RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 ZCRB1Q8TBF4 217 aaKnown RBP27.09■■□□□ 1.93
CMTM3-211ENST00000565922 NCAPD2Q15021 1401 aa27.08■■□□□ 1.93
CMTM3-211ENST00000565922 PLSCR1O15162 318 aa27.08■■□□□ 1.93
CMTM3-211ENST00000565922 PKD1L3Q7Z443 1732 aa27.07■■□□□ 1.92
CMTM3-211ENST00000565922 BTAF1O14981 1849 aa27.07■■□□□ 1.92
CMTM3-211ENST00000565922 DDX54Q8TDD1 881 aaKnown RBP27.07■■□□□ 1.92
CMTM3-211ENST00000565922 DOT1LQ8TEK3 1739 aa27.07■■□□□ 1.92
CMTM3-211ENST00000565922 PER1O15534 1290 aaPredicted RBP27.05■■□□□ 1.92
CMTM3-211ENST00000565922 NPC1L1Q9UHC9 1359 aa27.04■■□□□ 1.92
CMTM3-211ENST00000565922 PCDH11XQ9BZA7 1347 aa27.02■■□□□ 1.92
CMTM3-211ENST00000565922 PCDH11YQ9BZA8 1340 aa27.02■■□□□ 1.92
CMTM3-211ENST00000565922 ACSBG1Q96GR2 724 aa27.02■■□□□ 1.92
CMTM3-211ENST00000565922 PLEKHG2Q9H7P9 1386 aa27.01■■□□□ 1.91
CMTM3-211ENST00000565922 EIF4A2Q14240 407 aaKnown RBP27.01■■□□□ 1.91
CMTM3-211ENST00000565922 NBPF14Q5TI25 921 aa27.01■■□□□ 1.91
CMTM3-211ENST00000565922 EYA1Q99502 592 aa27.01■■□□□ 1.91
CMTM3-211ENST00000565922 KCNQ2O43526 872 aa26.99■■□□□ 1.91
CMTM3-211ENST00000565922 PTF1AQ7RTS3 328 aa26.99■■□□□ 1.91
CMTM3-211ENST00000565922 CC2D1BQ5T0F9 858 aaKnown RBP26.98■■□□□ 1.91
CMTM3-211ENST00000565922 SPG7Q9UQ90 795 aa26.96■■□□□ 1.91
CMTM3-211ENST00000565922 IGSF1Q8N6C5 1336 aa26.95■■□□□ 1.91
CMTM3-211ENST00000565922 PSDA5PKW4 1024 aaPredicted RBP26.95■■□□□ 1.9
CMTM3-211ENST00000565922 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.95■■□□□ 1.9
CMTM3-211ENST00000565922 R3HDM1Q15032 1099 aaKnown RBP26.94■■□□□ 1.9
CMTM3-211ENST00000565922 LRP5O75197 1615 aa26.94■■□□□ 1.9
CMTM3-211ENST00000565922 SYTL4Q96C24 671 aaPredicted RBP26.93■■□□□ 1.9
CMTM3-211ENST00000565922 TXNRD1Q16881 649 aa26.92■■□□□ 1.9
CMTM3-211ENST00000565922 ITGB4P16144 1822 aa26.92■■□□□ 1.9
CMTM3-211ENST00000565922 LY75O60449 1722 aa26.9■■□□□ 1.9
CMTM3-211ENST00000565922 MTHFSP49914 203 aa26.9■■□□□ 1.9
CMTM3-211ENST00000565922 PRIM1P49642 420 aaKnown RBP26.89■■□□□ 1.9
CMTM3-211ENST00000565922 TOGARAM1Q9Y4F4 1720 aa26.89■■□□□ 1.9
CMTM3-211ENST00000565922 CYP27B1O15528 508 aa26.88■■□□□ 1.89
CMTM3-211ENST00000565922 PROM2Q8N271 834 aa26.88■■□□□ 1.89
CMTM3-211ENST00000565922 IL13P35225 146 aa26.85■■□□□ 1.89
CMTM3-211ENST00000565922 IFNL2Q8IZJ0 200 aa26.85■■□□□ 1.89
CMTM3-211ENST00000565922 KDRP35968 1356 aa26.84■■□□□ 1.89
CMTM3-211ENST00000565922 PAPPAQ13219 1627 aa26.84■■□□□ 1.89
CMTM3-211ENST00000565922 CNGB1Q14028 1251 aaPredicted RBP26.84■■□□□ 1.89
CMTM3-211ENST00000565922 NKX1-1Q15270 411 aaPredicted RBP26.84■■□□□ 1.89
CMTM3-211ENST00000565922 AMOTQ4VCS5 1084 aa26.83■■□□□ 1.89
CMTM3-211ENST00000565922 SLC27A3Q5K4L6 730 aa26.83■■□□□ 1.89
CMTM3-211ENST00000565922 STK32BQ9NY57 414 aa26.83■■□□□ 1.89
CMTM3-211ENST00000565922 PLEKHO1Q53GL0 409 aaPredicted RBP26.82■■□□□ 1.88
CMTM3-211ENST00000565922 DIAPH1O60610 1272 aaKnown RBP26.81■■□□□ 1.88
CMTM3-211ENST00000565922 SULT6B1Q6IMI4 303 aa26.81■■□□□ 1.88
CMTM3-211ENST00000565922 CASZ1Q86V15 1759 aa26.8■■□□□ 1.88
CMTM3-211ENST00000565922 HSP90AB1P08238 724 aaKnown RBP26.8■■□□□ 1.88
CMTM3-211ENST00000565922 PHKG2P15735 406 aa26.8■■□□□ 1.88
CMTM3-211ENST00000565922 ZEB1P37275 1124 aaPredicted RBP26.8■■□□□ 1.88
CMTM3-211ENST00000565922 ANO8Q9HCE9 1232 aaPredicted RBP26.8■■□□□ 1.88
CMTM3-211ENST00000565922 HMGB2P26583 209 aaKnown RBP26.79■■□□□ 1.88
CMTM3-211ENST00000565922 QSER1Q2KHR3 1735 aa26.79■■□□□ 1.88
CMTM3-211ENST00000565922 AEBP1Q8IUX7 1158 aa26.78■■□□□ 1.88
CMTM3-211ENST00000565922 COL3A1P02461 1466 aaPredicted RBP26.77■■□□□ 1.88
CMTM3-211ENST00000565922 SLC15A2Q16348 729 aa26.77■■□□□ 1.88
CMTM3-211ENST00000565922 MPRIPQ6WCQ1 1025 aa26.77■■□□□ 1.88
CMTM3-211ENST00000565922 CFAP53Q96M91 514 aa26.76■■□□□ 1.87
CMTM3-211ENST00000565922 SMARCC1Q92922 1105 aaPredicted RBP26.75■■□□□ 1.87
CMTM3-211ENST00000565922 C5P01031 1676 aa26.75■■□□□ 1.87
CMTM3-211ENST00000565922 VIRMAQ69YN4 1812 aaKnown RBP26.74■■□□□ 1.87
CMTM3-211ENST00000565922 TAF1LQ8IZX4 1826 aa26.74■■□□□ 1.87
CMTM3-211ENST00000565922 C1orf141Q5JVX7 400 aa26.74■■□□□ 1.87
CMTM3-211ENST00000565922 ZNF530Q6P9A1 599 aaPredicted RBP26.74■■□□□ 1.87
CMTM3-211ENST00000565922 DCAF5Q96JK2 942 aa26.73■■□□□ 1.87
CMTM3-211ENST00000565922 LRRC4BQ9NT99 713 aa26.73■■□□□ 1.87
CMTM3-211ENST00000565922 TMOD3Q9NYL9 352 aa26.73■■□□□ 1.87
CMTM3-211ENST00000565922 CCNL1Q9UK58 526 aaPredicted RBP26.73■■□□□ 1.87
CMTM3-211ENST00000565922 SCN11AQ9UI33 1791 aa26.73■■□□□ 1.87
CMTM3-211ENST00000565922 PALLDQ8WX93 1383 aa26.72■■□□□ 1.87
CMTM3-211ENST00000565922 TUBGCP6Q96RT7 1819 aa26.7■■□□□ 1.87
CMTM3-211ENST00000565922 ERVV-2B6SEH9 535 aa26.69■■□□□ 1.86
CMTM3-211ENST00000565922 HMOX1P09601 288 aa26.69■■□□□ 1.86
CMTM3-211ENST00000565922 PPP2R1AP30153 589 aa26.69■■□□□ 1.86
CMTM3-211ENST00000565922 PIGBQ92521 554 aa26.69■■□□□ 1.86
CMTM3-211ENST00000565922 SPON1Q9HCB6 807 aa26.69■■□□□ 1.86
CMTM3-211ENST00000565922 SRCAPQ6ZRS2 3230 aa26.69■■□□□ 1.86
CMTM3-211ENST00000565922 U2SURPO15042 1029 aaKnown RBP26.68■■□□□ 1.86
CMTM3-211ENST00000565922 NUDCQ9Y266 331 aa26.67■■□□□ 1.86
CMTM3-211ENST00000565922 KDM6AO15550 1401 aaPredicted RBP26.65■■□□□ 1.86
CMTM3-211ENST00000565922 ZNF827Q17R98 1081 aa26.65■■□□□ 1.86
CMTM3-211ENST00000565922 AKAP4Q5JQC9 854 aa26.65■■□□□ 1.86
CMTM3-211ENST00000565922 AKT1S1Q96B36 256 aa26.65■■□□□ 1.86
CMTM3-211ENST00000565922 ZNF831Q5JPB2 1677 aa26.63■■□□□ 1.85
CMTM3-211ENST00000565922 CABP4P57796 275 aa26.63■■□□□ 1.85
CMTM3-211ENST00000565922 C4BP0C0L5 1744 aa26.62■■□□□ 1.85
CMTM3-211ENST00000565922 KCNQ4P56696 695 aa26.62■■□□□ 1.85
CMTM3-211ENST00000565922 TFCP2L1Q9NZI6 479 aa26.62■■□□□ 1.85
CMTM3-211ENST00000565922 MTFR1LQ9H019 292 aa26.61■■□□□ 1.85
CMTM3-211ENST00000565922 ADAMTS7Q9UKP4 1686 aa26.6■■□□□ 1.85
CMTM3-211ENST00000565922 DDX10Q13206 875 aaKnown RBP26.59■■□□□ 1.85
CMTM3-211ENST00000565922 PDGFDQ9GZP0 370 aaPredicted RBP26.59■■□□□ 1.85
CMTM3-211ENST00000565922 PPP1R1BQ9UD71 204 aaPredicted RBP26.59■■□□□ 1.85
CMTM3-211ENST00000565922 LOC102724428A0A0B4J2F2 783 aa26.58■■□□□ 1.85
CMTM3-211ENST00000565922 ZBTB7AO95365 584 aa26.58■■□□□ 1.85
CMTM3-211ENST00000565922 SIK1P57059 783 aa26.58■■□□□ 1.85
CMTM3-211ENST00000565922 SLC16A10Q8TF71 515 aa26.58■■□□□ 1.85
CMTM3-211ENST00000565922 ASAP1Q9ULH1 1129 aa26.58■■□□□ 1.85
CMTM3-211ENST00000565922 RALBP1Q15311 655 aa26.57■■□□□ 1.84
CMTM3-211ENST00000565922 MTHFSDQ2M296 383 aaKnown RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms