RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 CASZ1Q86V15 1759 aa21■□□□□ 0.95
CMTM3-212ENST00000566121 CCER1Q8TC90 406 aaPredicted RBP20.99■□□□□ 0.95
CMTM3-212ENST00000566121 RAPGEF4Q8WZA2 1011 aa20.99■□□□□ 0.95
CMTM3-212ENST00000566121 MEGF6O75095 1541 aa20.99■□□□□ 0.95
CMTM3-212ENST00000566121 TATP17735 454 aaPredicted RBP20.97■□□□□ 0.95
CMTM3-212ENST00000566121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.97■□□□□ 0.95
CMTM3-212ENST00000566121 BTAF1O14981 1849 aa20.97■□□□□ 0.95
CMTM3-212ENST00000566121 HSPA5P11021 654 aaKnown RBP20.96■□□□□ 0.95
CMTM3-212ENST00000566121 PAPPAQ13219 1627 aa20.96■□□□□ 0.95
CMTM3-212ENST00000566121 KAT6BQ8WYB5 2073 aa20.95■□□□□ 0.94
CMTM3-212ENST00000566121 PTGER2P43116 358 aa20.95■□□□□ 0.94
CMTM3-212ENST00000566121 PRIM1P49642 420 aaKnown RBP20.95■□□□□ 0.94
CMTM3-212ENST00000566121 MTFR1LQ9H019 292 aa20.95■□□□□ 0.94
CMTM3-212ENST00000566121 LRRC4BQ9NT99 713 aa20.95■□□□□ 0.94
CMTM3-212ENST00000566121 SLC16A10Q8TF71 515 aa20.94■□□□□ 0.94
CMTM3-212ENST00000566121 AKT1S1Q96B36 256 aa20.94■□□□□ 0.94
CMTM3-212ENST00000566121 POLKQ9UBT6 870 aa20.94■□□□□ 0.94
CMTM3-212ENST00000566121 EMILIN1Q9Y6C2 1016 aa20.94■□□□□ 0.94
CMTM3-212ENST00000566121 ANKRD26Q9UPS8 1709 aa20.94■□□□□ 0.94
CMTM3-212ENST00000566121 RGPD2P0DJD1 1756 aa20.93■□□□□ 0.94
CMTM3-212ENST00000566121 NKX1-1Q15270 411 aaPredicted RBP20.93■□□□□ 0.94
CMTM3-212ENST00000566121 SGIP1Q9BQI5 828 aa20.93■□□□□ 0.94
CMTM3-212ENST00000566121 PCDH11XQ9BZA7 1347 aa20.93■□□□□ 0.94
CMTM3-212ENST00000566121 PCDH11YQ9BZA8 1340 aa20.93■□□□□ 0.94
CMTM3-212ENST00000566121 SHANK3Q9BYB0 1731 aa20.92■□□□□ 0.94
CMTM3-212ENST00000566121 PPP1R1BQ9UD71 204 aaPredicted RBP20.92■□□□□ 0.94
CMTM3-212ENST00000566121 PDGFDQ9GZP0 370 aaPredicted RBP20.91■□□□□ 0.94
CMTM3-212ENST00000566121 CYP27B1O15528 508 aa20.89■□□□□ 0.93
CMTM3-212ENST00000566121 USHBP1Q8N6Y0 703 aa20.89■□□□□ 0.93
CMTM3-212ENST00000566121 PANK3Q9H999 370 aa20.89■□□□□ 0.93
CMTM3-212ENST00000566121 EYA1Q99502 592 aa20.88■□□□□ 0.93
CMTM3-212ENST00000566121 MAP3K5Q99683 1374 aa20.87■□□□□ 0.93
CMTM3-212ENST00000566121 ZBTB7AO95365 584 aa20.87■□□□□ 0.93
CMTM3-212ENST00000566121 ZNF827Q17R98 1081 aa20.87■□□□□ 0.93
CMTM3-212ENST00000566121 SPG7Q9UQ90 795 aa20.87■□□□□ 0.93
CMTM3-212ENST00000566121 MAP2P11137 1827 aaKnown RBP20.87■□□□□ 0.93
CMTM3-212ENST00000566121 LY75O60449 1722 aa20.87■□□□□ 0.93
CMTM3-212ENST00000566121 QSER1Q2KHR3 1735 aa20.87■□□□□ 0.93
CMTM3-212ENST00000566121 SYTL4Q96C24 671 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-212ENST00000566121 DCAF8L1A6NGE4 600 aa20.84■□□□□ 0.93
CMTM3-212ENST00000566121 SMARCC1Q92922 1105 aaPredicted RBP20.84■□□□□ 0.93
CMTM3-212ENST00000566121 PKD1L3Q7Z443 1732 aa20.84■□□□□ 0.93
CMTM3-212ENST00000566121 DOT1LQ8TEK3 1739 aa20.84■□□□□ 0.93
CMTM3-212ENST00000566121 ATF5Q9Y2D1 282 aaPredicted RBP20.83■□□□□ 0.93
CMTM3-212ENST00000566121 UTRNP46939 3433 aa20.83■□□□□ 0.92
CMTM3-212ENST00000566121 PPM1GO15355 546 aaPredicted RBP20.82■□□□□ 0.92
CMTM3-212ENST00000566121 EIF4A2Q14240 407 aaKnown RBP20.82■□□□□ 0.92
CMTM3-212ENST00000566121 CCNL1Q9UK58 526 aaPredicted RBP20.82■□□□□ 0.92
CMTM3-212ENST00000566121 IGSF1Q8N6C5 1336 aa20.81■□□□□ 0.92
CMTM3-212ENST00000566121 COL24A1Q17RW2 1714 aa20.81■□□□□ 0.92
CMTM3-212ENST00000566121 PNPLA7Q6ZV29 1317 aa20.8■□□□□ 0.92
CMTM3-212ENST00000566121 IFNL2Q8IZJ0 200 aa20.8■□□□□ 0.92
CMTM3-212ENST00000566121 FLAD1Q8NFF5 587 aa20.8■□□□□ 0.92
CMTM3-212ENST00000566121 ARXQ96QS3 562 aa20.8■□□□□ 0.92
CMTM3-212ENST00000566121 SYT17Q9BSW7 474 aa20.8■□□□□ 0.92
CMTM3-212ENST00000566121 TFCP2L1Q9NZI6 479 aa20.8■□□□□ 0.92
CMTM3-212ENST00000566121 KNSTRNQ9Y448 316 aa20.8■□□□□ 0.92
CMTM3-212ENST00000566121 POLR3GLQ9BT43 218 aa20.79■□□□□ 0.92
CMTM3-212ENST00000566121 AMER1Q5JTC6 1135 aaPredicted RBP20.78■□□□□ 0.92
CMTM3-212ENST00000566121 PHKG2P15735 406 aa20.77■□□□□ 0.92
CMTM3-212ENST00000566121 MORC1Q86VD1 984 aa20.77■□□□□ 0.92
CMTM3-212ENST00000566121 PIGBQ92521 554 aa20.77■□□□□ 0.92
CMTM3-212ENST00000566121 PALLDQ8WX93 1383 aa20.76■□□□□ 0.91
CMTM3-212ENST00000566121 PER1O15534 1290 aaPredicted RBP20.76■□□□□ 0.91
CMTM3-212ENST00000566121 MPRIPQ6WCQ1 1025 aa20.76■□□□□ 0.91
CMTM3-212ENST00000566121 FHDC1Q9C0D6 1143 aaPredicted RBP20.76■□□□□ 0.91
CMTM3-212ENST00000566121 HSP90AB1P08238 724 aaKnown RBP20.75■□□□□ 0.91
CMTM3-212ENST00000566121 POLD1P28340 1107 aa20.75■□□□□ 0.91
CMTM3-212ENST00000566121 AMOTQ4VCS5 1084 aa20.75■□□□□ 0.91
CMTM3-212ENST00000566121 KIF7Q2M1P5 1343 aa20.75■□□□□ 0.91
CMTM3-212ENST00000566121 ERVV-2B6SEH9 535 aa20.74■□□□□ 0.91
CMTM3-212ENST00000566121 TNNT2P45379 298 aaPredicted RBP20.73■□□□□ 0.91
CMTM3-212ENST00000566121 KDRP35968 1356 aa20.72■□□□□ 0.91
CMTM3-212ENST00000566121 NPC1L1Q9UHC9 1359 aa20.72■□□□□ 0.91
CMTM3-212ENST00000566121 KCNQ4P56696 695 aa20.72■□□□□ 0.91
CMTM3-212ENST00000566121 PLEKHO1Q53GL0 409 aaPredicted RBP20.72■□□□□ 0.91
CMTM3-212ENST00000566121 ITGB4P16144 1822 aa20.71■□□□□ 0.91
CMTM3-212ENST00000566121 TOGARAM1Q9Y4F4 1720 aa20.71■□□□□ 0.91
CMTM3-212ENST00000566121 COL23A1Q86Y22 540 aaPredicted RBP20.71■□□□□ 0.91
CMTM3-212ENST00000566121 DCAF5Q96JK2 942 aa20.71■□□□□ 0.91
CMTM3-212ENST00000566121 TMOD3Q9NYL9 352 aa20.71■□□□□ 0.91
CMTM3-212ENST00000566121 LOC102724428A0A0B4J2F2 783 aa20.69■□□□□ 0.9
CMTM3-212ENST00000566121 IL13P35225 146 aa20.69■□□□□ 0.9
CMTM3-212ENST00000566121 SIK1P57059 783 aa20.69■□□□□ 0.9
CMTM3-212ENST00000566121 YY1P25490 414 aa20.68■□□□□ 0.9
CMTM3-212ENST00000566121 TUBGCP6Q96RT7 1819 aa20.68■□□□□ 0.9
CMTM3-212ENST00000566121 TAF1LQ8IZX4 1826 aa20.67■□□□□ 0.9
CMTM3-212ENST00000566121 SSFA2P28290 1259 aa20.67■□□□□ 0.9
CMTM3-212ENST00000566121 C5P01031 1676 aa20.67■□□□□ 0.9
CMTM3-212ENST00000566121 GOLGB1Q14789 3259 aaKnown RBP20.66■□□□□ 0.9
CMTM3-212ENST00000566121 ATG3Q9NT62 314 aa20.66■□□□□ 0.9
CMTM3-212ENST00000566121 ASAP1Q9ULH1 1129 aa20.65■□□□□ 0.9
CMTM3-212ENST00000566121 ZNF831Q5JPB2 1677 aa20.64■□□□□ 0.9
CMTM3-212ENST00000566121 RC3H1Q5TC82 1133 aaKnown RBP20.64■□□□□ 0.89
CMTM3-212ENST00000566121 AK7Q96M32 723 aa20.63■□□□□ 0.89
CMTM3-212ENST00000566121 CD2APQ9Y5K6 639 aa20.63■□□□□ 0.89
CMTM3-212ENST00000566121 C4BP0C0L5 1744 aa20.63■□□□□ 0.89
CMTM3-212ENST00000566121 SULT6B1Q6IMI4 303 aa20.62■□□□□ 0.89
CMTM3-212ENST00000566121 MTHFSP49914 203 aa20.61■□□□□ 0.89
CMTM3-212ENST00000566121 ZNF530Q6P9A1 599 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms