RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 EZH2Q15910 746 aaKnown RBP25.41■■□□□ 1.66
CMTM3-210ENST00000565666 NHSQ6T4R5 1651 aa25.4■■□□□ 1.66
CMTM3-210ENST00000565666 ACSBG1Q96GR2 724 aa25.4■■□□□ 1.66
CMTM3-210ENST00000565666 NCAPD2Q15021 1401 aa25.39■■□□□ 1.66
CMTM3-210ENST00000565666 CAMKK2Q96RR4 588 aa25.39■■□□□ 1.66
CMTM3-210ENST00000565666 PARD3Q8TEW0 1356 aa25.39■■□□□ 1.65
CMTM3-210ENST00000565666 PTF1AQ7RTS3 328 aa25.38■■□□□ 1.65
CMTM3-210ENST00000565666 RREB1Q92766 1687 aa25.36■■□□□ 1.65
CMTM3-210ENST00000565666 MTHFSP49914 203 aa25.36■■□□□ 1.65
CMTM3-210ENST00000565666 RGPD3A6NKT7 1758 aaPredicted RBP25.36■■□□□ 1.65
CMTM3-210ENST00000565666 RGPD4Q7Z3J3 1758 aa25.36■■□□□ 1.65
CMTM3-210ENST00000565666 PKD1L3Q7Z443 1732 aa25.35■■□□□ 1.65
CMTM3-210ENST00000565666 KCNQ2O43526 872 aa25.35■■□□□ 1.65
CMTM3-210ENST00000565666 KAT6BQ8WYB5 2073 aa25.35■■□□□ 1.65
CMTM3-210ENST00000565666 PCDH11XQ9BZA7 1347 aa25.35■■□□□ 1.65
CMTM3-210ENST00000565666 PCDH11YQ9BZA8 1340 aa25.35■■□□□ 1.65
CMTM3-210ENST00000565666 DOT1LQ8TEK3 1739 aa25.34■■□□□ 1.65
CMTM3-210ENST00000565666 IGSF1Q8N6C5 1336 aa25.34■■□□□ 1.65
CMTM3-210ENST00000565666 PLSCR1O15162 318 aa25.32■■□□□ 1.64
CMTM3-210ENST00000565666 SPG7Q9UQ90 795 aa25.32■■□□□ 1.64
CMTM3-210ENST00000565666 NUP188Q5SRE5 1749 aa25.32■■□□□ 1.64
CMTM3-210ENST00000565666 BTAF1O14981 1849 aa25.31■■□□□ 1.64
CMTM3-210ENST00000565666 SYTL4Q96C24 671 aaPredicted RBP25.31■■□□□ 1.64
CMTM3-210ENST00000565666 IL13P35225 146 aa25.28■■□□□ 1.64
CMTM3-210ENST00000565666 PSDA5PKW4 1024 aaPredicted RBP25.26■■□□□ 1.63
CMTM3-210ENST00000565666 CYP27B1O15528 508 aa25.26■■□□□ 1.63
CMTM3-210ENST00000565666 PRIM1P49642 420 aaKnown RBP25.26■■□□□ 1.63
CMTM3-210ENST00000565666 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.26■■□□□ 1.63
CMTM3-210ENST00000565666 DIAPH1O60610 1272 aaKnown RBP25.25■■□□□ 1.63
CMTM3-210ENST00000565666 NBPF14Q5TI25 921 aa25.25■■□□□ 1.63
CMTM3-210ENST00000565666 PLEKHG2Q9H7P9 1386 aa25.24■■□□□ 1.63
CMTM3-210ENST00000565666 SULT6B1Q6IMI4 303 aa25.24■■□□□ 1.63
CMTM3-210ENST00000565666 AEBP1Q8IUX7 1158 aa25.24■■□□□ 1.63
CMTM3-210ENST00000565666 R3HDM1Q15032 1099 aaKnown RBP25.23■■□□□ 1.63
CMTM3-210ENST00000565666 TXNRD1Q16881 649 aa25.23■■□□□ 1.63
CMTM3-210ENST00000565666 PLEKHO1Q53GL0 409 aaPredicted RBP25.22■■□□□ 1.63
CMTM3-210ENST00000565666 DDX10Q13206 875 aaKnown RBP25.21■■□□□ 1.63
CMTM3-210ENST00000565666 IFNL2Q8IZJ0 200 aa25.21■■□□□ 1.63
CMTM3-210ENST00000565666 CFAP53Q96M91 514 aa25.21■■□□□ 1.63
CMTM3-210ENST00000565666 TOGARAM1Q9Y4F4 1720 aa25.2■■□□□ 1.63
CMTM3-210ENST00000565666 PROM2Q8N271 834 aa25.2■■□□□ 1.62
CMTM3-210ENST00000565666 COL3A1P02461 1466 aaPredicted RBP25.2■■□□□ 1.62
CMTM3-210ENST00000565666 KDRP35968 1356 aa25.19■■□□□ 1.62
CMTM3-210ENST00000565666 PHKG2P15735 406 aa25.19■■□□□ 1.62
CMTM3-210ENST00000565666 PPP2R1AP30153 589 aa25.19■■□□□ 1.62
CMTM3-210ENST00000565666 AMOTQ4VCS5 1084 aa25.19■■□□□ 1.62
CMTM3-210ENST00000565666 HMOX1P09601 288 aa25.18■■□□□ 1.62
CMTM3-210ENST00000565666 NKX1-1Q15270 411 aaPredicted RBP25.18■■□□□ 1.62
CMTM3-210ENST00000565666 ITGB4P16144 1822 aa25.18■■□□□ 1.62
CMTM3-210ENST00000565666 U2SURPO15042 1029 aaKnown RBP25.17■■□□□ 1.62
CMTM3-210ENST00000565666 ZNF530Q6P9A1 599 aaPredicted RBP25.17■■□□□ 1.62
CMTM3-210ENST00000565666 MPRIPQ6WCQ1 1025 aa25.16■■□□□ 1.62
CMTM3-210ENST00000565666 LY75O60449 1722 aa25.13■■□□□ 1.61
CMTM3-210ENST00000565666 HSP90AB1P08238 724 aaKnown RBP25.13■■□□□ 1.61
CMTM3-210ENST00000565666 C1orf141Q5JVX7 400 aa25.13■■□□□ 1.61
CMTM3-210ENST00000565666 ANO8Q9HCE9 1232 aaPredicted RBP25.12■■□□□ 1.61
CMTM3-210ENST00000565666 STK32BQ9NY57 414 aa25.12■■□□□ 1.61
CMTM3-210ENST00000565666 TMOD3Q9NYL9 352 aa25.11■■□□□ 1.61
CMTM3-210ENST00000565666 NUDCQ9Y266 331 aa25.11■■□□□ 1.61
CMTM3-210ENST00000565666 SLC27A3Q5K4L6 730 aa25.1■■□□□ 1.61
CMTM3-210ENST00000565666 DCAF5Q96JK2 942 aa25.09■■□□□ 1.61
CMTM3-210ENST00000565666 PAPPAQ13219 1627 aa25.08■■□□□ 1.61
CMTM3-210ENST00000565666 PIGBQ92521 554 aa25.08■■□□□ 1.61
CMTM3-210ENST00000565666 LRRC4BQ9NT99 713 aa25.08■■□□□ 1.61
CMTM3-210ENST00000565666 PALLDQ8WX93 1383 aa25.07■■□□□ 1.6
CMTM3-210ENST00000565666 CCNL1Q9UK58 526 aaPredicted RBP25.07■■□□□ 1.6
CMTM3-210ENST00000565666 KCNQ4P56696 695 aa25.06■■□□□ 1.6
CMTM3-210ENST00000565666 RALBP1Q15311 655 aa25.06■■□□□ 1.6
CMTM3-210ENST00000565666 SLC15A2Q16348 729 aa25.06■■□□□ 1.6
CMTM3-210ENST00000565666 SMARCC1Q92922 1105 aaPredicted RBP25.06■■□□□ 1.6
CMTM3-210ENST00000565666 KDM6AO15550 1401 aaPredicted RBP25.05■■□□□ 1.6
CMTM3-210ENST00000565666 ERVV-2B6SEH9 535 aa25.05■■□□□ 1.6
CMTM3-210ENST00000565666 AKAP4Q5JQC9 854 aa25.04■■□□□ 1.6
CMTM3-210ENST00000565666 LRP5O75197 1615 aa25.04■■□□□ 1.6
CMTM3-210ENST00000565666 U2AF1L5P0DN76 240 aaPredicted RBP25.03■■□□□ 1.6
CMTM3-210ENST00000565666 CABP4P57796 275 aa25.03■■□□□ 1.6
CMTM3-210ENST00000565666 U2AF1Q01081 240 aaKnown RBP eCLIP25.03■■□□□ 1.6
CMTM3-210ENST00000565666 SCN11AQ9UI33 1791 aa25.03■■□□□ 1.6
CMTM3-210ENST00000565666 MTHFSDQ2M296 383 aaKnown RBP25.02■■□□□ 1.6
CMTM3-210ENST00000565666 C5P01031 1676 aa25.01■■□□□ 1.59
CMTM3-210ENST00000565666 CASZ1Q86V15 1759 aa25■■□□□ 1.59
CMTM3-210ENST00000565666 PRKAR2BP31323 418 aa25■■□□□ 1.59
CMTM3-210ENST00000565666 ZNF827Q17R98 1081 aa25■■□□□ 1.59
CMTM3-210ENST00000565666 VIRMAQ69YN4 1812 aaKnown RBP25■■□□□ 1.59
CMTM3-210ENST00000565666 RSPH6AQ9H0K4 717 aa24.99■■□□□ 1.59
CMTM3-210ENST00000565666 ASAP1Q9ULH1 1129 aa24.99■■□□□ 1.59
CMTM3-210ENST00000565666 ZNF316A6NFI3 1004 aaPredicted RBP24.98■■□□□ 1.59
CMTM3-210ENST00000565666 HMGB2P26583 209 aaKnown RBP24.98■■□□□ 1.59
CMTM3-210ENST00000565666 GAS2L2Q8NHY3 880 aa24.98■■□□□ 1.59
CMTM3-210ENST00000565666 AKT1S1Q96B36 256 aa24.97■■□□□ 1.59
CMTM3-210ENST00000565666 ATG3Q9NT62 314 aa24.97■■□□□ 1.59
CMTM3-210ENST00000565666 TAF1LQ8IZX4 1826 aa24.97■■□□□ 1.59
CMTM3-210ENST00000565666 MYBBP1AQ9BQG0 1328 aaKnown RBP24.96■■□□□ 1.59
CMTM3-210ENST00000565666 QSER1Q2KHR3 1735 aa24.95■■□□□ 1.59
CMTM3-210ENST00000565666 LOC102724428A0A0B4J2F2 783 aa24.95■■□□□ 1.58
CMTM3-210ENST00000565666 RNMTO43148 476 aaKnown RBP24.95■■□□□ 1.58
CMTM3-210ENST00000565666 FCHSD2O94868 740 aa24.95■■□□□ 1.58
CMTM3-210ENST00000565666 SIK1P57059 783 aa24.95■■□□□ 1.58
CMTM3-210ENST00000565666 NFATC2IPQ8NCF5 419 aa24.95■■□□□ 1.58
CMTM3-210ENST00000565666 PDGFDQ9GZP0 370 aaPredicted RBP24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms