RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 CAMKK2Q96RR4 588 aa27.55■■■□□ 2
CMTM3-206ENST00000563672 IGSF1Q8N6C5 1336 aa27.53■■■□□ 2
CMTM3-206ENST00000563672 CNGB1Q14028 1251 aaPredicted RBP27.53■■■□□ 2
CMTM3-206ENST00000563672 EZH2Q15910 746 aaKnown RBP27.52■■■□□ 2
CMTM3-206ENST00000563672 SBF2Q86WG5 1849 aa27.52■■■□□ 2
CMTM3-206ENST00000563672 KCNQ2O43526 872 aa27.5■■□□□ 1.99
CMTM3-206ENST00000563672 IL13P35225 146 aa27.5■■□□□ 1.99
CMTM3-206ENST00000563672 PARD3Q8TEW0 1356 aa27.49■■□□□ 1.99
CMTM3-206ENST00000563672 ACSBG1Q96GR2 724 aa27.49■■□□□ 1.99
CMTM3-206ENST00000563672 PLSCR1O15162 318 aa27.48■■□□□ 1.99
CMTM3-206ENST00000563672 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.47■■□□□ 1.99
CMTM3-206ENST00000563672 SHANK3Q9BYB0 1731 aa27.47■■□□□ 1.99
CMTM3-206ENST00000563672 PCDH11XQ9BZA7 1347 aa27.45■■□□□ 1.99
CMTM3-206ENST00000563672 PCDH11YQ9BZA8 1340 aa27.45■■□□□ 1.99
CMTM3-206ENST00000563672 CYP27B1O15528 508 aa27.45■■□□□ 1.98
CMTM3-206ENST00000563672 PLEKHG2Q9H7P9 1386 aa27.44■■□□□ 1.98
CMTM3-206ENST00000563672 SPG7Q9UQ90 795 aa27.43■■□□□ 1.98
CMTM3-206ENST00000563672 NHSQ6T4R5 1651 aa27.43■■□□□ 1.98
CMTM3-206ENST00000563672 AEBP1Q8IUX7 1158 aa27.41■■□□□ 1.98
CMTM3-206ENST00000563672 PKD1L3Q7Z443 1732 aa27.41■■□□□ 1.98
CMTM3-206ENST00000563672 KDRP35968 1356 aa27.4■■□□□ 1.98
CMTM3-206ENST00000563672 DIAPH1O60610 1272 aaKnown RBP27.4■■□□□ 1.98
CMTM3-206ENST00000563672 PRIM1P49642 420 aaKnown RBP27.4■■□□□ 1.98
CMTM3-206ENST00000563672 DDX10Q13206 875 aaKnown RBP27.4■■□□□ 1.98
CMTM3-206ENST00000563672 SULT6B1Q6IMI4 303 aa27.4■■□□□ 1.98
CMTM3-206ENST00000563672 PPP2R1AP30153 589 aa27.39■■□□□ 1.98
CMTM3-206ENST00000563672 PROM2Q8N271 834 aa27.39■■□□□ 1.98
CMTM3-206ENST00000563672 NKX1-1Q15270 411 aaPredicted RBP27.38■■□□□ 1.97
CMTM3-206ENST00000563672 COL3A1P02461 1466 aaPredicted RBP27.38■■□□□ 1.97
CMTM3-206ENST00000563672 RGPD3A6NKT7 1758 aaPredicted RBP27.36■■□□□ 1.97
CMTM3-206ENST00000563672 RGPD4Q7Z3J3 1758 aa27.36■■□□□ 1.97
CMTM3-206ENST00000563672 RREB1Q92766 1687 aa27.36■■□□□ 1.97
CMTM3-206ENST00000563672 PLEKHO1Q53GL0 409 aaPredicted RBP27.35■■□□□ 1.97
CMTM3-206ENST00000563672 SYTL4Q96C24 671 aaPredicted RBP27.35■■□□□ 1.97
CMTM3-206ENST00000563672 PHKG2P15735 406 aa27.34■■□□□ 1.97
CMTM3-206ENST00000563672 IFNL2Q8IZJ0 200 aa27.34■■□□□ 1.97
CMTM3-206ENST00000563672 TXNRD1Q16881 649 aa27.33■■□□□ 1.97
CMTM3-206ENST00000563672 AMOTQ4VCS5 1084 aa27.33■■□□□ 1.97
CMTM3-206ENST00000563672 DOT1LQ8TEK3 1739 aa27.32■■□□□ 1.96
CMTM3-206ENST00000563672 KAT6BQ8WYB5 2073 aa27.31■■□□□ 1.96
CMTM3-206ENST00000563672 CFAP53Q96M91 514 aa27.31■■□□□ 1.96
CMTM3-206ENST00000563672 BTAF1O14981 1849 aa27.31■■□□□ 1.96
CMTM3-206ENST00000563672 HMOX1P09601 288 aa27.3■■□□□ 1.96
CMTM3-206ENST00000563672 NUP188Q5SRE5 1749 aa27.3■■□□□ 1.96
CMTM3-206ENST00000563672 PSDA5PKW4 1024 aaPredicted RBP27.29■■□□□ 1.96
CMTM3-206ENST00000563672 NBPF14Q5TI25 921 aa27.29■■□□□ 1.96
CMTM3-206ENST00000563672 R3HDM1Q15032 1099 aaKnown RBP27.28■■□□□ 1.96
CMTM3-206ENST00000563672 ZNF530Q6P9A1 599 aaPredicted RBP27.27■■□□□ 1.96
CMTM3-206ENST00000563672 U2SURPO15042 1029 aaKnown RBP27.26■■□□□ 1.95
CMTM3-206ENST00000563672 RALBP1Q15311 655 aa27.25■■□□□ 1.95
CMTM3-206ENST00000563672 MPRIPQ6WCQ1 1025 aa27.25■■□□□ 1.95
CMTM3-206ENST00000563672 HSP90AB1P08238 724 aaKnown RBP27.24■■□□□ 1.95
CMTM3-206ENST00000563672 ANO8Q9HCE9 1232 aaPredicted RBP27.24■■□□□ 1.95
CMTM3-206ENST00000563672 TOGARAM1Q9Y4F4 1720 aa27.24■■□□□ 1.95
CMTM3-206ENST00000563672 SLC27A3Q5K4L6 730 aa27.23■■□□□ 1.95
CMTM3-206ENST00000563672 PIGBQ92521 554 aa27.23■■□□□ 1.95
CMTM3-206ENST00000563672 DCAF5Q96JK2 942 aa27.23■■□□□ 1.95
CMTM3-206ENST00000563672 LRRC4BQ9NT99 713 aa27.23■■□□□ 1.95
CMTM3-206ENST00000563672 NUDCQ9Y266 331 aa27.23■■□□□ 1.95
CMTM3-206ENST00000563672 C1orf141Q5JVX7 400 aa27.21■■□□□ 1.95
CMTM3-206ENST00000563672 ZNF316A6NFI3 1004 aaPredicted RBP27.2■■□□□ 1.94
CMTM3-206ENST00000563672 ERVV-2B6SEH9 535 aa27.2■■□□□ 1.94
CMTM3-206ENST00000563672 TMOD3Q9NYL9 352 aa27.19■■□□□ 1.94
CMTM3-206ENST00000563672 KDM6AO15550 1401 aaPredicted RBP27.18■■□□□ 1.94
CMTM3-206ENST00000563672 SRCAPQ6ZRS2 3230 aa27.18■■□□□ 1.94
CMTM3-206ENST00000563672 MTHFSDQ2M296 383 aaKnown RBP27.18■■□□□ 1.94
CMTM3-206ENST00000563672 AKAP4Q5JQC9 854 aa27.18■■□□□ 1.94
CMTM3-206ENST00000563672 SMARCC1Q92922 1105 aaPredicted RBP27.17■■□□□ 1.94
CMTM3-206ENST00000563672 ITGB4P16144 1822 aa27.16■■□□□ 1.94
CMTM3-206ENST00000563672 SLC15A2Q16348 729 aa27.16■■□□□ 1.94
CMTM3-206ENST00000563672 RSPH6AQ9H0K4 717 aa27.16■■□□□ 1.94
CMTM3-206ENST00000563672 STK32BQ9NY57 414 aa27.16■■□□□ 1.94
CMTM3-206ENST00000563672 PALLDQ8WX93 1383 aa27.15■■□□□ 1.94
CMTM3-206ENST00000563672 U2AF1L5P0DN76 240 aaPredicted RBP27.15■■□□□ 1.94
CMTM3-206ENST00000563672 KCNQ4P56696 695 aa27.15■■□□□ 1.94
CMTM3-206ENST00000563672 U2AF1Q01081 240 aaKnown RBP eCLIP27.15■■□□□ 1.94
CMTM3-206ENST00000563672 LY75O60449 1722 aa27.14■■□□□ 1.94
CMTM3-206ENST00000563672 CCNL1Q9UK58 526 aaPredicted RBP27.14■■□□□ 1.94
CMTM3-206ENST00000563672 PAPPAQ13219 1627 aa27.14■■□□□ 1.94
CMTM3-206ENST00000563672 FCHSD2O94868 740 aa27.13■■□□□ 1.93
CMTM3-206ENST00000563672 PRKAR2BP31323 418 aa27.13■■□□□ 1.93
CMTM3-206ENST00000563672 ASAP1Q9ULH1 1129 aa27.12■■□□□ 1.93
CMTM3-206ENST00000563672 MYBBP1AQ9BQG0 1328 aaKnown RBP27.12■■□□□ 1.93
CMTM3-206ENST00000563672 CABP4P57796 275 aa27.11■■□□□ 1.93
CMTM3-206ENST00000563672 AKT1S1Q96B36 256 aa27.11■■□□□ 1.93
CMTM3-206ENST00000563672 PHACTR3Q96KR7 559 aa27.11■■□□□ 1.93
CMTM3-206ENST00000563672 ATG3Q9NT62 314 aa27.11■■□□□ 1.93
CMTM3-206ENST00000563672 ZNF827Q17R98 1081 aa27.1■■□□□ 1.93
CMTM3-206ENST00000563672 GAS2L2Q8NHY3 880 aa27.1■■□□□ 1.93
CMTM3-206ENST00000563672 PRKRIP1Q9H875 184 aaPredicted RBP27.1■■□□□ 1.93
CMTM3-206ENST00000563672 LGR6Q9HBX8 967 aa27.1■■□□□ 1.93
CMTM3-206ENST00000563672 RNMTO43148 476 aaKnown RBP27.09■■□□□ 1.93
CMTM3-206ENST00000563672 NFATC2IPQ8NCF5 419 aa27.08■■□□□ 1.93
CMTM3-206ENST00000563672 LOC102724428A0A0B4J2F2 783 aa27.06■■□□□ 1.92
CMTM3-206ENST00000563672 SIK1P57059 783 aa27.06■■□□□ 1.92
CMTM3-206ENST00000563672 PDGFDQ9GZP0 370 aaPredicted RBP27.06■■□□□ 1.92
CMTM3-206ENST00000563672 SLC52A2Q9HAB3 445 aa27.05■■□□□ 1.92
CMTM3-206ENST00000563672 GNAT3A8MTJ3 354 aa27.04■■□□□ 1.92
CMTM3-206ENST00000563672 HMGB2P26583 209 aaKnown RBP27.04■■□□□ 1.92
CMTM3-206ENST00000563672 MAP3K5Q99683 1374 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms