RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 PHAXQ9H814 394 aaKnown RBP4.2□□□□□ -1.74
CHD9-213ENST00000564845 MYL6BP14649 208 aa4.2□□□□□ -1.74
CHD9-213ENST00000564845 EVC2Q86UK5 1308 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 ARHGAP23Q9P227 1491 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 DIAPH1O60610 1272 aaKnown RBP4.19□□□□□ -1.74
CHD9-213ENST00000564845 TRIM27P14373 513 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 AMPHP49418 695 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 ZRSR1Q15695 479 aaKnown RBP4.19□□□□□ -1.74
CHD9-213ENST00000564845 ABCC11Q96J66 1382 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 STK11IPQ8N1F8 1099 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 SLC51AQ86UW1 340 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 DDRGK1Q96HY6 314 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 NKTRP30414 1462 aaKnown RBP4.19□□□□□ -1.74
CHD9-213ENST00000564845 PREX1Q8TCU6 1659 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 RGPD1P0DJD0 1748 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 TMPOP42166 694 aaKnown RBP4.19□□□□□ -1.74
CHD9-213ENST00000564845 SYTL4Q96C24 671 aaPredicted RBP4.19□□□□□ -1.74
CHD9-213ENST00000564845 AXIN2Q9Y2T1 843 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 RGS12O14924 1447 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 CGNL1Q0VF96 1302 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 ANKRD45Q5TZF3 282 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 STRN4Q9NRL3 753 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 FANCIQ9NVI1 1328 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 CCDC24Q8N4L8 307 aa4.19□□□□□ -1.74
CHD9-213ENST00000564845 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.19□□□□□ -1.74
CHD9-213ENST00000564845 NUTM2BA6NNL0 878 aaPredicted RBP4.18□□□□□ -1.74
CHD9-213ENST00000564845 NUTM2EB1AL46 878 aaPredicted RBP4.18□□□□□ -1.74
CHD9-213ENST00000564845 RARSP54136 660 aaKnown RBP4.18□□□□□ -1.74
CHD9-213ENST00000564845 NUTM2AQ8IVF1 878 aaPredicted RBP4.18□□□□□ -1.74
CHD9-213ENST00000564845 MPNDQ8N594 471 aa4.18□□□□□ -1.74
CHD9-213ENST00000564845 PLEKHF1Q96S99 279 aa4.18□□□□□ -1.74
CHD9-213ENST00000564845 PTPRUQ92729 1446 aa4.18□□□□□ -1.74
CHD9-213ENST00000564845 SIL1Q9H173 461 aa4.18□□□□□ -1.74
CHD9-213ENST00000564845 MBIPQ9NS73 344 aa4.18□□□□□ -1.74
CHD9-213ENST00000564845 POLR3AO14802 1390 aaPredicted RBP4.18□□□□□ -1.74
CHD9-213ENST00000564845 NINLQ9Y2I6 1382 aa4.18□□□□□ -1.74
CHD9-213ENST00000564845 CHAF1AQ13111 956 aaPredicted RBP4.18□□□□□ -1.74
CHD9-213ENST00000564845 EIF4A2Q14240 407 aaKnown RBP4.18□□□□□ -1.74
CHD9-213ENST00000564845 MTHFSDQ2M296 383 aaKnown RBP4.18□□□□□ -1.74
CHD9-213ENST00000564845 IL1RAPL2Q9NP60 686 aa4.18□□□□□ -1.74
CHD9-213ENST00000564845 PDZRN3Q9UPQ7 1066 aa4.18□□□□□ -1.74
CHD9-213ENST00000564845 PPIP5K1Q6PFW1 1433 aa4.18□□□□□ -1.74
CHD9-213ENST00000564845 ATP7BP35670 1465 aa4.18□□□□□ -1.74
CHD9-213ENST00000564845 NCAPD2Q15021 1401 aa4.18□□□□□ -1.74
CHD9-213ENST00000564845 HDGFL2Q7Z4V5 671 aaPredicted RBP4.17□□□□□ -1.74
CHD9-213ENST00000564845 GLI3P10071 1580 aa4.17□□□□□ -1.74
CHD9-213ENST00000564845 COG3Q96JB2 828 aa4.17□□□□□ -1.74
CHD9-213ENST00000564845 NOP58Q9Y2X3 529 aaKnown RBP4.17□□□□□ -1.74
CHD9-213ENST00000564845 EXOC6BQ9Y2D4 811 aa4.17□□□□□ -1.74
CHD9-213ENST00000564845 SLC4A8Q2Y0W8 1093 aa4.17□□□□□ -1.74
CHD9-213ENST00000564845 RUNDC1Q96C34 613 aa4.17□□□□□ -1.74
CHD9-213ENST00000564845 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.17□□□□□ -1.74
CHD9-213ENST00000564845 PTCD1O75127 700 aaKnown RBP4.17□□□□□ -1.74
CHD9-213ENST00000564845 DEKP35659 375 aaKnown RBP4.17□□□□□ -1.74
CHD9-213ENST00000564845 YTHDC2Q9H6S0 1430 aaKnown RBP4.17□□□□□ -1.74
CHD9-213ENST00000564845 WASLO00401 505 aaPredicted RBP4.17□□□□□ -1.74
CHD9-213ENST00000564845 NALCNQ8IZF0 1738 aa4.17□□□□□ -1.74
CHD9-213ENST00000564845 FRAT2O75474 233 aaPredicted RBP4.17□□□□□ -1.74
CHD9-213ENST00000564845 PSME1Q06323 249 aa4.17□□□□□ -1.74
CHD9-213ENST00000564845 COL9A3Q14050 684 aaPredicted RBP4.17□□□□□ -1.74
CHD9-213ENST00000564845 CPS1P31327 1500 aa4.17□□□□□ -1.74
CHD9-213ENST00000564845 SLC4A2P04920 1241 aa4.17□□□□□ -1.74
CHD9-213ENST00000564845 MEIS3Q99687 375 aa4.17□□□□□ -1.74
CHD9-213ENST00000564845 TOPAZ1Q8N9V7 1692 aa4.16□□□□□ -1.74
CHD9-213ENST00000564845 C8orf34Q49A92 452 aa4.16□□□□□ -1.74
CHD9-213ENST00000564845 C3P01024 1663 aa4.16□□□□□ -1.74
CHD9-213ENST00000564845 CD2BP2O95400 341 aaKnown RBP4.16□□□□□ -1.74
CHD9-213ENST00000564845 USP54Q70EL1 1684 aa4.16□□□□□ -1.74
CHD9-213ENST00000564845 HSP90AB3PQ58FF7 597 aa4.16□□□□□ -1.74
CHD9-213ENST00000564845 ADAMTS2O95450 1211 aa4.16□□□□□ -1.74
CHD9-213ENST00000564845 PUS7Q96PZ0 661 aaKnown RBP4.16□□□□□ -1.74
CHD9-213ENST00000564845 EYA1Q99502 592 aa4.16□□□□□ -1.74
CHD9-213ENST00000564845 ALKQ9UM73 1620 aa4.16□□□□□ -1.74
CHD9-213ENST00000564845 FOSBP53539 338 aa4.16□□□□□ -1.74
CHD9-213ENST00000564845 RIMS2Q9UQ26 1411 aa4.16□□□□□ -1.74
CHD9-213ENST00000564845 FAM161AQ3B820 660 aa4.16□□□□□ -1.74
CHD9-213ENST00000564845 C5orf42Q9H799 3197 aa4.16□□□□□ -1.74
CHD9-213ENST00000564845 QRICH2Q9H0J4 1663 aa4.15□□□□□ -1.74
CHD9-213ENST00000564845 CSPP1Q1MSJ5 1256 aa4.15□□□□□ -1.74
CHD9-213ENST00000564845 PROSER3Q2NL68 480 aa4.15□□□□□ -1.74
CHD9-213ENST00000564845 HSP90AA1P07900 732 aaKnown RBP4.15□□□□□ -1.74
CHD9-213ENST00000564845 MAP3K19Q56UN5 1328 aa4.15□□□□□ -1.74
CHD9-213ENST00000564845 SYNE4Q8N205 404 aa4.15□□□□□ -1.74
CHD9-213ENST00000564845 CWF19L2Q2TBE0 894 aaKnown RBP4.15□□□□□ -1.74
CHD9-213ENST00000564845 PA2G4Q9UQ80 394 aaKnown RBP4.15□□□□□ -1.74
CHD9-213ENST00000564845 CSB-PGBD3P0DP91 1061 aa4.15□□□□□ -1.75
CHD9-213ENST00000564845 TWISTNBQ3B726 338 aaPredicted RBP4.15□□□□□ -1.75
CHD9-213ENST00000564845 NUTM1Q86Y26 1132 aa4.15□□□□□ -1.75
CHD9-213ENST00000564845 NBPF6Q5VWK0 638 aa4.15□□□□□ -1.75
CHD9-213ENST00000564845 NBPF4Q96M43 638 aa4.15□□□□□ -1.75
CHD9-213ENST00000564845 ARID3AQ99856 593 aa4.15□□□□□ -1.75
CHD9-213ENST00000564845 KNDC1Q76NI1 1749 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 ATP5J2-PTCD1G3V325 749 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 SNAP23O00161 211 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 GOLGA6L1Q8N7Z2 621 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 EDC3Q96F86 508 aaKnown RBP4.14□□□□□ -1.75
CHD9-213ENST00000564845 TERF2IPQ9NYB0 399 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 SYAP1Q96A49 352 aaPredicted RBP4.14□□□□□ -1.75
CHD9-213ENST00000564845 MED1Q15648 1581 aaPredicted RBP4.14□□□□□ -1.75
CHD9-213ENST00000564845 LMOD3Q0VAK6 560 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms