RNA–Protein interactions for RNA: ENST00000563670.1

HERC2-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene HERC2, Length 618 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-203ENST00000563670 C10orf71Q711Q0 1435 aa11.88□□□□□ -0.51
HERC2-203ENST00000563670 SLC24A1O60721 1099 aa11.88□□□□□ -0.51
HERC2-203ENST00000563670 ABHD8Q96I13 439 aa11.88□□□□□ -0.51
HERC2-203ENST00000563670 VASPP50552 380 aaPredicted RBP11.87□□□□□ -0.51
HERC2-203ENST00000563670 CDCA7Q9BWT1 371 aaPredicted RBP11.87□□□□□ -0.51
HERC2-203ENST00000563670 LRRC4BQ9NT99 713 aa11.87□□□□□ -0.51
HERC2-203ENST00000563670 NHSQ6T4R5 1651 aa11.87□□□□□ -0.51
HERC2-203ENST00000563670 WASLO00401 505 aaPredicted RBP11.86□□□□□ -0.51
HERC2-203ENST00000563670 PAK3O75914 559 aaPredicted RBP11.86□□□□□ -0.51
HERC2-203ENST00000563670 USP47Q96K76 1375 aa11.86□□□□□ -0.51
HERC2-203ENST00000563670 AKAP12Q02952 1782 aa11.86□□□□□ -0.51
HERC2-203ENST00000563670 ITSN1Q15811 1721 aa11.86□□□□□ -0.51
HERC2-203ENST00000563670 EVC2Q86UK5 1308 aa11.86□□□□□ -0.51
HERC2-203ENST00000563670 ST20-MTHFSA0A0A6YYL1 179 aa11.85□□□□□ -0.51
HERC2-203ENST00000563670 EIF4G2P78344 907 aaKnown RBP eCLIP11.85□□□□□ -0.51
HERC2-203ENST00000563670 SRPK2P78362 688 aaKnown RBP11.85□□□□□ -0.51
HERC2-203ENST00000563670 CDK19Q9BWU1 502 aa11.85□□□□□ -0.51
HERC2-203ENST00000563670 SLC27A3Q5K4L6 730 aa11.84□□□□□ -0.51
HERC2-203ENST00000563670 FOXN1O15353 648 aa11.83□□□□□ -0.52
HERC2-203ENST00000563670 SMC1BQ8NDV3 1235 aa11.83□□□□□ -0.52
HERC2-203ENST00000563670 TFCP2L1Q9NZI6 479 aa11.83□□□□□ -0.52
HERC2-203ENST00000563670 PXDNLA1KZ92 1463 aa11.83□□□□□ -0.52
HERC2-203ENST00000563670 IGSF1Q8N6C5 1336 aa11.82□□□□□ -0.52
HERC2-203ENST00000563670 WNK3Q9BYP7 1800 aa11.81□□□□□ -0.52
HERC2-203ENST00000563670 SBNO2Q9Y2G9 1366 aa11.81□□□□□ -0.52
HERC2-203ENST00000563670 TMF1P82094 1093 aa11.81□□□□□ -0.52
HERC2-203ENST00000563670 NGDNQ8NEJ9 315 aaKnown RBP11.81□□□□□ -0.52
HERC2-203ENST00000563670 NUDT16Q96DE0 195 aaKnown RBP11.81□□□□□ -0.52
HERC2-203ENST00000563670 SPDYE2BA6NHP3 402 aa11.8□□□□□ -0.52
HERC2-203ENST00000563670 SPDYE6P0CI01 402 aa11.8□□□□□ -0.52
HERC2-203ENST00000563670 HSPA5P11021 654 aaKnown RBP11.8□□□□□ -0.52
HERC2-203ENST00000563670 CTCFP49711 727 aaPredicted RBP11.8□□□□□ -0.52
HERC2-203ENST00000563670 SPDYE2Q495Y8 402 aa11.8□□□□□ -0.52
HERC2-203ENST00000563670 CDCA8Q53HL2 280 aa11.8□□□□□ -0.52
HERC2-203ENST00000563670 ZNF692Q9BU19 519 aaPredicted RBP11.8□□□□□ -0.52
HERC2-203ENST00000563670 CABP2Q9NPB3 220 aa11.8□□□□□ -0.52
HERC2-203ENST00000563670 TUBGCP6Q96RT7 1819 aa11.8□□□□□ -0.52
HERC2-203ENST00000563670 PRR36Q9H6K5 1346 aa11.8□□□□□ -0.52
HERC2-203ENST00000563670 USP6P35125 1406 aa11.79□□□□□ -0.52
HERC2-203ENST00000563670 CCDC61Q9Y6R9 512 aa11.79□□□□□ -0.52
HERC2-203ENST00000563670 PLEKHG2Q9H7P9 1386 aa11.79□□□□□ -0.52
HERC2-203ENST00000563670 TNRC18O15417 2968 aaPredicted RBP11.78□□□□□ -0.52
HERC2-203ENST00000563670 TOM1L2Q6ZVM7 507 aa11.77□□□□□ -0.53
HERC2-203ENST00000563670 TMC1Q8TDI8 760 aa11.77□□□□□ -0.53
HERC2-203ENST00000563670 KDM2BQ8NHM5 1336 aa11.77□□□□□ -0.53
HERC2-203ENST00000563670 BTAF1O14981 1849 aa11.76□□□□□ -0.53
HERC2-203ENST00000563670 EXOC5O00471 708 aa11.76□□□□□ -0.53
HERC2-203ENST00000563670 NUTM2GQ5VZR2 741 aa11.76□□□□□ -0.53
HERC2-203ENST00000563670 COL23A1Q86Y22 540 aaPredicted RBP11.76□□□□□ -0.53
HERC2-203ENST00000563670 PUS7Q96PZ0 661 aaKnown RBP11.76□□□□□ -0.53
HERC2-203ENST00000563670 TESK2Q96S53 571 aa11.76□□□□□ -0.53
HERC2-203ENST00000563670 POLR3GLQ9BT43 218 aa11.76□□□□□ -0.53
HERC2-203ENST00000563670 PPIP5K1Q6PFW1 1433 aa11.76□□□□□ -0.53
HERC2-203ENST00000563670 CCDC85CA6NKD9 419 aa11.75□□□□□ -0.53
HERC2-203ENST00000563670 WDR17Q8IZU2 1322 aa11.75□□□□□ -0.53
HERC2-203ENST00000563670 PLEKHG3A1L390 1219 aa11.74□□□□□ -0.53
HERC2-203ENST00000563670 GCP02774 474 aa11.74□□□□□ -0.53
HERC2-203ENST00000563670 MSL1Q68DK7 614 aa11.74□□□□□ -0.53
HERC2-203ENST00000563670 ACSBG1Q96GR2 724 aa11.74□□□□□ -0.53
HERC2-203ENST00000563670 CABP1Q9NZU7 370 aa11.74□□□□□ -0.53
HERC2-203ENST00000563670 ABCC6O95255 1503 aa11.74□□□□□ -0.53
HERC2-203ENST00000563670 KCPQ6ZWJ8 1503 aa11.73□□□□□ -0.53
HERC2-203ENST00000563670 AIDAQ96BJ3 306 aa11.73□□□□□ -0.53
HERC2-203ENST00000563670 TNRC6CQ9HCJ0 1690 aaKnown RBP11.73□□□□□ -0.53
HERC2-203ENST00000563670 ACEP12821 1306 aa11.72□□□□□ -0.53
HERC2-203ENST00000563670 LBX1P52954 281 aa11.72□□□□□ -0.53
HERC2-203ENST00000563670 HDGFL2Q7Z4V5 671 aaPredicted RBP11.72□□□□□ -0.53
HERC2-203ENST00000563670 CARD10Q9BWT7 1032 aa11.72□□□□□ -0.53
HERC2-203ENST00000563670 RRAGCQ9HB90 399 aa11.72□□□□□ -0.53
HERC2-203ENST00000563670 PIK3C2AO00443 1686 aa11.71□□□□□ -0.53
HERC2-203ENST00000563670 TERF2IPQ9NYB0 399 aa11.71□□□□□ -0.53
HERC2-203ENST00000563670 SSUH2Q9Y2M2 353 aa11.71□□□□□ -0.53
HERC2-203ENST00000563670 POLR3AO14802 1390 aaPredicted RBP11.7□□□□□ -0.54
HERC2-203ENST00000563670 IFNLR1Q8IU57 520 aaPredicted RBP11.7□□□□□ -0.54
HERC2-203ENST00000563670 SLC12A5Q9H2X9 1139 aa11.7□□□□□ -0.54
HERC2-203ENST00000563670 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
HERC2-203ENST00000563670 PRPF38BQ5VTL8 546 aaKnown RBP11.69□□□□□ -0.54
HERC2-203ENST00000563670 ABTB2Q8N961 1025 aa11.69□□□□□ -0.54
HERC2-203ENST00000563670 WBP1LQ9NX94 342 aa11.69□□□□□ -0.54
HERC2-203ENST00000563670 KTN1Q86UP2 1357 aaKnown RBP11.68□□□□□ -0.54
HERC2-203ENST00000563670 PDE4DIPQ5VU43 2346 aa11.68□□□□□ -0.54
HERC2-203ENST00000563670 C9orf131Q5VYM1 1079 aa11.68□□□□□ -0.54
HERC2-203ENST00000563670 NLRP13Q86W25 1043 aa11.68□□□□□ -0.54
HERC2-203ENST00000563670 MKRN1Q9UHC7 482 aaKnown RBP11.68□□□□□ -0.54
HERC2-203ENST00000563670 MON2Q7Z3U7 1717 aa11.68□□□□□ -0.54
HERC2-203ENST00000563670 CNTNAP1P78357 1384 aa11.67□□□□□ -0.54
HERC2-203ENST00000563670 CCDC7Q96M83 1385 aa11.67□□□□□ -0.54
HERC2-203ENST00000563670 HSPA8P11142 646 aaKnown RBP11.67□□□□□ -0.54
HERC2-203ENST00000563670 KCNQ4P56696 695 aa11.67□□□□□ -0.54
HERC2-203ENST00000563670 ARHGAP27Q6ZUM4 889 aa11.67□□□□□ -0.54
HERC2-203ENST00000563670 COL18A1P39060 1754 aa11.67□□□□□ -0.54
HERC2-203ENST00000563670 PKD1L3Q7Z443 1732 aa11.66□□□□□ -0.54
HERC2-203ENST00000563670 FLAD1Q8NFF5 587 aa11.66□□□□□ -0.54
HERC2-203ENST00000563670 AXIN2Q9Y2T1 843 aa11.66□□□□□ -0.54
HERC2-203ENST00000563670 KIF7Q2M1P5 1343 aa11.64□□□□□ -0.55
HERC2-203ENST00000563670 TTC21AQ8NDW8 1320 aa11.64□□□□□ -0.55
HERC2-203ENST00000563670 LY75O60449 1722 aa11.64□□□□□ -0.55
HERC2-203ENST00000563670 BCS1LQ9Y276 419 aa11.64□□□□□ -0.55
HERC2-203ENST00000563670 SLIT3O75094 1523 aa11.64□□□□□ -0.55
HERC2-203ENST00000563670 A0A1W2PP64 1363 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms