RNA–Protein interactions for RNA: ENST00000564276.1

PKM-211, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-211ENST00000564276 TRAK1Q9UPV9 953 aa13.2□□□□□ -0.3
PKM-211ENST00000564276 AXIN2Q9Y2T1 843 aa13.2□□□□□ -0.3
PKM-211ENST00000564276 WDR17Q8IZU2 1322 aa13.19□□□□□ -0.3
PKM-211ENST00000564276 MIER1Q8N108 512 aa13.19□□□□□ -0.3
PKM-211ENST00000564276 CD2APQ9Y5K6 639 aa13.19□□□□□ -0.3
PKM-211ENST00000564276 ACEP12821 1306 aa13.18□□□□□ -0.3
PKM-211ENST00000564276 IGSF1Q8N6C5 1336 aa13.18□□□□□ -0.3
PKM-211ENST00000564276 TRPM1Q7Z4N2 1603 aa13.18□□□□□ -0.3
PKM-211ENST00000564276 PIK3C2AO00443 1686 aa13.18□□□□□ -0.3
PKM-211ENST00000564276 COL23A1Q86Y22 540 aaPredicted RBP13.17□□□□□ -0.3
PKM-211ENST00000564276 POLR3AO14802 1390 aaPredicted RBP13.17□□□□□ -0.3
PKM-211ENST00000564276 CICQ96RK0 1608 aaPredicted RBP13.17□□□□□ -0.3
PKM-211ENST00000564276 NLRP13Q86W25 1043 aa13.16□□□□□ -0.3
PKM-211ENST00000564276 ADGRB1O14514 1584 aa13.15□□□□□ -0.3
PKM-211ENST00000564276 ABCC6O95255 1503 aa13.15□□□□□ -0.3
PKM-211ENST00000564276 SLC27A3Q5K4L6 730 aa13.15□□□□□ -0.3
PKM-211ENST00000564276 C16orf71Q8IYS4 520 aaPredicted RBP13.15□□□□□ -0.3
PKM-211ENST00000564276 CARD10Q9BWT7 1032 aa13.15□□□□□ -0.3
PKM-211ENST00000564276 LY75O60449 1722 aa13.15□□□□□ -0.3
PKM-211ENST00000564276 CENPBP07199 599 aaPredicted RBP13.14□□□□□ -0.31
PKM-211ENST00000564276 DSG3P32926 999 aa13.14□□□□□ -0.31
PKM-211ENST00000564276 FSTL1Q12841 308 aa13.14□□□□□ -0.31
PKM-211ENST00000564276 CSB-PGBD3P0DP91 1061 aa13.13□□□□□ -0.31
PKM-211ENST00000564276 KIAA1210Q9ULL0 1709 aa13.13□□□□□ -0.31
PKM-211ENST00000564276 SLIT3O75094 1523 aa13.13□□□□□ -0.31
PKM-211ENST00000564276 L3MBTL2Q969R5 705 aa13.12□□□□□ -0.31
PKM-211ENST00000564276 PPIP5K1Q6PFW1 1433 aa13.12□□□□□ -0.31
PKM-211ENST00000564276 N4BP2Q86UW6 1770 aaPredicted RBP13.1□□□□□ -0.31
PKM-211ENST00000564276 CDK19Q9BWU1 502 aa13.1□□□□□ -0.31
PKM-211ENST00000564276 CPSF1Q10570 1443 aaKnown RBP13.09□□□□□ -0.31
PKM-211ENST00000564276 PKD1L3Q7Z443 1732 aa13.09□□□□□ -0.31
PKM-211ENST00000564276 KCPQ6ZWJ8 1503 aa13.08□□□□□ -0.31
PKM-211ENST00000564276 PLEKHG3A1L390 1219 aa13.08□□□□□ -0.32
PKM-211ENST00000564276 NLRP6P59044 892 aa13.08□□□□□ -0.32
PKM-211ENST00000564276 PDE4DIPQ5VU43 2346 aa13.08□□□□□ -0.32
PKM-211ENST00000564276 CCDC7Q96M83 1385 aa13.07□□□□□ -0.32
PKM-211ENST00000564276 FOXN1O15353 648 aa13.07□□□□□ -0.32
PKM-211ENST00000564276 CCDC61Q9Y6R9 512 aa13.07□□□□□ -0.32
PKM-211ENST00000564276 USP54Q70EL1 1684 aa13.07□□□□□ -0.32
PKM-211ENST00000564276 QRICH2Q9H0J4 1663 aa13.07□□□□□ -0.32
PKM-211ENST00000564276 DOT1LQ8TEK3 1739 aa13.07□□□□□ -0.32
PKM-211ENST00000564276 KIAA1551Q9HCM1 1747 aa13.07□□□□□ -0.32
PKM-211ENST00000564276 SOX12O15370 315 aa13.06□□□□□ -0.32
PKM-211ENST00000564276 RRAGCQ9HB90 399 aa13.06□□□□□ -0.32
PKM-211ENST00000564276 C5P01031 1676 aa13.05□□□□□ -0.32
PKM-211ENST00000564276 TNRC6CQ9HCJ0 1690 aaKnown RBP13.05□□□□□ -0.32
PKM-211ENST00000564276 TAF1LQ8IZX4 1826 aa13.05□□□□□ -0.32
PKM-211ENST00000564276 MLLT1Q03111 559 aaPredicted RBP13.05□□□□□ -0.32
PKM-211ENST00000564276 ARHGEF25Q86VW2 580 aa13.05□□□□□ -0.32
PKM-211ENST00000564276 CCNL1Q9UK58 526 aaPredicted RBP13.05□□□□□ -0.32
PKM-211ENST00000564276 ARHGAP27Q6ZUM4 889 aa13.04□□□□□ -0.32
PKM-211ENST00000564276 SMIM5Q71RC9 77 aa13.04□□□□□ -0.32
PKM-211ENST00000564276 SMC1BQ8NDV3 1235 aa13.04□□□□□ -0.32
PKM-211ENST00000564276 SYTL4Q96C24 671 aaPredicted RBP13.04□□□□□ -0.32
PKM-211ENST00000564276 TNRC18O15417 2968 aaPredicted RBP13.04□□□□□ -0.32
PKM-211ENST00000564276 EIF4G2P78344 907 aaKnown RBP eCLIP13.03□□□□□ -0.32
PKM-211ENST00000564276 C9orf131Q5VYM1 1079 aa13.03□□□□□ -0.32
PKM-211ENST00000564276 ABHD8Q96I13 439 aa13.03□□□□□ -0.32
PKM-211ENST00000564276 BCS1LQ9Y276 419 aa13.03□□□□□ -0.32
PKM-211ENST00000564276 HSPA5P11021 654 aaKnown RBP13.02□□□□□ -0.33
PKM-211ENST00000564276 IL2RBP14784 551 aa13.02□□□□□ -0.33
PKM-211ENST00000564276 PRIM1P49642 420 aaKnown RBP13.02□□□□□ -0.33
PKM-211ENST00000564276 DDX10Q13206 875 aaKnown RBP13.02□□□□□ -0.33
PKM-211ENST00000564276 PRDM10Q9NQV6 1147 aa13.02□□□□□ -0.33
PKM-211ENST00000564276 NSD2O96028 1365 aa13.02□□□□□ -0.33
PKM-211ENST00000564276 C10orf71Q711Q0 1435 aa13.02□□□□□ -0.33
PKM-211ENST00000564276 TOGARAM1Q9Y4F4 1720 aa13.02□□□□□ -0.33
PKM-211ENST00000564276 KIF13BQ9NQT8 1826 aa13.02□□□□□ -0.33
PKM-211ENST00000564276 SBF1O95248 1867 aa13.02□□□□□ -0.33
PKM-211ENST00000564276 BRCA1P38398 1863 aaKnown RBP13.02□□□□□ -0.33
PKM-211ENST00000564276 ABCB7O75027 752 aa13.01□□□□□ -0.33
PKM-211ENST00000564276 ERBB3P21860 1342 aa13.01□□□□□ -0.33
PKM-211ENST00000564276 PXDNLA1KZ92 1463 aa13.01□□□□□ -0.33
PKM-211ENST00000564276 AMIGO3Q86WK7 504 aa13□□□□□ -0.33
PKM-211ENST00000564276 DDX54Q8TDD1 881 aaKnown RBP13□□□□□ -0.33
PKM-211ENST00000564276 NLRP2Q9NX02 1062 aa13□□□□□ -0.33
PKM-211ENST00000564276 UBR3Q6ZT12 1888 aa12.99□□□□□ -0.33
PKM-211ENST00000564276 PLEKHG2Q9H7P9 1386 aa12.99□□□□□ -0.33
PKM-211ENST00000564276 KDM2BQ8NHM5 1336 aa12.99□□□□□ -0.33
PKM-211ENST00000564276 MKRN1Q9UHC7 482 aaKnown RBP12.99□□□□□ -0.33
PKM-211ENST00000564276 ARFGEF1Q9Y6D6 1849 aa12.99□□□□□ -0.33
PKM-211ENST00000564276 POLA2Q14181 598 aa12.98□□□□□ -0.33
PKM-211ENST00000564276 YTHDC1Q96MU7 727 aaKnown RBP12.98□□□□□ -0.33
PKM-211ENST00000564276 NFAT5O94916 1531 aa12.98□□□□□ -0.33
PKM-211ENST00000564276 ANKRD36BQ8N2N9 1353 aa12.97□□□□□ -0.33
PKM-211ENST00000564276 WASHC2AQ641Q2 1341 aa12.97□□□□□ -0.33
PKM-211ENST00000564276 A0A0G2JLW4 131 aa12.97□□□□□ -0.33
PKM-211ENST00000564276 RGS19P49795 217 aa12.97□□□□□ -0.33
PKM-211ENST00000564276 CCDC85CA6NKD9 419 aa12.96□□□□□ -0.33
PKM-211ENST00000564276 LBX1P52954 281 aa12.96□□□□□ -0.33
PKM-211ENST00000564276 C4BP0C0L5 1744 aa12.96□□□□□ -0.34
PKM-211ENST00000564276 USP47Q96K76 1375 aa12.95□□□□□ -0.34
PKM-211ENST00000564276 LTN1O94822 1766 aa12.95□□□□□ -0.34
PKM-211ENST00000564276 CCER2I3L3R5 266 aa12.95□□□□□ -0.34
PKM-211ENST00000564276 PHF14O94880 888 aa12.95□□□□□ -0.34
PKM-211ENST00000564276 CTCFP49711 727 aaPredicted RBP12.95□□□□□ -0.34
PKM-211ENST00000564276 FLAD1Q8NFF5 587 aa12.95□□□□□ -0.34
PKM-211ENST00000564276 FCHSD2O94868 740 aa12.94□□□□□ -0.34
PKM-211ENST00000564276 KCNH5Q8NCM2 988 aa12.94□□□□□ -0.34
PKM-211ENST00000564276 RNF181Q9P0P0 153 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms