14795 1591 aa13.34□□□□□ -0.27
CFDP1-206ENST00000566254 TK2O00142 265 aa13.34□□□□□ -0.27
CFDP1-206ENST00000566254 NBPF3Q9H094 633 aa13.34□□□□□ -0.27
CFDP1-206ENST00000566254 USP21Q9UK80 565 aa13.34□□□□□ -0.27
CFDP1-206ENST00000566254 PCDHB15Q9Y5E8 787 aa13.34□□□□□ -0.27
CFDP1-206ENST00000566254 XRN1Q8IZH2 1706 aaKnown RBP13.33□□□□□ -0.27
CFDP1-206ENST00000566254 CSPP1Q1MSJ5 1256 aa13.33□□□□□ -0.28
CFDP1-206ENST00000566254 SAMD7Q7Z3H4 446 aa13.33□□□□□ -0.28
CFDP1-206ENST00000566254 BANK1Q8NDB2 785 aa13.33□□□□□ -0.28
CFDP1-206ENST00000566254 SPDYE5A6NIY4 337 aa13.32□□□□□ -0.28
CFDP1-206ENST00000566254 A6NJR5 290 aa13.32□□□□□ -0.28
CFDP1-206ENST00000566254 HOXA2O43364 376 aa13.32□□□□□ -0.28
CFDP1-206ENST00000566254 LILRB3O75022 631 aa13.32□□□□□ -0.28
CFDP1-206ENST00000566254 QPCTQ16769 361 aa13.32□□□□□ -0.28
CFDP1-206ENST00000566254 TMEM259Q4ZIN3 620 aa13.32□□□□□ -0.28
CFDP1-206ENST00000566254 CLUAP1Q96AJ1 413 aa13.32□□□□□ -0.28
CFDP1-206ENST00000566254 TRPC5Q9UL62 973 aaPredicted RBP13.32□□□□□ -0.28
CFDP1-206ENST00000566254 METP08581 1390 aa13.32□□□□□ -0.28
CFDP1-206ENST00000566254 ADGRL3Q9HAR2 1447 aa13.31□□□□□ -0.28
CFDP1-206ENST00000566254 SLC4A3P48751 1232 aa13.31□□□□□ -0.28
CFDP1-206ENST00000566254 SLF2Q8IX21 1173 aa13.31□□□□□ -0.28
CFDP1-206ENST00000566254 ARXQ96QS3 562 aa13.31□□□□□ -0.28
CFDP1-206ENST00000566254 NRXN3Q9Y4C0 1643 aa13.31□□□□□ -0.28
CFDP1-206ENST00000566254 E9PCH4 1651 aa13.31□□□□□ -0.28
CFDP1-206ENST00000566254 LCE2DQ5TA82 110 aaPredicted RBP13.3□□□□□ -0.28
CFDP1-206ENST00000566254 ATRNO75882 1429 aa13.3□□□□□ -0.28
CFDP1-206ENST00000566254 FAM50AQ14320 339 aaKnown RBP13.29□□□□□ -0.28
CFDP1-206ENST00000566254 FNBP4Q8N3X1 1017 aaPredicted RBP13.29□□□□□ -0.28
CFDP1-206ENST00000566254 C1orf167Q5SNV9 1468 aa13.29□□□□□ -0.28
CFDP1-206ENST00000566254 PRPF38BQ5VTL8 546 aaKnown RBP13.28□□□□□ -0.28
CFDP1-206ENST00000566254 ZFRQ96KR1 1074 aaKnown RBP13.28□□□□□ -0.28
CFDP1-206ENST00000566254 SNRKQ9NRH2 765 aa13.28□□□□□ -0.28
CFDP1-206ENST00000566254 NALCNQ8IZF0 1738 aa13.27□□□□□ -0.28
CFDP1-206ENST00000566254 EP400Q96L91 3159 aa13.27□□□□□ -0.28
CFDP1-206ENST00000566254 FDX1P10109 184 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms