RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 HSP90AB2PQ58FF8 381 aa20.29■□□□□ 0.84
SNX29-203ENST00000564111 PSDA5PKW4 1024 aaPredicted RBP20.29■□□□□ 0.84
SNX29-203ENST00000564111 NBPF6Q5VWK0 638 aa20.29■□□□□ 0.84
SNX29-203ENST00000564111 NBPF4Q96M43 638 aa20.29■□□□□ 0.84
SNX29-203ENST00000564111 EMILIN1Q9Y6C2 1016 aa20.28■□□□□ 0.84
SNX29-203ENST00000564111 FBLN1P23142 703 aa20.27■□□□□ 0.84
SNX29-203ENST00000564111 QSER1Q2KHR3 1735 aa20.27■□□□□ 0.84
SNX29-203ENST00000564111 KIF7Q2M1P5 1343 aa20.27■□□□□ 0.84
SNX29-203ENST00000564111 CASZ1Q86V15 1759 aa20.26■□□□□ 0.83
SNX29-203ENST00000564111 DDX54Q8TDD1 881 aaKnown RBP20.26■□□□□ 0.83
SNX29-203ENST00000564111 PAPPAQ13219 1627 aa20.26■□□□□ 0.83
SNX29-203ENST00000564111 LY75O60449 1722 aa20.25■□□□□ 0.83
SNX29-203ENST00000564111 MORC1Q86VD1 984 aa20.25■□□□□ 0.83
SNX29-203ENST00000564111 STK32BQ9NY57 414 aa20.25■□□□□ 0.83
SNX29-203ENST00000564111 POLKQ9UBT6 870 aa20.25■□□□□ 0.83
SNX29-203ENST00000564111 TXNRD1Q16881 649 aa20.25■□□□□ 0.83
SNX29-203ENST00000564111 PPM1GO15355 546 aaPredicted RBP20.24■□□□□ 0.83
SNX29-203ENST00000564111 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.24■□□□□ 0.83
SNX29-203ENST00000564111 SLC27A3Q5K4L6 730 aa20.23■□□□□ 0.83
SNX29-203ENST00000564111 SPG7Q9UQ90 795 aa20.23■□□□□ 0.83
SNX29-203ENST00000564111 KAT6BQ8WYB5 2073 aa20.23■□□□□ 0.83
SNX29-203ENST00000564111 ACSBG1Q96GR2 724 aa20.23■□□□□ 0.83
SNX29-203ENST00000564111 NPC1L1Q9UHC9 1359 aa20.22■□□□□ 0.83
SNX29-203ENST00000564111 USHBP1Q8N6Y0 703 aa20.21■□□□□ 0.83
SNX29-203ENST00000564111 KCNQ2O43526 872 aa20.2■□□□□ 0.82
SNX29-203ENST00000564111 PTF1AQ7RTS3 328 aa20.18■□□□□ 0.82
SNX29-203ENST00000564111 ITGB4P16144 1822 aa20.18■□□□□ 0.82
SNX29-203ENST00000564111 SPON1Q9HCB6 807 aa20.18■□□□□ 0.82
SNX29-203ENST00000564111 IGSF1Q8N6C5 1336 aa20.18■□□□□ 0.82
SNX29-203ENST00000564111 EIF4A2Q14240 407 aaKnown RBP20.17■□□□□ 0.82
SNX29-203ENST00000564111 EYA1Q99502 592 aa20.17■□□□□ 0.82
SNX29-203ENST00000564111 AMER1Q5JTC6 1135 aaPredicted RBP20.17■□□□□ 0.82
SNX29-203ENST00000564111 TOGARAM1Q9Y4F4 1720 aa20.16■□□□□ 0.82
SNX29-203ENST00000564111 TNNT2P45379 298 aaPredicted RBP20.16■□□□□ 0.82
SNX29-203ENST00000564111 SLC15A2Q16348 729 aa20.16■□□□□ 0.82
SNX29-203ENST00000564111 PROM2Q8N271 834 aa20.16■□□□□ 0.82
SNX29-203ENST00000564111 PRIM1P49642 420 aaKnown RBP20.15■□□□□ 0.82
SNX29-203ENST00000564111 NKX1-1Q15270 411 aaPredicted RBP20.15■□□□□ 0.82
SNX29-203ENST00000564111 SYTL4Q96C24 671 aaPredicted RBP20.15■□□□□ 0.82
SNX29-203ENST00000564111 SMARCC1Q92922 1105 aaPredicted RBP20.14■□□□□ 0.81
SNX29-203ENST00000564111 ANO8Q9HCE9 1232 aaPredicted RBP20.14■□□□□ 0.81
SNX29-203ENST00000564111 HSP90AB1P08238 724 aaKnown RBP20.14■□□□□ 0.81
SNX29-203ENST00000564111 C5P01031 1676 aa20.13■□□□□ 0.81
SNX29-203ENST00000564111 AMOTQ4VCS5 1084 aa20.12■□□□□ 0.81
SNX29-203ENST00000564111 IFNL2Q8IZJ0 200 aa20.12■□□□□ 0.81
SNX29-203ENST00000564111 PLEKHO1Q53GL0 409 aaPredicted RBP20.11■□□□□ 0.81
SNX29-203ENST00000564111 CYP27B1O15528 508 aa20.1■□□□□ 0.81
SNX29-203ENST00000564111 PPP1R1BQ9UD71 204 aaPredicted RBP20.1■□□□□ 0.81
SNX29-203ENST00000564111 TAF1LQ8IZX4 1826 aa20.09■□□□□ 0.81
SNX29-203ENST00000564111 ZNF831Q5JPB2 1677 aa20.09■□□□□ 0.81
SNX29-203ENST00000564111 PER1O15534 1290 aaPredicted RBP20.09■□□□□ 0.81
SNX29-203ENST00000564111 COL24A1Q17RW2 1714 aa20.09■□□□□ 0.81
SNX29-203ENST00000564111 TUBGCP6Q96RT7 1819 aa20.09■□□□□ 0.81
SNX29-203ENST00000564111 SLC16A10Q8TF71 515 aa20.08■□□□□ 0.81
SNX29-203ENST00000564111 KDRP35968 1356 aa20.08■□□□□ 0.81
SNX29-203ENST00000564111 PHKG2P15735 406 aa20.07■□□□□ 0.8
SNX29-203ENST00000564111 MTFR1LQ9H019 292 aa20.07■□□□□ 0.8
SNX29-203ENST00000564111 CCNL1Q9UK58 526 aaPredicted RBP20.07■□□□□ 0.8
SNX29-203ENST00000564111 AKT1S1Q96B36 256 aa20.07■□□□□ 0.8
SNX29-203ENST00000564111 PALLDQ8WX93 1383 aa20.06■□□□□ 0.8
SNX29-203ENST00000564111 TMOD3Q9NYL9 352 aa20.05■□□□□ 0.8
SNX29-203ENST00000564111 ERVV-2B6SEH9 535 aa20.04■□□□□ 0.8
SNX29-203ENST00000564111 IL13P35225 146 aa20.04■□□□□ 0.8
SNX29-203ENST00000564111 FLAD1Q8NFF5 587 aa20.04■□□□□ 0.8
SNX29-203ENST00000564111 LRRC4BQ9NT99 713 aa20.04■□□□□ 0.8
SNX29-203ENST00000564111 DCAF5Q96JK2 942 aa20.03■□□□□ 0.8
SNX29-203ENST00000564111 DCAF8L1A6NGE4 600 aa20.03■□□□□ 0.8
SNX29-203ENST00000564111 C1orf141Q5JVX7 400 aa20.03■□□□□ 0.8
SNX29-203ENST00000564111 MTHFSP49914 203 aa20.02■□□□□ 0.8
SNX29-203ENST00000564111 MPRIPQ6WCQ1 1025 aa20.02■□□□□ 0.8
SNX29-203ENST00000564111 C4BP0C0L5 1744 aa20.02■□□□□ 0.8
SNX29-203ENST00000564111 SCN11AQ9UI33 1791 aa20.02■□□□□ 0.8
SNX29-203ENST00000564111 ZNF827Q17R98 1081 aa20.02■□□□□ 0.79
SNX29-203ENST00000564111 CC2D1BQ5T0F9 858 aaKnown RBP20.02■□□□□ 0.79
SNX29-203ENST00000564111 ZNF530Q6P9A1 599 aaPredicted RBP20.02■□□□□ 0.79
SNX29-203ENST00000564111 DIAPH1O60610 1272 aaKnown RBP20.01■□□□□ 0.79
SNX29-203ENST00000564111 CFAP53Q96M91 514 aa20■□□□□ 0.79
SNX29-203ENST00000564111 TFCP2L1Q9NZI6 479 aa20■□□□□ 0.79
SNX29-203ENST00000564111 SULT6B1Q6IMI4 303 aa20■□□□□ 0.79
SNX29-203ENST00000564111 COL3A1P02461 1466 aaPredicted RBP20■□□□□ 0.79
SNX29-203ENST00000564111 CICQ96RK0 1608 aaPredicted RBP19.99■□□□□ 0.79
SNX29-203ENST00000564111 MAP3K5Q99683 1374 aa19.99■□□□□ 0.79
SNX29-203ENST00000564111 PIGBQ92521 554 aa19.99■□□□□ 0.79
SNX29-203ENST00000564111 ZBTB7AO95365 584 aa19.98■□□□□ 0.79
SNX29-203ENST00000564111 VIRMAQ69YN4 1812 aaKnown RBP19.98■□□□□ 0.79
SNX29-203ENST00000564111 POLD1P28340 1107 aa19.98■□□□□ 0.79
SNX29-203ENST00000564111 PNPLA7Q6ZV29 1317 aa19.97■□□□□ 0.79
SNX29-203ENST00000564111 UBR3Q6ZT12 1888 aa19.97■□□□□ 0.79
SNX29-203ENST00000564111 ADAMTS7Q9UKP4 1686 aa19.96■□□□□ 0.79
SNX29-203ENST00000564111 PTGER2P43116 358 aa19.95■□□□□ 0.78
SNX29-203ENST00000564111 AKAP4Q5JQC9 854 aa19.95■□□□□ 0.78
SNX29-203ENST00000564111 MRC1P22897 1456 aa19.95■□□□□ 0.78
SNX29-203ENST00000564111 KDM6AO15550 1401 aaPredicted RBP19.95■□□□□ 0.78
SNX29-203ENST00000564111 AK7Q96M32 723 aa19.95■□□□□ 0.78
SNX29-203ENST00000564111 AEBP1Q8IUX7 1158 aa19.94■□□□□ 0.78
SNX29-203ENST00000564111 ATF5Q9Y2D1 282 aaPredicted RBP19.94■□□□□ 0.78
SNX29-203ENST00000564111 COL5A3P25940 1745 aaPredicted RBP19.94■□□□□ 0.78
SNX29-203ENST00000564111 LOC102724428A0A0B4J2F2 783 aa19.94■□□□□ 0.78
SNX29-203ENST00000564111 SIK1P57059 783 aa19.94■□□□□ 0.78
SNX29-203ENST00000564111 CABP4P57796 275 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms