RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	EVA1C	P58658	441 aa		13	□□□□□ -0.33
SIN3A-205	ENST00000564778	NFE2L2	Q16236	605 aa		13	□□□□□ -0.33
SIN3A-205	ENST00000564778	CCDC27	Q2M243	656 aa		13	□□□□□ -0.33
SIN3A-205	ENST00000564778	UNC5CL	Q8IV45	518 aa		13	□□□□□ -0.33
SIN3A-205	ENST00000564778	YTHDC1	Q96MU7	727 aa	Known RBP	13	□□□□□ -0.33
SIN3A-205	ENST00000564778	DLG5	Q8TDM6	1919 aa		13	□□□□□ -0.33
SIN3A-205	ENST00000564778	ZNF521	Q96K83	1311 aa		12.99	□□□□□ -0.33
SIN3A-205	ENST00000564778	TMPO	P42166	694 aa	Known RBP	12.99	□□□□□ -0.33
SIN3A-205	ENST00000564778	RGS12	O14924	1447 aa		12.98	□□□□□ -0.33
SIN3A-205	ENST00000564778	SPATA31A1	Q5TZJ5	1347 aa		12.98	□□□□□ -0.33
SIN3A-205	ENST00000564778	SPATA31A5	Q5VU36	1347 aa		12.98	□□□□□ -0.33
SIN3A-205	ENST00000564778	SPATA31A7	Q8IWB4	1347 aa		12.98	□□□□□ -0.33
SIN3A-205	ENST00000564778	VPS72	Q15906	364 aa		12.98	□□□□□ -0.33
SIN3A-205	ENST00000564778	GAS2L2	Q8NHY3	880 aa		12.98	□□□□□ -0.33
SIN3A-205	ENST00000564778	RAPGEF4	Q8WZA2	1011 aa		12.98	□□□□□ -0.33
SIN3A-205	ENST00000564778	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.98	□□□□□ -0.33	6e-9	■■■■□ 22.1
SIN3A-205	ENST00000564778	SHANK3	Q9BYB0	1731 aa		12.97	□□□□□ -0.33
SIN3A-205	ENST00000564778	AMOT	Q4VCS5	1084 aa		12.97	□□□□□ -0.33
SIN3A-205	ENST00000564778	THRAP3	Q9Y2W1	955 aa	Known RBP	12.97	□□□□□ -0.33
SIN3A-205	ENST00000564778	LRRC37A3	O60309	1634 aa		12.97	□□□□□ -0.33
SIN3A-205	ENST00000564778	ADAMTS7	Q9UKP4	1686 aa		12.96	□□□□□ -0.33
SIN3A-205	ENST00000564778	IL2RB	P14784	551 aa		12.96	□□□□□ -0.33
SIN3A-205	ENST00000564778	TAT	P17735	454 aa	Predicted RBP	12.96	□□□□□ -0.33
SIN3A-205	ENST00000564778	MTHFSD	Q2M296	383 aa	Known RBP	12.96	□□□□□ -0.33
SIN3A-205	ENST00000564778	GLI3	P10071	1580 aa		12.95	□□□□□ -0.34
SIN3A-205	ENST00000564778	LMOD3	Q0VAK6	560 aa		12.95	□□□□□ -0.34
SIN3A-205	ENST00000564778	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.95	□□□□□ -0.34
SIN3A-205	ENST00000564778	BARGIN	Q6ZT62	677 aa		12.95	□□□□□ -0.34
SIN3A-205	ENST00000564778	GJD4	Q96KN9	370 aa	Predicted RBP	12.95	□□□□□ -0.34
SIN3A-205	ENST00000564778	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.95	□□□□□ -0.34
SIN3A-205	ENST00000564778	TRIM35	Q9UPQ4	493 aa		12.95	□□□□□ -0.34
SIN3A-205	ENST00000564778	RRP7A	Q9Y3A4	280 aa	Known RBP	12.95	□□□□□ -0.34
SIN3A-205	ENST00000564778	THSD7A	Q9UPZ6	1657 aa		12.95	□□□□□ -0.34
SIN3A-205	ENST00000564778	TNS2	Q63HR2	1409 aa		12.95	□□□□□ -0.34
SIN3A-205	ENST00000564778	MAP3K5	Q99683	1374 aa		12.94	□□□□□ -0.34
SIN3A-205	ENST00000564778	RIPK4	P57078	832 aa		12.94	□□□□□ -0.34
SIN3A-205	ENST00000564778	WWC1	Q8IX03	1113 aa		12.94	□□□□□ -0.34
SIN3A-205	ENST00000564778	HTATSF1	O43719	755 aa	Known RBP	12.93	□□□□□ -0.34
SIN3A-205	ENST00000564778	PDE3B	Q13370	1112 aa		12.93	□□□□□ -0.34
SIN3A-205	ENST00000564778	PCDH11X	Q9BZA7	1347 aa		12.92	□□□□□ -0.34
SIN3A-205	ENST00000564778	PCDH11Y	Q9BZA8	1340 aa		12.92	□□□□□ -0.34
SIN3A-205	ENST00000564778	AKAP4	Q5JQC9	854 aa		12.92	□□□□□ -0.34
SIN3A-205	ENST00000564778	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.92	□□□□□ -0.34
SIN3A-205	ENST00000564778	WDR63	Q8IWG1	891 aa		12.92	□□□□□ -0.34
SIN3A-205	ENST00000564778	USP35	Q9P2H5	1018 aa		12.92	□□□□□ -0.34
SIN3A-205	ENST00000564778	SPG7	Q9UQ90	795 aa		12.92	□□□□□ -0.34
SIN3A-205	ENST00000564778	CCDC9	Q9Y3X0	531 aa	Known RBP	12.92	□□□□□ -0.34
SIN3A-205	ENST00000564778	CEMIP	Q8WUJ3	1361 aa		12.92	□□□□□ -0.34
SIN3A-205	ENST00000564778	MRC1	P22897	1456 aa		12.91	□□□□□ -0.34
SIN3A-205	ENST00000564778	IL16	Q14005	1332 aa		12.91	□□□□□ -0.34
SIN3A-205	ENST00000564778	VIRMA	Q69YN4	1812 aa	Known RBP	12.91	□□□□□ -0.34
SIN3A-205	ENST00000564778	SENP3-EIF4A1	A0A087X0R7	540 aa		12.91	□□□□□ -0.34
SIN3A-205	ENST00000564778	GNAT3	A8MTJ3	354 aa		12.91	□□□□□ -0.34
SIN3A-205	ENST00000564778	NEUROD2	Q15784	382 aa		12.91	□□□□□ -0.34
SIN3A-205	ENST00000564778	SALL2	Q9Y467	1007 aa	Predicted RBP	12.91	□□□□□ -0.34
SIN3A-205	ENST00000564778	SCN11A	Q9UI33	1791 aa		12.91	□□□□□ -0.34
SIN3A-205	ENST00000564778	KDM6A	O15550	1401 aa	Predicted RBP	12.9	□□□□□ -0.34
SIN3A-205	ENST00000564778	PHKG2	P15735	406 aa		12.9	□□□□□ -0.34
SIN3A-205	ENST00000564778	ZCRB1	Q8TBF4	217 aa	Known RBP	12.9	□□□□□ -0.34
SIN3A-205	ENST00000564778	CYP27B1	O15528	508 aa		12.89	□□□□□ -0.35
SIN3A-205	ENST00000564778	CALD1	Q05682	793 aa	Known RBP	12.89	□□□□□ -0.35
SIN3A-205	ENST00000564778	GOLGA2	Q08379	1002 aa		12.89	□□□□□ -0.35
SIN3A-205	ENST00000564778	C1orf141	Q5JVX7	400 aa		12.89	□□□□□ -0.35
SIN3A-205	ENST00000564778	IFNL2	Q8IZJ0	200 aa		12.89	□□□□□ -0.35
SIN3A-205	ENST00000564778	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.89	□□□□□ -0.35
SIN3A-205	ENST00000564778	SIPA1L3	O60292	1781 aa	Predicted RBP	12.89	□□□□□ -0.35
SIN3A-205	ENST00000564778	HSP90AB1	P08238	724 aa	Known RBP	12.88	□□□□□ -0.35
SIN3A-205	ENST00000564778	NKX1-1	Q15270	411 aa	Predicted RBP	12.88	□□□□□ -0.35
SIN3A-205	ENST00000564778	RTF1	Q92541	710 aa	Known RBP	12.88	□□□□□ -0.35
SIN3A-205	ENST00000564778	EP400	Q96L91	3159 aa		12.88	□□□□□ -0.35
SIN3A-205	ENST00000564778		E9PSI1	815 aa		12.87	□□□□□ -0.35
SIN3A-205	ENST00000564778	ONECUT3	O60422	494 aa	Predicted RBP	12.87	□□□□□ -0.35
SIN3A-205	ENST00000564778	TRMT2A	Q8IZ69	625 aa	Known RBP	12.87	□□□□□ -0.35
SIN3A-205	ENST00000564778	TOGARAM1	Q9Y4F4	1720 aa		12.87	□□□□□ -0.35
SIN3A-205	ENST00000564778		A0A0G2JS52	829 aa		12.86	□□□□□ -0.35
SIN3A-205	ENST00000564778	ZNF853	P0CG23	659 aa		12.86	□□□□□ -0.35
SIN3A-205	ENST00000564778	MYT1	Q01538	1121 aa		12.86	□□□□□ -0.35
SIN3A-205	ENST00000564778	SLFN5	Q08AF3	891 aa		12.86	□□□□□ -0.35
SIN3A-205	ENST00000564778	DDB1	Q16531	1140 aa		12.86	□□□□□ -0.35
SIN3A-205	ENST00000564778	FAM98C	Q17RN3	349 aa	Known RBP	12.86	□□□□□ -0.35
SIN3A-205	ENST00000564778	MCM10	Q7L590	875 aa		12.86	□□□□□ -0.35
SIN3A-205	ENST00000564778	IL17RE	Q8NFR9	667 aa		12.86	□□□□□ -0.35
SIN3A-205	ENST00000564778	DCAF5	Q96JK2	942 aa		12.86	□□□□□ -0.35
SIN3A-205	ENST00000564778	THUMPD2	Q9BTF0	503 aa	Known RBP	12.86	□□□□□ -0.35
SIN3A-205	ENST00000564778	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.86	□□□□□ -0.35
SIN3A-205	ENST00000564778	IFT57	Q9NWB7	429 aa		12.86	□□□□□ -0.35
SIN3A-205	ENST00000564778	EXOC5	O00471	708 aa		12.85	□□□□□ -0.35
SIN3A-205	ENST00000564778	RNMT	O43148	476 aa	Known RBP	12.85	□□□□□ -0.35
SIN3A-205	ENST00000564778	DCTN1	Q14203	1278 aa		12.85	□□□□□ -0.35
SIN3A-205	ENST00000564778	SEPT12	Q8IYM1	358 aa		12.85	□□□□□ -0.35
SIN3A-205	ENST00000564778	CDCA7L	Q96GN5	454 aa		12.85	□□□□□ -0.35
SIN3A-205	ENST00000564778	BABAM1	Q9NWV8	329 aa		12.85	□□□□□ -0.35
SIN3A-205	ENST00000564778	BRWD3	Q6RI45	1802 aa		12.85	□□□□□ -0.35
SIN3A-205	ENST00000564778	KDM3B	Q7LBC6	1761 aa		12.84	□□□□□ -0.35
SIN3A-205	ENST00000564778	CENPB	P07199	599 aa	Predicted RBP	12.84	□□□□□ -0.35
SIN3A-205	ENST00000564778	GNAI1	P63096	354 aa		12.84	□□□□□ -0.35
SIN3A-205	ENST00000564778	DUSP27	Q5VZP5	1158 aa		12.84	□□□□□ -0.35
SIN3A-205	ENST00000564778	MPRIP	Q6WCQ1	1025 aa		12.84	□□□□□ -0.35
SIN3A-205	ENST00000564778	CFAP44	Q96MT7	982 aa		12.84	□□□□□ -0.35
SIN3A-205	ENST00000564778	MYH16	Q9H6N6	1097 aa		12.84	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms