RNA–Protein interactions for RNA: ENST00000565401.1

AC009041.1-201, humanhuman

TSL 4 BASIC

Gene AC009041.1, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.1-201ENST00000565401 FOXN1O15353 648 aa18.93■□□□□ 0.62
AC009041.1-201ENST00000565401 KCPQ6ZWJ8 1503 aa18.92■□□□□ 0.62
AC009041.1-201ENST00000565401 PRIM1P49642 420 aaKnown RBP18.92■□□□□ 0.62
AC009041.1-201ENST00000565401 C9orf131Q5VYM1 1079 aa18.92■□□□□ 0.62
AC009041.1-201ENST00000565401 FLAD1Q8NFF5 587 aa18.92■□□□□ 0.62
AC009041.1-201ENST00000565401 ABHD8Q96I13 439 aa18.92■□□□□ 0.62
AC009041.1-201ENST00000565401 NLRP2Q9NX02 1062 aa18.92■□□□□ 0.62
AC009041.1-201ENST00000565401 BCS1LQ9Y276 419 aa18.92■□□□□ 0.62
AC009041.1-201ENST00000565401 PLEKHG2Q9H7P9 1386 aa18.91■□□□□ 0.62
AC009041.1-201ENST00000565401 C10orf71Q711Q0 1435 aa18.91■□□□□ 0.62
AC009041.1-201ENST00000565401 DDX54Q8TDD1 881 aaKnown RBP18.9■□□□□ 0.62
AC009041.1-201ENST00000565401 LY75O60449 1722 aa18.9■□□□□ 0.62
AC009041.1-201ENST00000565401 KCNH5Q8NCM2 988 aa18.88■□□□□ 0.61
AC009041.1-201ENST00000565401 NSD2O96028 1365 aa18.85■□□□□ 0.61
AC009041.1-201ENST00000565401 ANKRD36BQ8N2N9 1353 aa18.85■□□□□ 0.61
AC009041.1-201ENST00000565401 CTCFP49711 727 aaPredicted RBP18.85■□□□□ 0.61
AC009041.1-201ENST00000565401 KIAA1210Q9ULL0 1709 aa18.85■□□□□ 0.61
AC009041.1-201ENST00000565401 PXDNLA1KZ92 1463 aa18.84■□□□□ 0.61
AC009041.1-201ENST00000565401 RGS19P49795 217 aa18.84■□□□□ 0.61
AC009041.1-201ENST00000565401 SMIM5Q71RC9 77 aa18.84■□□□□ 0.61
AC009041.1-201ENST00000565401 MKRN1Q9UHC7 482 aaKnown RBP18.84■□□□□ 0.61
AC009041.1-201ENST00000565401 ERBB3P21860 1342 aa18.83■□□□□ 0.61
AC009041.1-201ENST00000565401 SRPK2P78362 688 aaKnown RBP18.83■□□□□ 0.6
AC009041.1-201ENST00000565401 MPHOSPH9Q99550 1183 aa18.83■□□□□ 0.6
AC009041.1-201ENST00000565401 A0A0G2JLW4 131 aa18.82■□□□□ 0.6
AC009041.1-201ENST00000565401 FCHSD2O94868 740 aa18.82■□□□□ 0.6
AC009041.1-201ENST00000565401 AIDAQ96BJ3 306 aa18.82■□□□□ 0.6
AC009041.1-201ENST00000565401 USP47Q96K76 1375 aa18.81■□□□□ 0.6
AC009041.1-201ENST00000565401 CCDC85CA6NKD9 419 aa18.81■□□□□ 0.6
AC009041.1-201ENST00000565401 TNRC6CQ9HCJ0 1690 aaKnown RBP18.81■□□□□ 0.6
AC009041.1-201ENST00000565401 PDE4DIPQ5VU43 2346 aa18.8■□□□□ 0.6
AC009041.1-201ENST00000565401 RNF181Q9P0P0 153 aa18.8■□□□□ 0.6
AC009041.1-201ENST00000565401 KDM2AQ9Y2K7 1162 aa18.8■□□□□ 0.6
AC009041.1-201ENST00000565401 USP54Q70EL1 1684 aa18.79■□□□□ 0.6
AC009041.1-201ENST00000565401 PHF14O94880 888 aa18.79■□□□□ 0.6
AC009041.1-201ENST00000565401 LBX1P52954 281 aa18.79■□□□□ 0.6
AC009041.1-201ENST00000565401 TGFB2P61812 414 aa18.79■□□□□ 0.6
AC009041.1-201ENST00000565401 AMIGO3Q86WK7 504 aa18.79■□□□□ 0.6
AC009041.1-201ENST00000565401 CABP2Q9NPB3 220 aa18.79■□□□□ 0.6
AC009041.1-201ENST00000565401 CABP1Q9NZU7 370 aa18.79■□□□□ 0.6
AC009041.1-201ENST00000565401 PKD1L3Q7Z443 1732 aa18.78■□□□□ 0.6
AC009041.1-201ENST00000565401 C5P01031 1676 aa18.78■□□□□ 0.6
AC009041.1-201ENST00000565401 N4BP2Q86UW6 1770 aaPredicted RBP18.78■□□□□ 0.6
AC009041.1-201ENST00000565401 DOT1LQ8TEK3 1739 aa18.77■□□□□ 0.6
AC009041.1-201ENST00000565401 AK7Q96M32 723 aa18.77■□□□□ 0.6
AC009041.1-201ENST00000565401 NFAT5O94916 1531 aa18.76■□□□□ 0.59
AC009041.1-201ENST00000565401 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.76■□□□□ 0.59
AC009041.1-201ENST00000565401 HMGB2P26583 209 aaKnown RBP18.76■□□□□ 0.59
AC009041.1-201ENST00000565401 VEGFAP15692 232 aaPredicted RBP18.75■□□□□ 0.59
AC009041.1-201ENST00000565401 ANKRD24Q8TF21 1146 aa18.75■□□□□ 0.59
AC009041.1-201ENST00000565401 CREBZFQ9NS37 354 aa18.75■□□□□ 0.59
AC009041.1-201ENST00000565401 QRICH2Q9H0J4 1663 aa18.75■□□□□ 0.59
AC009041.1-201ENST00000565401 KIAA1551Q9HCM1 1747 aa18.74■□□□□ 0.59
AC009041.1-201ENST00000565401 DPEP1P16444 411 aa18.74■□□□□ 0.59
AC009041.1-201ENST00000565401 MMP10P09238 476 aa18.73■□□□□ 0.59
AC009041.1-201ENST00000565401 PPARGC1BQ86YN6 1023 aaKnown RBP18.73■□□□□ 0.59
AC009041.1-201ENST00000565401 TTC21BQ7Z4L5 1316 aa18.73■□□□□ 0.59
AC009041.1-201ENST00000565401 DCAF11Q8TEB1 546 aa18.72■□□□□ 0.59
AC009041.1-201ENST00000565401 KIF13BQ9NQT8 1826 aa18.71■□□□□ 0.59
AC009041.1-201ENST00000565401 TOGARAM1Q9Y4F4 1720 aa18.7■□□□□ 0.58
AC009041.1-201ENST00000565401 TNRC18O15417 2968 aaPredicted RBP18.7■□□□□ 0.58
AC009041.1-201ENST00000565401 TAF1LQ8IZX4 1826 aa18.7■□□□□ 0.58
AC009041.1-201ENST00000565401 CNTNAP1P78357 1384 aa18.69■□□□□ 0.58
AC009041.1-201ENST00000565401 WBP1LQ9NX94 342 aa18.69■□□□□ 0.58
AC009041.1-201ENST00000565401 C4BP0C0L5 1744 aa18.69■□□□□ 0.58
AC009041.1-201ENST00000565401 NSD3Q9BZ95 1437 aa18.68■□□□□ 0.58
AC009041.1-201ENST00000565401 SSFA2P28290 1259 aa18.68■□□□□ 0.58
AC009041.1-201ENST00000565401 PALLDQ8WX93 1383 aa18.68■□□□□ 0.58
AC009041.1-201ENST00000565401 HSPA8P11142 646 aaKnown RBP18.67■□□□□ 0.58
AC009041.1-201ENST00000565401 DCAF5Q96JK2 942 aa18.67■□□□□ 0.58
AC009041.1-201ENST00000565401 CFAP44Q96MT7 982 aa18.67■□□□□ 0.58
AC009041.1-201ENST00000565401 UBR3Q6ZT12 1888 aa18.67■□□□□ 0.58
AC009041.1-201ENST00000565401 GLTPD2A6NH11 291 aa18.66■□□□□ 0.58
AC009041.1-201ENST00000565401 ZCRB1Q8TBF4 217 aaKnown RBP18.66■□□□□ 0.58
AC009041.1-201ENST00000565401 ARFGEF1Q9Y6D6 1849 aa18.65■□□□□ 0.58
AC009041.1-201ENST00000565401 KCNA3P22001 575 aa18.65■□□□□ 0.58
AC009041.1-201ENST00000565401 VEGFBP49765 207 aa18.65■□□□□ 0.58
AC009041.1-201ENST00000565401 TTC21AQ8NDW8 1320 aa18.65■□□□□ 0.58
AC009041.1-201ENST00000565401 BRCA1P38398 1863 aaKnown RBP18.65■□□□□ 0.58
AC009041.1-201ENST00000565401 DALRD3Q5D0E6 543 aaKnown RBP18.64■□□□□ 0.57
AC009041.1-201ENST00000565401 PIM2Q9P1W9 311 aa18.64■□□□□ 0.57
AC009041.1-201ENST00000565401 CCDC87Q9NVE4 849 aa18.63■□□□□ 0.57
AC009041.1-201ENST00000565401 ZC3H4Q9UPT8 1303 aaKnown RBP18.63■□□□□ 0.57
AC009041.1-201ENST00000565401 SBF1O95248 1867 aa18.63■□□□□ 0.57
AC009041.1-201ENST00000565401 ZNF692Q9BU19 519 aaPredicted RBP18.62■□□□□ 0.57
AC009041.1-201ENST00000565401 LTV1Q96GA3 475 aaPredicted RBP18.61■□□□□ 0.57
AC009041.1-201ENST00000565401 POTECB2RU33 542 aa18.59■□□□□ 0.57
AC009041.1-201ENST00000565401 CHADLQ6NUI6 762 aa18.59■□□□□ 0.57
AC009041.1-201ENST00000565401 MPRIPQ6WCQ1 1025 aa18.59■□□□□ 0.57
AC009041.1-201ENST00000565401 STAC3Q96MF2 364 aa18.59■□□□□ 0.57
AC009041.1-201ENST00000565401 CENPJQ9HC77 1338 aaPredicted RBP18.58■□□□□ 0.57
AC009041.1-201ENST00000565401 GNPATO15228 680 aa18.58■□□□□ 0.56
AC009041.1-201ENST00000565401 RASSF7Q02833 373 aa18.58■□□□□ 0.56
AC009041.1-201ENST00000565401 LTN1O94822 1766 aa18.58■□□□□ 0.56
AC009041.1-201ENST00000565401 TMF1P82094 1093 aa18.57■□□□□ 0.56
AC009041.1-201ENST00000565401 NLGN1Q8N2Q7 840 aa18.57■□□□□ 0.56
AC009041.1-201ENST00000565401 LINC00116Q8NCU8 138 aa18.57■□□□□ 0.56
AC009041.1-201ENST00000565401 SMARCC1Q92922 1105 aaPredicted RBP18.57■□□□□ 0.56
AC009041.1-201ENST00000565401 LMNB1P20700 586 aa18.55■□□□□ 0.56
AC009041.1-201ENST00000565401 MAP2K1Q02750 393 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms