RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 PARD3Q8TEW0 1356 aa21.26■□□□□ 0.99
AC009088.3-201ENST00000563605 PER1O15534 1290 aaPredicted RBP21.26■□□□□ 0.99
AC009088.3-201ENST00000563605 EIF4A2Q14240 407 aaKnown RBP21.26■□□□□ 0.99
AC009088.3-201ENST00000563605 NBPF14Q5TI25 921 aa21.26■□□□□ 0.99
AC009088.3-201ENST00000563605 SYTL4Q96C24 671 aaPredicted RBP21.26■□□□□ 0.99
AC009088.3-201ENST00000563605 MAP2P11137 1827 aaKnown RBP21.25■□□□□ 0.99
AC009088.3-201ENST00000563605 PROM2Q8N271 834 aa21.24■□□□□ 0.99
AC009088.3-201ENST00000563605 SBF2Q86WG5 1849 aa21.23■□□□□ 0.99
AC009088.3-201ENST00000563605 PRIM1P49642 420 aaKnown RBP21.23■□□□□ 0.99
AC009088.3-201ENST00000563605 TXNRD1Q16881 649 aa21.22■□□□□ 0.99
AC009088.3-201ENST00000563605 ANKRD26Q9UPS8 1709 aa21.21■□□□□ 0.99
AC009088.3-201ENST00000563605 KAT6BQ8WYB5 2073 aa21.21■□□□□ 0.99
AC009088.3-201ENST00000563605 MTHFSP49914 203 aa21.18■□□□□ 0.98
AC009088.3-201ENST00000563605 SPG7Q9UQ90 795 aa21.18■□□□□ 0.98
AC009088.3-201ENST00000563605 PCDH11XQ9BZA7 1347 aa21.18■□□□□ 0.98
AC009088.3-201ENST00000563605 PCDH11YQ9BZA8 1340 aa21.18■□□□□ 0.98
AC009088.3-201ENST00000563605 CYP27B1O15528 508 aa21.17■□□□□ 0.98
AC009088.3-201ENST00000563605 ANO8Q9HCE9 1232 aaPredicted RBP21.15■□□□□ 0.98
AC009088.3-201ENST00000563605 NHSQ6T4R5 1651 aa21.14■□□□□ 0.97
AC009088.3-201ENST00000563605 IGSF1Q8N6C5 1336 aa21.13■□□□□ 0.97
AC009088.3-201ENST00000563605 RREB1Q92766 1687 aa21.13■□□□□ 0.97
AC009088.3-201ENST00000563605 MPRIPQ6WCQ1 1025 aa21.13■□□□□ 0.97
AC009088.3-201ENST00000563605 AEBP1Q8IUX7 1158 aa21.13■□□□□ 0.97
AC009088.3-201ENST00000563605 STK32BQ9NY57 414 aa21.13■□□□□ 0.97
AC009088.3-201ENST00000563605 NUP188Q5SRE5 1749 aa21.12■□□□□ 0.97
AC009088.3-201ENST00000563605 IL13P35225 146 aa21.12■□□□□ 0.97
AC009088.3-201ENST00000563605 KCNQ4P56696 695 aa21.12■□□□□ 0.97
AC009088.3-201ENST00000563605 SULT6B1Q6IMI4 303 aa21.12■□□□□ 0.97
AC009088.3-201ENST00000563605 NCAPD2Q15021 1401 aa21.12■□□□□ 0.97
AC009088.3-201ENST00000563605 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.11■□□□□ 0.97
AC009088.3-201ENST00000563605 SHANK3Q9BYB0 1731 aa21.1■□□□□ 0.97
AC009088.3-201ENST00000563605 IFNL2Q8IZJ0 200 aa21.1■□□□□ 0.97
AC009088.3-201ENST00000563605 LRRC4BQ9NT99 713 aa21.1■□□□□ 0.97
AC009088.3-201ENST00000563605 BTAF1O14981 1849 aa21.09■□□□□ 0.97
AC009088.3-201ENST00000563605 PLEKHO1Q53GL0 409 aaPredicted RBP21.09■□□□□ 0.97
AC009088.3-201ENST00000563605 NPC1L1Q9UHC9 1359 aa21.09■□□□□ 0.97
AC009088.3-201ENST00000563605 PHKG2P15735 406 aa21.08■□□□□ 0.97
AC009088.3-201ENST00000563605 SLC15A2Q16348 729 aa21.08■□□□□ 0.97
AC009088.3-201ENST00000563605 PDGFDQ9GZP0 370 aaPredicted RBP21.08■□□□□ 0.97
AC009088.3-201ENST00000563605 DIAPH1O60610 1272 aaKnown RBP21.07■□□□□ 0.96
AC009088.3-201ENST00000563605 NKX1-1Q15270 411 aaPredicted RBP21.07■□□□□ 0.96
AC009088.3-201ENST00000563605 DOT1LQ8TEK3 1739 aa21.07■□□□□ 0.96
AC009088.3-201ENST00000563605 RGPD3A6NKT7 1758 aaPredicted RBP21.06■□□□□ 0.96
AC009088.3-201ENST00000563605 RGPD4Q7Z3J3 1758 aa21.06■□□□□ 0.96
AC009088.3-201ENST00000563605 SRCAPQ6ZRS2 3230 aa21.06■□□□□ 0.96
AC009088.3-201ENST00000563605 HMOX1P09601 288 aa21.06■□□□□ 0.96
AC009088.3-201ENST00000563605 SLC27A3Q5K4L6 730 aa21.05■□□□□ 0.96
AC009088.3-201ENST00000563605 ZNF530Q6P9A1 599 aaPredicted RBP21.05■□□□□ 0.96
AC009088.3-201ENST00000563605 PIGBQ92521 554 aa21.05■□□□□ 0.96
AC009088.3-201ENST00000563605 CCNL1Q9UK58 526 aaPredicted RBP21.05■□□□□ 0.96
AC009088.3-201ENST00000563605 AMOTQ4VCS5 1084 aa21.04■□□□□ 0.96
AC009088.3-201ENST00000563605 U2SURPO15042 1029 aaKnown RBP21.03■□□□□ 0.96
AC009088.3-201ENST00000563605 ZBTB7AO95365 584 aa21.03■□□□□ 0.96
AC009088.3-201ENST00000563605 ZNF827Q17R98 1081 aa21.03■□□□□ 0.96
AC009088.3-201ENST00000563605 TMOD3Q9NYL9 352 aa21.03■□□□□ 0.96
AC009088.3-201ENST00000563605 ZEB1P37275 1124 aaPredicted RBP21.02■□□□□ 0.96
AC009088.3-201ENST00000563605 SPON1Q9HCB6 807 aa21.02■□□□□ 0.96
AC009088.3-201ENST00000563605 PKD1L3Q7Z443 1732 aa21.01■□□□□ 0.95
AC009088.3-201ENST00000563605 C1orf141Q5JVX7 400 aa21.01■□□□□ 0.95
AC009088.3-201ENST00000563605 ATF5Q9Y2D1 282 aaPredicted RBP21.01■□□□□ 0.95
AC009088.3-201ENST00000563605 PPP2R1AP30153 589 aa21■□□□□ 0.95
AC009088.3-201ENST00000563605 PALLDQ8WX93 1383 aa20.99■□□□□ 0.95
AC009088.3-201ENST00000563605 HSP90AB1P08238 724 aaKnown RBP20.99■□□□□ 0.95
AC009088.3-201ENST00000563605 SMARCC1Q92922 1105 aaPredicted RBP20.99■□□□□ 0.95
AC009088.3-201ENST00000563605 AKT1S1Q96B36 256 aa20.99■□□□□ 0.95
AC009088.3-201ENST00000563605 CFAP53Q96M91 514 aa20.99■□□□□ 0.95
AC009088.3-201ENST00000563605 TFCP2L1Q9NZI6 479 aa20.99■□□□□ 0.95
AC009088.3-201ENST00000563605 DDX10Q13206 875 aaKnown RBP20.98■□□□□ 0.95
AC009088.3-201ENST00000563605 DCAF5Q96JK2 942 aa20.98■□□□□ 0.95
AC009088.3-201ENST00000563605 PPP1R1BQ9UD71 204 aaPredicted RBP20.98■□□□□ 0.95
AC009088.3-201ENST00000563605 ASAP1Q9ULH1 1129 aa20.98■□□□□ 0.95
AC009088.3-201ENST00000563605 KDRP35968 1356 aa20.97■□□□□ 0.95
AC009088.3-201ENST00000563605 CABP4P57796 275 aa20.96■□□□□ 0.95
AC009088.3-201ENST00000563605 ERVV-2B6SEH9 535 aa20.95■□□□□ 0.94
AC009088.3-201ENST00000563605 MSH5O43196 834 aa20.95■□□□□ 0.94
AC009088.3-201ENST00000563605 ATG3Q9NT62 314 aa20.95■□□□□ 0.94
AC009088.3-201ENST00000563605 LRP5O75197 1615 aa20.95■□□□□ 0.94
AC009088.3-201ENST00000563605 TOGARAM1Q9Y4F4 1720 aa20.95■□□□□ 0.94
AC009088.3-201ENST00000563605 PLEKHG2Q9H7P9 1386 aa20.94■□□□□ 0.94
AC009088.3-201ENST00000563605 MTHFSDQ2M296 383 aaKnown RBP20.93■□□□□ 0.94
AC009088.3-201ENST00000563605 LOC102724428A0A0B4J2F2 783 aa20.92■□□□□ 0.94
AC009088.3-201ENST00000563605 SIK1P57059 783 aa20.92■□□□□ 0.94
AC009088.3-201ENST00000563605 AKAP4Q5JQC9 854 aa20.92■□□□□ 0.94
AC009088.3-201ENST00000563605 NFATC2IPQ8NCF5 419 aa20.92■□□□□ 0.94
AC009088.3-201ENST00000563605 RBM42Q9BTD8 480 aaKnown RBP20.92■□□□□ 0.94
AC009088.3-201ENST00000563605 NUDCQ9Y266 331 aa20.92■□□□□ 0.94
AC009088.3-201ENST00000563605 PNPLA7Q6ZV29 1317 aa20.92■□□□□ 0.94
AC009088.3-201ENST00000563605 ITGB4P16144 1822 aa20.92■□□□□ 0.94
AC009088.3-201ENST00000563605 KDM6AO15550 1401 aaPredicted RBP20.91■□□□□ 0.94
AC009088.3-201ENST00000563605 COL3A1P02461 1466 aaPredicted RBP20.91■□□□□ 0.94
AC009088.3-201ENST00000563605 ATP6V1AP38606 617 aa20.91■□□□□ 0.94
AC009088.3-201ENST00000563605 PAPPAQ13219 1627 aa20.91■□□□□ 0.94
AC009088.3-201ENST00000563605 MTFR1LQ9H019 292 aa20.91■□□□□ 0.94
AC009088.3-201ENST00000563605 LGR6Q9HBX8 967 aa20.91■□□□□ 0.94
AC009088.3-201ENST00000563605 U2AF1L5P0DN76 240 aaPredicted RBP20.9■□□□□ 0.94
AC009088.3-201ENST00000563605 U2AF1Q01081 240 aaKnown RBP eCLIP20.9■□□□□ 0.94
AC009088.3-201ENST00000563605 LY75O60449 1722 aa20.9■□□□□ 0.94
AC009088.3-201ENST00000563605 PTGER2P43116 358 aa20.89■□□□□ 0.93
AC009088.3-201ENST00000563605 ITPK1Q13572 414 aa20.88■□□□□ 0.93
AC009088.3-201ENST00000563605 SMIM5Q71RC9 77 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms