RNA–Protein interactions for RNA: ENST00000564701.1

ACSM3-209, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 3

Gene ACSM3, Length 756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-209ENST00000564701 AXIN2Q9Y2T1 843 aa11.56□□□□□ -0.56
ACSM3-209ENST00000564701 RRP7AQ9Y3A4 280 aaKnown RBP11.56□□□□□ -0.56
ACSM3-209ENST00000564701 CAMTA1Q9Y6Y1 1673 aa11.55□□□□□ -0.56
ACSM3-209ENST00000564701 HTATSF1O43719 755 aaKnown RBP11.55□□□□□ -0.56
ACSM3-209ENST00000564701 AMOTQ4VCS5 1084 aa11.55□□□□□ -0.56
ACSM3-209ENST00000564701 SENP3-EIF4A1A0A087X0R7 540 aa11.54□□□□□ -0.56
ACSM3-209ENST00000564701 CHRNA2Q15822 529 aa11.54□□□□□ -0.56
ACSM3-209ENST00000564701 TRMT2AQ8IZ69 625 aaKnown RBP11.54□□□□□ -0.56
ACSM3-209ENST00000564701 TRPC5Q9UL62 973 aaPredicted RBP11.54□□□□□ -0.56
ACSM3-209ENST00000564701 TRIM35Q9UPQ4 493 aa11.54□□□□□ -0.56
ACSM3-209ENST00000564701 WDR17Q8IZU2 1322 aa11.54□□□□□ -0.56
ACSM3-209ENST00000564701 LMO7Q8WWI1 1683 aa11.53□□□□□ -0.56
ACSM3-209ENST00000564701 PLEKHO1Q53GL0 409 aaPredicted RBP11.53□□□□□ -0.56
ACSM3-209ENST00000564701 DUSP27Q5VZP5 1158 aa11.53□□□□□ -0.56
ACSM3-209ENST00000564701 PPP4R3CPQ6ZMV5 832 aa11.53□□□□□ -0.56
ACSM3-209ENST00000564701 RTF1Q92541 710 aaKnown RBP11.53□□□□□ -0.56
ACSM3-209ENST00000564701 CDCA7LQ96GN5 454 aa11.53□□□□□ -0.56
ACSM3-209ENST00000564701 NLRP2Q9NX02 1062 aa11.53□□□□□ -0.56
ACSM3-209ENST00000564701 COL14A1Q05707 1796 aaKnown RBP11.53□□□□□ -0.56
ACSM3-209ENST00000564701 RGPD5Q99666 1765 aa11.53□□□□□ -0.56
ACSM3-209ENST00000564701 NEFLP07196 543 aa11.52□□□□□ -0.57
ACSM3-209ENST00000564701 RAPGEF4Q8WZA2 1011 aa11.52□□□□□ -0.57
ACSM3-209ENST00000564701 ATRNO75882 1429 aa11.52□□□□□ -0.57
ACSM3-209ENST00000564701 COL5A2P05997 1499 aaPredicted RBP11.51□□□□□ -0.57
ACSM3-209ENST00000564701 BCL9LQ86UU0 1499 aa11.51□□□□□ -0.57
ACSM3-209ENST00000564701 CT47B1P0C2W7 299 aaPredicted RBP11.51□□□□□ -0.57
ACSM3-209ENST00000564701 EVA1CP58658 441 aa11.51□□□□□ -0.57
ACSM3-209ENST00000564701 GNAI1P63096 354 aa11.51□□□□□ -0.57
ACSM3-209ENST00000564701 MTHFSDQ2M296 383 aaKnown RBP11.51□□□□□ -0.57
ACSM3-209ENST00000564701 USHBP1Q8N6Y0 703 aa11.51□□□□□ -0.57
ACSM3-209ENST00000564701 CARD10Q9BWT7 1032 aa11.51□□□□□ -0.57
ACSM3-209ENST00000564701 IFT57Q9NWB7 429 aa11.51□□□□□ -0.57
ACSM3-209ENST00000564701 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.51□□□□□ -0.579e-7■■■■□ 19.5
ACSM3-209ENST00000564701 DLG5Q8TDM6 1919 aa11.5□□□□□ -0.57
ACSM3-209ENST00000564701 RGPD2P0DJD1 1756 aa11.5□□□□□ -0.57
ACSM3-209ENST00000564701 FAM83GA6ND36 823 aa11.5□□□□□ -0.57
ACSM3-209ENST00000564701 GNAT3A8MTJ3 354 aa11.5□□□□□ -0.57
ACSM3-209ENST00000564701 TATP17735 454 aaPredicted RBP11.5□□□□□ -0.57
ACSM3-209ENST00000564701 TOM1L2Q6ZVM7 507 aa11.5□□□□□ -0.57
ACSM3-209ENST00000564701 MAP3K5Q99683 1374 aa11.5□□□□□ -0.57
ACSM3-209ENST00000564701 AKAP4Q5JQC9 854 aa11.49□□□□□ -0.57
ACSM3-209ENST00000564701 C1orf141Q5JVX7 400 aa11.49□□□□□ -0.57
ACSM3-209ENST00000564701 RCAN3Q9UKA8 241 aa11.49□□□□□ -0.57
ACSM3-209ENST00000564701 SPG7Q9UQ90 795 aa11.49□□□□□ -0.57
ACSM3-209ENST00000564701 UNC5CLQ8IV45 518 aa11.48□□□□□ -0.57
ACSM3-209ENST00000564701 GJD4Q96KN9 370 aaPredicted RBP11.48□□□□□ -0.57
ACSM3-209ENST00000564701 CFAP44Q96MT7 982 aa11.48□□□□□ -0.57
ACSM3-209ENST00000564701 BABAM1Q9NWV8 329 aa11.48□□□□□ -0.57
ACSM3-209ENST00000564701 BTG4Q9NY30 223 aa11.48□□□□□ -0.57
ACSM3-209ENST00000564701 CRB1P82279 1406 aa11.48□□□□□ -0.57
ACSM3-209ENST00000564701 OVOS2A0A0G2JMS6 1433 aa11.47□□□□□ -0.57
ACSM3-209ENST00000564701 ZNF530Q6P9A1 599 aaPredicted RBP11.47□□□□□ -0.57
ACSM3-209ENST00000564701 SPINK5Q9NQ38 1064 aaPredicted RBP11.47□□□□□ -0.57
ACSM3-209ENST00000564701 SUPT16HQ9Y5B9 1047 aaKnown RBP11.47□□□□□ -0.57
ACSM3-209ENST00000564701 FANCIQ9NVI1 1328 aa11.46□□□□□ -0.57
ACSM3-209ENST00000564701 HSP90AB1P08238 724 aaKnown RBP11.46□□□□□ -0.57
ACSM3-209ENST00000564701 ZNF853P0CG23 659 aa11.46□□□□□ -0.57
ACSM3-209ENST00000564701 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.46□□□□□ -0.57
ACSM3-209ENST00000564701 ZNF428Q96B54 188 aa11.46□□□□□ -0.57
ACSM3-209ENST00000564701 STRN4Q9NRL3 753 aa11.46□□□□□ -0.57
ACSM3-209ENST00000564701 PARP4Q9UKK3 1724 aaKnown RBP11.46□□□□□ -0.58
ACSM3-209ENST00000564701 NWD2Q9ULI1 1742 aa11.46□□□□□ -0.58
ACSM3-209ENST00000564701 SLIT2O94813 1529 aa11.45□□□□□ -0.58
ACSM3-209ENST00000564701 RNF123Q5XPI4 1314 aa11.45□□□□□ -0.58
ACSM3-209ENST00000564701 IL2RBP14784 551 aa11.45□□□□□ -0.58
ACSM3-209ENST00000564701 ERICH6BQ5W0A0 696 aa11.45□□□□□ -0.58
ACSM3-209ENST00000564701 CDCA7Q9BWT1 371 aaPredicted RBP11.45□□□□□ -0.58
ACSM3-209ENST00000564701 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
ACSM3-209ENST00000564701 CCDC9Q9Y3X0 531 aaKnown RBP11.45□□□□□ -0.58
ACSM3-209ENST00000564701 PLCH1Q4KWH8 1693 aa11.44□□□□□ -0.58
ACSM3-209ENST00000564701 CHL1O00533 1208 aa11.44□□□□□ -0.58
ACSM3-209ENST00000564701 LARP1Q6PKG0 1096 aaKnown RBP11.44□□□□□ -0.58
ACSM3-209ENST00000564701 MCM10Q7L590 875 aa11.44□□□□□ -0.58
ACSM3-209ENST00000564701 IFNL2Q8IZJ0 200 aa11.44□□□□□ -0.58
ACSM3-209ENST00000564701 THRAP3Q9Y2W1 955 aaKnown RBP11.44□□□□□ -0.58
ACSM3-209ENST00000564701 LAS1LQ9Y4W2 734 aaKnown RBP11.44□□□□□ -0.58
ACSM3-209ENST00000564701 GTF3C3Q9Y5Q9 886 aa11.44□□□□□ -0.58
ACSM3-209ENST00000564701 PKD1L3Q7Z443 1732 aa11.43□□□□□ -0.58
ACSM3-209ENST00000564701 CEMIPQ8WUJ3 1361 aa11.43□□□□□ -0.58
ACSM3-209ENST00000564701 LRRC37A3O60309 1634 aa11.43□□□□□ -0.58
ACSM3-209ENST00000564701 PCDH11XQ9BZA7 1347 aa11.43□□□□□ -0.58
ACSM3-209ENST00000564701 PCDH11YQ9BZA8 1340 aa11.43□□□□□ -0.58
ACSM3-209ENST00000564701 DCTN1Q14203 1278 aa11.43□□□□□ -0.58
ACSM3-209ENST00000564701 ZCRB1Q8TBF4 217 aaKnown RBP11.43□□□□□ -0.58
ACSM3-209ENST00000564701 TSR2Q969E8 191 aaKnown RBP11.43□□□□□ -0.58
ACSM3-209ENST00000564701 THUMPD2Q9BTF0 503 aaKnown RBP11.43□□□□□ -0.58
ACSM3-209ENST00000564701 CHMP4AQ9BY43 222 aa11.43□□□□□ -0.58
ACSM3-209ENST00000564701 MEGF6O75095 1541 aa11.43□□□□□ -0.58
ACSM3-209ENST00000564701 SOS1Q07889 1333 aaPredicted RBP11.42□□□□□ -0.58
ACSM3-209ENST00000564701 TEFQ10587 303 aa11.42□□□□□ -0.58
ACSM3-209ENST00000564701 TAF7Q15545 349 aaPredicted RBP11.42□□□□□ -0.58
ACSM3-209ENST00000564701 VPS72Q15906 364 aa11.42□□□□□ -0.58
ACSM3-209ENST00000564701 SEPT12Q8IYM1 358 aa11.42□□□□□ -0.58
ACSM3-209ENST00000564701 CNKSR2Q8WXI2 1034 aa11.42□□□□□ -0.58
ACSM3-209ENST00000564701 MBIPQ9NS73 344 aa11.42□□□□□ -0.58
ACSM3-209ENST00000564701 RNMTO43148 476 aaKnown RBP11.41□□□□□ -0.58
ACSM3-209ENST00000564701 PHKG2P15735 406 aa11.41□□□□□ -0.58
ACSM3-209ENST00000564701 RRP1P56182 461 aaKnown RBP11.41□□□□□ -0.58
ACSM3-209ENST00000564701 EXOSC9Q06265 439 aaKnown RBP11.41□□□□□ -0.58
ACSM3-209ENST00000564701 IL17REQ8NFR9 667 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms