RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CHL1O00533 1208 aa25.18■■□□□ 1.62
CLN6-205ENST00000564846 ALDH1L2Q3SY69 923 aa25.18■■□□□ 1.62
CLN6-205ENST00000564846 FRAT1Q92837 279 aaPredicted RBP25.18■■□□□ 1.62
CLN6-205ENST00000564846 BCL2L13Q9BXK5 485 aa25.18■■□□□ 1.62
CLN6-205ENST00000564846 SMC4Q9NTJ3 1288 aa25.18■■□□□ 1.62
CLN6-205ENST00000564846 COL18A1P39060 1754 aa25.17■■□□□ 1.62
CLN6-205ENST00000564846 SSH1Q8WYL5 1049 aa25.17■■□□□ 1.62
CLN6-205ENST00000564846 KIAA0232Q92628 1395 aa25.16■■□□□ 1.62
CLN6-205ENST00000564846 RGPD2P0DJD1 1756 aa25.16■■□□□ 1.62
CLN6-205ENST00000564846 AMOTQ4VCS5 1084 aa25.16■■□□□ 1.62
CLN6-205ENST00000564846 VAMP4O75379 141 aa25.15■■□□□ 1.62
CLN6-205ENST00000564846 PLEKHO1Q53GL0 409 aaPredicted RBP25.15■■□□□ 1.62
CLN6-205ENST00000564846 LMO7Q8WWI1 1683 aa25.14■■□□□ 1.61
CLN6-205ENST00000564846 ZKSCAN2Q63HK3 967 aa25.13■■□□□ 1.61
CLN6-205ENST00000564846 RGPD5Q99666 1765 aa25.13■■□□□ 1.61
CLN6-205ENST00000564846 MS4A1P11836 297 aa25.13■■□□□ 1.61
CLN6-205ENST00000564846 HAP1P54257 671 aaPredicted RBP25.13■■□□□ 1.61
CLN6-205ENST00000564846 TWISTNBQ3B726 338 aaPredicted RBP25.13■■□□□ 1.61
CLN6-205ENST00000564846 BRPF1P55201 1214 aaPredicted RBP25.12■■□□□ 1.61
CLN6-205ENST00000564846 CHRNA2Q15822 529 aa25.12■■□□□ 1.61
CLN6-205ENST00000564846 KIF16BQ96L93 1317 aa25.12■■□□□ 1.61
CLN6-205ENST00000564846 LRRC37A3O60309 1634 aa25.11■■□□□ 1.61
CLN6-205ENST00000564846 TSPYL6Q8N831 410 aa25.1■■□□□ 1.61
CLN6-205ENST00000564846 C8orf58Q8NAV2 365 aa25.1■■□□□ 1.61
CLN6-205ENST00000564846 PRDM11Q9NQV5 511 aa25.1■■□□□ 1.61
CLN6-205ENST00000564846 FAM208AQ9UK61 1670 aaKnown RBP25.1■■□□□ 1.61
CLN6-205ENST00000564846 IPO8O15397 1037 aaKnown RBP25.09■■□□□ 1.61
CLN6-205ENST00000564846 IL17REQ8NFR9 667 aa25.09■■□□□ 1.61
CLN6-205ENST00000564846 PANK1Q8TE04 598 aa25.09■■□□□ 1.61
CLN6-205ENST00000564846 BABAM1Q9NWV8 329 aa25.09■■□□□ 1.61
CLN6-205ENST00000564846 NLRP2Q9NX02 1062 aa25.09■■□□□ 1.61
CLN6-205ENST00000564846 PLEKHG2Q9H7P9 1386 aa25.08■■□□□ 1.61
CLN6-205ENST00000564846 CSB-PGBD3P0DP91 1061 aa25.08■■□□□ 1.61
CLN6-205ENST00000564846 AKAP4Q5JQC9 854 aa25.08■■□□□ 1.61
CLN6-205ENST00000564846 ROBO1Q9Y6N7 1651 aa25.08■■□□□ 1.61
CLN6-205ENST00000564846 TSPYL4Q9UJ04 414 aa25.08■■□□□ 1.6
CLN6-205ENST00000564846 AAMPQ13685 434 aa25.07■■□□□ 1.6
CLN6-205ENST00000564846 ZNF530Q6P9A1 599 aaPredicted RBP25.07■■□□□ 1.6
CLN6-205ENST00000564846 AHDC1Q5TGY3 1603 aaPredicted RBP25.07■■□□□ 1.6
CLN6-205ENST00000564846 ABCA3Q99758 1704 aa25.07■■□□□ 1.6
CLN6-205ENST00000564846 ELL2O00472 640 aaPredicted RBP25.06■■□□□ 1.6
CLN6-205ENST00000564846 RAPGEF4Q8WZA2 1011 aa25.06■■□□□ 1.6
CLN6-205ENST00000564846 NOB1Q9ULX3 412 aaKnown RBP25.06■■□□□ 1.6
CLN6-205ENST00000564846 COG6Q9Y2V7 657 aa25.06■■□□□ 1.6
CLN6-205ENST00000564846 CEMIPQ8WUJ3 1361 aa25.06■■□□□ 1.6
CLN6-205ENST00000564846 ATF7IPQ6VMQ6 1270 aa25.05■■□□□ 1.6
CLN6-205ENST00000564846 DZIP1LQ8IYY4 767 aaKnown RBP25.05■■□□□ 1.6
CLN6-205ENST00000564846 TAF7Q15545 349 aaPredicted RBP25.05■■□□□ 1.6
CLN6-205ENST00000564846 C1orf141Q5JVX7 400 aa25.05■■□□□ 1.6
CLN6-205ENST00000564846 FTSJ3Q8IY81 847 aaKnown RBP25.04■■□□□ 1.6
CLN6-205ENST00000564846 MRPL50Q8N5N7 158 aaKnown RBP25.04■■□□□ 1.6
CLN6-205ENST00000564846 RLBP1P12271 317 aa25.03■■□□□ 1.6
CLN6-205ENST00000564846 TRIM27P14373 513 aa25.03■■□□□ 1.6
CLN6-205ENST00000564846 TATP17735 454 aaPredicted RBP25.03■■□□□ 1.6
CLN6-205ENST00000564846 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.03■■□□□ 1.6
CLN6-205ENST00000564846 MIS18AQ9NYP9 233 aa25.03■■□□□ 1.6
CLN6-205ENST00000564846 ARHGAP45Q92619 1136 aa25.02■■□□□ 1.6
CLN6-205ENST00000564846 CLUAP1Q96AJ1 413 aa25.02■■□□□ 1.6
CLN6-205ENST00000564846 OVOS2A0A0G2JMS6 1433 aa25.01■■□□□ 1.59
CLN6-205ENST00000564846 TNNQ9UQP3 1299 aa25.01■■□□□ 1.59
CLN6-205ENST00000564846 WDR17Q8IZU2 1322 aa25.01■■□□□ 1.59
CLN6-205ENST00000564846 MVPQ14764 893 aaKnown RBP25■■□□□ 1.59
CLN6-205ENST00000564846 KRT24Q2M2I5 525 aa24.99■■□□□ 1.59
CLN6-205ENST00000564846 SPG7Q9UQ90 795 aa24.99■■□□□ 1.59
CLN6-205ENST00000564846 SOS1Q07889 1333 aaPredicted RBP24.99■■□□□ 1.59
CLN6-205ENST00000564846 COL5A2P05997 1499 aaPredicted RBP24.99■■□□□ 1.59
CLN6-205ENST00000564846 LGR6Q9HBX8 967 aa24.98■■□□□ 1.59
CLN6-205ENST00000564846 TOM1O60784 492 aa24.98■■□□□ 1.59
CLN6-205ENST00000564846 MEGF6O75095 1541 aa24.97■■□□□ 1.59
CLN6-205ENST00000564846 RNMTO43148 476 aaKnown RBP24.96■■□□□ 1.59
CLN6-205ENST00000564846 TEFQ10587 303 aa24.96■■□□□ 1.59
CLN6-205ENST00000564846 COL22A1Q8NFW1 1626 aaPredicted RBP24.96■■□□□ 1.59
CLN6-205ENST00000564846 MPRIPQ6WCQ1 1025 aa24.95■■□□□ 1.59
CLN6-205ENST00000564846 TOM1L2Q6ZVM7 507 aa24.95■■□□□ 1.58
CLN6-205ENST00000564846 CENPQQ7L2Z9 268 aaPredicted RBP24.94■■□□□ 1.58
CLN6-205ENST00000564846 DDX19BQ9UMR2 479 aa24.94■■□□□ 1.58
CLN6-205ENST00000564846 KDM2BQ8NHM5 1336 aa24.94■■□□□ 1.58
CLN6-205ENST00000564846 TCERG1O14776 1098 aaKnown RBP24.93■■□□□ 1.58
CLN6-205ENST00000564846 API5Q9BZZ5 524 aaKnown RBP24.93■■□□□ 1.58
CLN6-205ENST00000564846 CARD10Q9BWT7 1032 aa24.93■■□□□ 1.58
CLN6-205ENST00000564846 ADAMTS7Q9UKP4 1686 aa24.92■■□□□ 1.58
CLN6-205ENST00000564846 PHKG2P15735 406 aa24.91■■□□□ 1.58
CLN6-205ENST00000564846 EVA1CP58658 441 aa24.91■■□□□ 1.58
CLN6-205ENST00000564846 IFNL2Q8IZJ0 200 aa24.91■■□□□ 1.58
CLN6-205ENST00000564846 TMEM57Q8N5G2 664 aa24.91■■□□□ 1.58
CLN6-205ENST00000564846 ITPRIPQ8IWB1 547 aa24.9■■□□□ 1.58
CLN6-205ENST00000564846 BTBD11A6QL63 1104 aa24.9■■□□□ 1.58
CLN6-205ENST00000564846 PKD1L3Q7Z443 1732 aa24.9■■□□□ 1.58
CLN6-205ENST00000564846 PHLPP1O60346 1717 aa24.88■■□□□ 1.57
CLN6-205ENST00000564846 ABCC4O15439 1325 aa24.88■■□□□ 1.57
CLN6-205ENST00000564846 STRN4Q9NRL3 753 aa24.88■■□□□ 1.57
CLN6-205ENST00000564846 COL16A1Q07092 1604 aaPredicted RBP24.88■■□□□ 1.57
CLN6-205ENST00000564846 PTPRCP08575 1304 aa24.88■■□□□ 1.57
CLN6-205ENST00000564846 HSP90AB1P08238 724 aaKnown RBP24.88■■□□□ 1.57
CLN6-205ENST00000564846 CCDC30Q5VVM6 783 aa24.88■■□□□ 1.57
CLN6-205ENST00000564846 CHMP4BQ9H444 224 aaKnown RBP24.88■■□□□ 1.57
CLN6-205ENST00000564846 KDM3BQ7LBC6 1761 aa24.87■■□□□ 1.57
CLN6-205ENST00000564846 CHMP4AQ9BY43 222 aa24.87■■□□□ 1.57
CLN6-205ENST00000564846 COL14A1Q05707 1796 aaKnown RBP24.86■■□□□ 1.57
CLN6-205ENST00000564846 SLC4A2P04920 1241 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms