RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 PCGF6Q9BYE7 350 aa23.26■■□□□ 1.31
CCNF-203ENST00000564236 NCAPD2Q15021 1401 aa23.25■■□□□ 1.31
CCNF-203ENST00000564236 HSP90AB2PQ58FF8 381 aa23.25■■□□□ 1.31
CCNF-203ENST00000564236 LRRC4BQ9NT99 713 aa23.25■■□□□ 1.31
CCNF-203ENST00000564236 PPP1R1BQ9UD71 204 aaPredicted RBP23.25■■□□□ 1.31
CCNF-203ENST00000564236 RGPD2P0DJD1 1756 aa23.24■■□□□ 1.31
CCNF-203ENST00000564236 SGIP1Q9BQI5 828 aa23.23■■□□□ 1.31
CCNF-203ENST00000564236 MTFR1LQ9H019 292 aa23.23■■□□□ 1.31
CCNF-203ENST00000564236 ANKRD26Q9UPS8 1709 aa23.22■■□□□ 1.31
CCNF-203ENST00000564236 ZBTB7AO95365 584 aa23.22■■□□□ 1.31
CCNF-203ENST00000564236 PRIM1P49642 420 aaKnown RBP23.22■■□□□ 1.31
CCNF-203ENST00000564236 RAPGEF4Q8WZA2 1011 aa23.21■■□□□ 1.31
CCNF-203ENST00000564236 AKT1S1Q96B36 256 aa23.21■■□□□ 1.31
CCNF-203ENST00000564236 DOT1LQ8TEK3 1739 aa23.2■■□□□ 1.3
CCNF-203ENST00000564236 ZNF827Q17R98 1081 aa23.2■■□□□ 1.3
CCNF-203ENST00000564236 EMILIN1Q9Y6C2 1016 aa23.2■■□□□ 1.3
CCNF-203ENST00000564236 USHBP1Q8N6Y0 703 aa23.19■■□□□ 1.3
CCNF-203ENST00000564236 WASHC2AQ641Q2 1341 aa23.18■■□□□ 1.3
CCNF-203ENST00000564236 TATP17735 454 aaPredicted RBP23.18■■□□□ 1.3
CCNF-203ENST00000564236 EIF4G2P78344 907 aaKnown RBP eCLIP23.18■■□□□ 1.3
CCNF-203ENST00000564236 PCDH11XQ9BZA7 1347 aa23.17■■□□□ 1.3
CCNF-203ENST00000564236 PCDH11YQ9BZA8 1340 aa23.17■■□□□ 1.3
CCNF-203ENST00000564236 LY75O60449 1722 aa23.16■■□□□ 1.3
CCNF-203ENST00000564236 QSER1Q2KHR3 1735 aa23.16■■□□□ 1.3
CCNF-203ENST00000564236 ATF5Q9Y2D1 282 aaPredicted RBP23.16■■□□□ 1.3
CCNF-203ENST00000564236 SLC16A10Q8TF71 515 aa23.15■■□□□ 1.3
CCNF-203ENST00000564236 SYTL4Q96C24 671 aaPredicted RBP23.15■■□□□ 1.3
CCNF-203ENST00000564236 MAP3K5Q99683 1374 aa23.14■■□□□ 1.3
CCNF-203ENST00000564236 PLEKHG2Q9H7P9 1386 aa23.14■■□□□ 1.29
CCNF-203ENST00000564236 HSPA5P11021 654 aaKnown RBP23.13■■□□□ 1.29
CCNF-203ENST00000564236 POLKQ9UBT6 870 aa23.13■■□□□ 1.29
CCNF-203ENST00000564236 PKD1L3Q7Z443 1732 aa23.13■■□□□ 1.29
CCNF-203ENST00000564236 CYP27B1O15528 508 aa23.12■■□□□ 1.29
CCNF-203ENST00000564236 PNPLA7Q6ZV29 1317 aa23.11■■□□□ 1.29
CCNF-203ENST00000564236 NKX1-1Q15270 411 aaPredicted RBP23.11■■□□□ 1.29
CCNF-203ENST00000564236 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.11■■□□□ 1.29
CCNF-203ENST00000564236 COL24A1Q17RW2 1714 aa23.11■■□□□ 1.29
CCNF-203ENST00000564236 SYT17Q9BSW7 474 aa23.1■■□□□ 1.29
CCNF-203ENST00000564236 HMGB2P26583 209 aaKnown RBP23.09■■□□□ 1.29
CCNF-203ENST00000564236 CCER1Q8TC90 406 aaPredicted RBP23.09■■□□□ 1.29
CCNF-203ENST00000564236 EYA1Q99502 592 aa23.09■■□□□ 1.29
CCNF-203ENST00000564236 FHDC1Q9C0D6 1143 aaPredicted RBP23.09■■□□□ 1.29
CCNF-203ENST00000564236 CCNL1Q9UK58 526 aaPredicted RBP23.09■■□□□ 1.29
CCNF-203ENST00000564236 DCAF8L1A6NGE4 600 aa23.08■■□□□ 1.29
CCNF-203ENST00000564236 ARXQ96QS3 562 aa23.08■■□□□ 1.29
CCNF-203ENST00000564236 PPM1GO15355 546 aaPredicted RBP23.06■■□□□ 1.28
CCNF-203ENST00000564236 KCNQ4P56696 695 aa23.06■■□□□ 1.28
CCNF-203ENST00000564236 TFCP2L1Q9NZI6 479 aa23.06■■□□□ 1.28
CCNF-203ENST00000564236 UTRNP46939 3433 aa23.06■■□□□ 1.28
CCNF-203ENST00000564236 PANK3Q9H999 370 aa23.05■■□□□ 1.28
CCNF-203ENST00000564236 SPG7Q9UQ90 795 aa23.05■■□□□ 1.28
CCNF-203ENST00000564236 KAT6BQ8WYB5 2073 aa23.05■■□□□ 1.28
CCNF-203ENST00000564236 TOGARAM1Q9Y4F4 1720 aa23.05■■□□□ 1.28
CCNF-203ENST00000564236 PALLDQ8WX93 1383 aa23.04■■□□□ 1.28
CCNF-203ENST00000564236 YY1P25490 414 aa23.04■■□□□ 1.28
CCNF-203ENST00000564236 MAP2P11137 1827 aaKnown RBP23.03■■□□□ 1.28
CCNF-203ENST00000564236 EIF4A2Q14240 407 aaKnown RBP23.03■■□□□ 1.28
CCNF-203ENST00000564236 TUBGCP6Q96RT7 1819 aa23.03■■□□□ 1.28
CCNF-203ENST00000564236 POLR3GLQ9BT43 218 aa23.02■■□□□ 1.28
CCNF-203ENST00000564236 IGSF1Q8N6C5 1336 aa23.02■■□□□ 1.28
CCNF-203ENST00000564236 MPRIPQ6WCQ1 1025 aa23.01■■□□□ 1.27
CCNF-203ENST00000564236 SMARCC1Q92922 1105 aaPredicted RBP23.01■■□□□ 1.27
CCNF-203ENST00000564236 POLD1P28340 1107 aa22.99■■□□□ 1.27
CCNF-203ENST00000564236 PIGBQ92521 554 aa22.99■■□□□ 1.27
CCNF-203ENST00000564236 C5P01031 1676 aa22.99■■□□□ 1.27
CCNF-203ENST00000564236 PHKG2P15735 406 aa22.98■■□□□ 1.27
CCNF-203ENST00000564236 COL23A1Q86Y22 540 aaPredicted RBP22.98■■□□□ 1.27
CCNF-203ENST00000564236 IFNL2Q8IZJ0 200 aa22.98■■□□□ 1.27
CCNF-203ENST00000564236 TNNT2P45379 298 aaPredicted RBP22.96■■□□□ 1.27
CCNF-203ENST00000564236 FLAD1Q8NFF5 587 aa22.96■■□□□ 1.27
CCNF-203ENST00000564236 ITGB4P16144 1822 aa22.96■■□□□ 1.27
CCNF-203ENST00000564236 TAF1LQ8IZX4 1826 aa22.94■■□□□ 1.26
CCNF-203ENST00000564236 C4BP0C0L5 1744 aa22.93■■□□□ 1.26
CCNF-203ENST00000564236 AMER1Q5JTC6 1135 aaPredicted RBP22.92■■□□□ 1.26
CCNF-203ENST00000564236 MORC1Q86VD1 984 aa22.92■■□□□ 1.26
CCNF-203ENST00000564236 TMOD3Q9NYL9 352 aa22.92■■□□□ 1.26
CCNF-203ENST00000564236 KNSTRNQ9Y448 316 aa22.92■■□□□ 1.26
CCNF-203ENST00000564236 LOC102724428A0A0B4J2F2 783 aa22.91■■□□□ 1.26
CCNF-203ENST00000564236 SIK1P57059 783 aa22.91■■□□□ 1.26
CCNF-203ENST00000564236 KDRP35968 1356 aa22.9■■□□□ 1.26
CCNF-203ENST00000564236 KIF7Q2M1P5 1343 aa22.9■■□□□ 1.26
CCNF-203ENST00000564236 ERVV-2B6SEH9 535 aa22.89■■□□□ 1.25
CCNF-203ENST00000564236 HSP90AB1P08238 724 aaKnown RBP22.89■■□□□ 1.25
CCNF-203ENST00000564236 AMOTQ4VCS5 1084 aa22.89■■□□□ 1.25
CCNF-203ENST00000564236 DCAF5Q96JK2 942 aa22.88■■□□□ 1.25
CCNF-203ENST00000564236 ASAP1Q9ULH1 1129 aa22.88■■□□□ 1.25
CCNF-203ENST00000564236 SSFA2P28290 1259 aa22.87■■□□□ 1.25
CCNF-203ENST00000564236 PLEKHO1Q53GL0 409 aaPredicted RBP22.87■■□□□ 1.25
CCNF-203ENST00000564236 AMIGO3Q86WK7 504 aa22.87■■□□□ 1.25
CCNF-203ENST00000564236 AK7Q96M32 723 aa22.87■■□□□ 1.25
CCNF-203ENST00000564236 ATG3Q9NT62 314 aa22.87■■□□□ 1.25
CCNF-203ENST00000564236 PER1O15534 1290 aaPredicted RBP22.86■■□□□ 1.25
CCNF-203ENST00000564236 LINC00116Q8NCU8 138 aa22.86■■□□□ 1.25
CCNF-203ENST00000564236 ZNF831Q5JPB2 1677 aa22.86■■□□□ 1.25
CCNF-203ENST00000564236 GOLGB1Q14789 3259 aaKnown RBP22.85■■□□□ 1.25
CCNF-203ENST00000564236 KDM6AO15550 1401 aaPredicted RBP22.85■■□□□ 1.25
CCNF-203ENST00000564236 MSH5O43196 834 aa22.85■■□□□ 1.25
CCNF-203ENST00000564236 IL13P35225 146 aa22.85■■□□□ 1.25
CCNF-203ENST00000564236 UBR3Q6ZT12 1888 aa22.84■■□□□ 1.25
CCNF-203ENST00000564236 ITPK1Q13572 414 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms