RNA–Protein interactions for RNA: ENST00000565684.5

KIFC3-223, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-223	ENST00000565684	CASZ1	Q86V15	1759 aa		31.28	■■■□□ 2.6
KIFC3-223	ENST00000565684	PANK3	Q9H999	370 aa		31.27	■■■□□ 2.6
KIFC3-223	ENST00000565684	ANO8	Q9HCE9	1232 aa	Predicted RBP	31.27	■■■□□ 2.6
KIFC3-223	ENST00000565684	NCAPD2	Q15021	1401 aa		31.26	■■■□□ 2.6
KIFC3-223	ENST00000565684	DDX54	Q8TDD1	881 aa	Known RBP	31.26	■■■□□ 2.59
KIFC3-223	ENST00000565684	PAPPA	Q13219	1627 aa		31.26	■■■□□ 2.59
KIFC3-223	ENST00000565684	PKD1L3	Q7Z443	1732 aa		31.25	■■■□□ 2.59
KIFC3-223	ENST00000565684	TXNRD1	Q16881	649 aa		31.23	■■■□□ 2.59
KIFC3-223	ENST00000565684	ZCRB1	Q8TBF4	217 aa	Known RBP	31.22	■■■□□ 2.59
KIFC3-223	ENST00000565684	POLK	Q9UBT6	870 aa		31.22	■■■□□ 2.59
KIFC3-223	ENST00000565684	WASHC2A	Q641Q2	1341 aa		31.22	■■■□□ 2.59
KIFC3-223	ENST00000565684	PPM1G	O15355	546 aa	Predicted RBP	31.2	■■■□□ 2.59
KIFC3-223	ENST00000565684	KIF7	Q2M1P5	1343 aa		31.19	■■■□□ 2.58
KIFC3-223	ENST00000565684	NSD2	O96028	1365 aa		31.18	■■■□□ 2.58
KIFC3-223	ENST00000565684	LY75	O60449	1722 aa		31.18	■■■□□ 2.58
KIFC3-223	ENST00000565684	RAPGEF4	Q8WZA2	1011 aa		31.18	■■■□□ 2.58
KIFC3-223	ENST00000565684	TOGARAM1	Q9Y4F4	1720 aa		31.17	■■■□□ 2.58
KIFC3-223	ENST00000565684	TNNT2	P45379	298 aa	Predicted RBP	31.16	■■■□□ 2.58
KIFC3-223	ENST00000565684	TAT	P17735	454 aa	Predicted RBP	31.15	■■■□□ 2.58
KIFC3-223	ENST00000565684	ITGB4	P16144	1822 aa		31.11	■■■□□ 2.57
KIFC3-223	ENST00000565684	PRIM1	P49642	420 aa	Known RBP	31.11	■■■□□ 2.57
KIFC3-223	ENST00000565684	EYA1	Q99502	592 aa		31.11	■■■□□ 2.57
KIFC3-223	ENST00000565684	PDGFD	Q9GZP0	370 aa	Predicted RBP	31.11	■■■□□ 2.57
KIFC3-223	ENST00000565684	PCDH11X	Q9BZA7	1347 aa		31.09	■■■□□ 2.57
KIFC3-223	ENST00000565684	PCDH11Y	Q9BZA8	1340 aa		31.09	■■■□□ 2.57
KIFC3-223	ENST00000565684	LRRC4B	Q9NT99	713 aa		31.09	■■■□□ 2.57
KIFC3-223	ENST00000565684	TUBGCP6	Q96RT7	1819 aa		31.08	■■■□□ 2.57
KIFC3-223	ENST00000565684	QSER1	Q2KHR3	1735 aa		31.08	■■■□□ 2.57
KIFC3-223	ENST00000565684	EIF4A2	Q14240	407 aa	Known RBP	31.08	■■■□□ 2.57
KIFC3-223	ENST00000565684	SLC15A2	Q16348	729 aa		31.08	■■■□□ 2.57
KIFC3-223	ENST00000565684	SYTL4	Q96C24	671 aa	Predicted RBP	31.08	■■■□□ 2.57
KIFC3-223	ENST00000565684	CYP27B1	O15528	508 aa		31.07	■■■□□ 2.56
KIFC3-223	ENST00000565684	STK32B	Q9NY57	414 aa		31.07	■■■□□ 2.56
KIFC3-223	ENST00000565684	AMER1	Q5JTC6	1135 aa	Predicted RBP	31.05	■■■□□ 2.56
KIFC3-223	ENST00000565684	KNSTRN	Q9Y448	316 aa		31.05	■■■□□ 2.56
KIFC3-223	ENST00000565684	MORC1	Q86VD1	984 aa		31.03	■■■□□ 2.56
KIFC3-223	ENST00000565684	SPON1	Q9HCB6	807 aa		31.02	■■■□□ 2.56
KIFC3-223	ENST00000565684	ZNF827	Q17R98	1081 aa		31.01	■■■□□ 2.55
KIFC3-223	ENST00000565684	IGSF1	Q8N6C5	1336 aa		31	■■■□□ 2.55
KIFC3-223	ENST00000565684	SLC27A3	Q5K4L6	730 aa		31	■■■□□ 2.55
KIFC3-223	ENST00000565684	PER1	O15534	1290 aa	Predicted RBP	30.99	■■■□□ 2.55
KIFC3-223	ENST00000565684	TAF1L	Q8IZX4	1826 aa		30.98	■■■□□ 2.55
KIFC3-223	ENST00000565684	C5	P01031	1676 aa		30.97	■■■□□ 2.55
KIFC3-223	ENST00000565684	KCNQ4	P56696	695 aa		30.97	■■■□□ 2.55
KIFC3-223	ENST00000565684	ZBTB7A	O95365	584 aa		30.96	■■■□□ 2.55
KIFC3-223	ENST00000565684	AKT1S1	Q96B36	256 aa		30.96	■■■□□ 2.55
KIFC3-223	ENST00000565684	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	30.96	■■■□□ 2.55
KIFC3-223	ENST00000565684	SPG7	Q9UQ90	795 aa		30.96	■■■□□ 2.55
KIFC3-223	ENST00000565684	PLEKHG2	Q9H7P9	1386 aa		30.95	■■■□□ 2.55
KIFC3-223	ENST00000565684	NKX1-1	Q15270	411 aa	Predicted RBP	30.95	■■■□□ 2.55
KIFC3-223	ENST00000565684	COL24A1	Q17RW2	1714 aa		30.93	■■■□□ 2.54
KIFC3-223	ENST00000565684	PTGER2	P43116	358 aa		30.91	■■■□□ 2.54
KIFC3-223	ENST00000565684	MPRIP	Q6WCQ1	1025 aa		30.9	■■■□□ 2.54
KIFC3-223	ENST00000565684	PHKG2	P15735	406 aa		30.89	■■■□□ 2.54
KIFC3-223	ENST00000565684	CCNL1	Q9UK58	526 aa	Predicted RBP	30.89	■■■□□ 2.54
KIFC3-223	ENST00000565684	ATF5	Q9Y2D1	282 aa	Predicted RBP	30.89	■■■□□ 2.54
KIFC3-223	ENST00000565684	PPP1R1B	Q9UD71	204 aa	Predicted RBP	30.88	■■■□□ 2.53
KIFC3-223	ENST00000565684	PALLD	Q8WX93	1383 aa		30.88	■■■□□ 2.53
KIFC3-223	ENST00000565684	MTFR1L	Q9H019	292 aa		30.87	■■■□□ 2.53
KIFC3-223	ENST00000565684	IL13	P35225	146 aa		30.86	■■■□□ 2.53
KIFC3-223	ENST00000565684	AEBP1	Q8IUX7	1158 aa		30.86	■■■□□ 2.53
KIFC3-223	ENST00000565684	IFNL2	Q8IZJ0	200 aa		30.86	■■■□□ 2.53
KIFC3-223	ENST00000565684	SGIP1	Q9BQI5	828 aa		30.86	■■■□□ 2.53
KIFC3-223	ENST00000565684	PNPLA7	Q6ZV29	1317 aa		30.86	■■■□□ 2.53
KIFC3-223	ENST00000565684	KDR	P35968	1356 aa		30.85	■■■□□ 2.53
KIFC3-223	ENST00000565684	NPC1L1	Q9UHC9	1359 aa		30.85	■■■□□ 2.53
KIFC3-223	ENST00000565684	CC2D1B	Q5T0F9	858 aa	Known RBP	30.85	■■■□□ 2.53
KIFC3-223	ENST00000565684	PIGB	Q92521	554 aa		30.85	■■■□□ 2.53
KIFC3-223	ENST00000565684	C4B	P0C0L5	1744 aa		30.83	■■■□□ 2.53
KIFC3-223	ENST00000565684	MTHFS	P49914	203 aa		30.82	■■■□□ 2.52
KIFC3-223	ENST00000565684	KDM6A	O15550	1401 aa	Predicted RBP	30.8	■■■□□ 2.52
KIFC3-223	ENST00000565684	SULT6B1	Q6IMI4	303 aa		30.79	■■■□□ 2.52
KIFC3-223	ENST00000565684	TFCP2L1	Q9NZI6	479 aa		30.79	■■■□□ 2.52
KIFC3-223	ENST00000565684	UBR3	Q6ZT12	1888 aa		30.78	■■■□□ 2.52
KIFC3-223	ENST00000565684	COL3A1	P02461	1466 aa	Predicted RBP	30.78	■■■□□ 2.52
KIFC3-223	ENST00000565684	VIRMA	Q69YN4	1812 aa	Known RBP	30.77	■■■□□ 2.52
KIFC3-223	ENST00000565684	PLEKHO1	Q53GL0	409 aa	Predicted RBP	30.77	■■■□□ 2.52
KIFC3-223	ENST00000565684	SMARCC1	Q92922	1105 aa	Predicted RBP	30.77	■■■□□ 2.52
KIFC3-223	ENST00000565684	TMOD3	Q9NYL9	352 aa		30.77	■■■□□ 2.52
KIFC3-223	ENST00000565684	SCN11A	Q9UI33	1791 aa		30.77	■■■□□ 2.52
KIFC3-223	ENST00000565684	ZNF831	Q5JPB2	1677 aa		30.74	■■■□□ 2.51
KIFC3-223	ENST00000565684	AMOT	Q4VCS5	1084 aa		30.74	■■■□□ 2.51
KIFC3-223	ENST00000565684	ZNF530	Q6P9A1	599 aa	Predicted RBP	30.74	■■■□□ 2.51
KIFC3-223	ENST00000565684	SLC16A10	Q8TF71	515 aa		30.74	■■■□□ 2.51
KIFC3-223	ENST00000565684	ASAP1	Q9ULH1	1129 aa		30.74	■■■□□ 2.51
KIFC3-223	ENST00000565684	CNGB1	Q14028	1251 aa	Predicted RBP	30.72	■■■□□ 2.51
KIFC3-223	ENST00000565684	DCAF5	Q96JK2	942 aa		30.72	■■■□□ 2.51
KIFC3-223	ENST00000565684	ATG3	Q9NT62	314 aa		30.71	■■■□□ 2.51
KIFC3-223	ENST00000565684	COL5A3	P25940	1745 aa	Predicted RBP	30.7	■■■□□ 2.51
KIFC3-223	ENST00000565684	HSP90AB1	P08238	724 aa	Known RBP	30.7	■■■□□ 2.51
KIFC3-223	ENST00000565684	COL23A1	Q86Y22	540 aa	Predicted RBP	30.7	■■■□□ 2.51
KIFC3-223	ENST00000565684	FHDC1	Q9C0D6	1143 aa	Predicted RBP	30.7	■■■□□ 2.51
KIFC3-223	ENST00000565684	LOC102724428	A0A0B4J2F2	783 aa		30.69	■■■□□ 2.5
KIFC3-223	ENST00000565684	ERVV-2	B6SEH9	535 aa		30.69	■■■□□ 2.5
KIFC3-223	ENST00000565684	SIK1	P57059	783 aa		30.69	■■■□□ 2.5
KIFC3-223	ENST00000565684	ARX	Q96QS3	562 aa		30.69	■■■□□ 2.5
KIFC3-223	ENST00000565684	DIAPH1	O60610	1272 aa	Known RBP	30.67	■■■□□ 2.5
KIFC3-223	ENST00000565684	AMIGO3	Q86WK7	504 aa		30.67	■■■□□ 2.5
KIFC3-223	ENST00000565684	ADAMTS7	Q9UKP4	1686 aa		30.67	■■■□□ 2.5
KIFC3-223	ENST00000565684	HMOX1	P09601	288 aa		30.66	■■■□□ 2.5

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms