RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 MEGF6O75095 1541 aa26.02■■□□□ 1.76
TRADD-203ENST00000563348 MAP2P11137 1827 aaKnown RBP26.02■■□□□ 1.76
TRADD-203ENST00000563348 NBPF14Q5TI25 921 aa26.01■■□□□ 1.75
TRADD-203ENST00000563348 PROM2Q8N271 834 aa26■■□□□ 1.75
TRADD-203ENST00000563348 EYA1Q99502 592 aa26■■□□□ 1.75
TRADD-203ENST00000563348 ANKRD26Q9UPS8 1709 aa25.99■■□□□ 1.75
TRADD-203ENST00000563348 KAT6BQ8WYB5 2073 aa25.97■■□□□ 1.75
TRADD-203ENST00000563348 EIF4A2Q14240 407 aaKnown RBP25.97■■□□□ 1.75
TRADD-203ENST00000563348 TXNRD1Q16881 649 aa25.95■■□□□ 1.74
TRADD-203ENST00000563348 RREB1Q92766 1687 aa25.95■■□□□ 1.74
TRADD-203ENST00000563348 NCAPD2Q15021 1401 aa25.95■■□□□ 1.74
TRADD-203ENST00000563348 PRIM1P49642 420 aaKnown RBP25.93■■□□□ 1.74
TRADD-203ENST00000563348 NHSQ6T4R5 1651 aa25.92■■□□□ 1.74
TRADD-203ENST00000563348 RGPD3A6NKT7 1758 aaPredicted RBP25.92■■□□□ 1.74
TRADD-203ENST00000563348 RGPD4Q7Z3J3 1758 aa25.92■■□□□ 1.74
TRADD-203ENST00000563348 PCDH11XQ9BZA7 1347 aa25.9■■□□□ 1.74
TRADD-203ENST00000563348 PCDH11YQ9BZA8 1340 aa25.9■■□□□ 1.74
TRADD-203ENST00000563348 NUP188Q5SRE5 1749 aa25.9■■□□□ 1.74
TRADD-203ENST00000563348 CYP27B1O15528 508 aa25.89■■□□□ 1.74
TRADD-203ENST00000563348 CC2D1BQ5T0F9 858 aaKnown RBP25.89■■□□□ 1.74
TRADD-203ENST00000563348 SYTL4Q96C24 671 aaPredicted RBP25.89■■□□□ 1.74
TRADD-203ENST00000563348 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.89■■□□□ 1.74
TRADD-203ENST00000563348 SPG7Q9UQ90 795 aa25.88■■□□□ 1.73
TRADD-203ENST00000563348 IGSF1Q8N6C5 1336 aa25.88■■□□□ 1.73
TRADD-203ENST00000563348 NPC1L1Q9UHC9 1359 aa25.87■■□□□ 1.73
TRADD-203ENST00000563348 ANO8Q9HCE9 1232 aaPredicted RBP25.87■■□□□ 1.73
TRADD-203ENST00000563348 SHANK3Q9BYB0 1731 aa25.86■■□□□ 1.73
TRADD-203ENST00000563348 MTHFSP49914 203 aa25.84■■□□□ 1.73
TRADD-203ENST00000563348 NKX1-1Q15270 411 aaPredicted RBP25.83■■□□□ 1.73
TRADD-203ENST00000563348 BTAF1O14981 1849 aa25.83■■□□□ 1.73
TRADD-203ENST00000563348 IL13P35225 146 aa25.82■■□□□ 1.72
TRADD-203ENST00000563348 STK32BQ9NY57 414 aa25.82■■□□□ 1.72
TRADD-203ENST00000563348 SLC15A2Q16348 729 aa25.81■■□□□ 1.72
TRADD-203ENST00000563348 SLC27A3Q5K4L6 730 aa25.81■■□□□ 1.72
TRADD-203ENST00000563348 LRRC4BQ9NT99 713 aa25.81■■□□□ 1.72
TRADD-203ENST00000563348 PLEKHG2Q9H7P9 1386 aa25.81■■□□□ 1.72
TRADD-203ENST00000563348 IFNL2Q8IZJ0 200 aa25.79■■□□□ 1.72
TRADD-203ENST00000563348 CNGB1Q14028 1251 aaPredicted RBP25.78■■□□□ 1.72
TRADD-203ENST00000563348 PKD1L3Q7Z443 1732 aa25.77■■□□□ 1.72
TRADD-203ENST00000563348 PHKG2P15735 406 aa25.77■■□□□ 1.72
TRADD-203ENST00000563348 PLEKHO1Q53GL0 409 aaPredicted RBP25.77■■□□□ 1.72
TRADD-203ENST00000563348 MPRIPQ6WCQ1 1025 aa25.77■■□□□ 1.72
TRADD-203ENST00000563348 AEBP1Q8IUX7 1158 aa25.77■■□□□ 1.72
TRADD-203ENST00000563348 DOT1LQ8TEK3 1739 aa25.77■■□□□ 1.72
TRADD-203ENST00000563348 SULT6B1Q6IMI4 303 aa25.76■■□□□ 1.71
TRADD-203ENST00000563348 LRP5O75197 1615 aa25.76■■□□□ 1.71
TRADD-203ENST00000563348 AMOTQ4VCS5 1084 aa25.75■■□□□ 1.71
TRADD-203ENST00000563348 PIGBQ92521 554 aa25.73■■□□□ 1.71
TRADD-203ENST00000563348 PDGFDQ9GZP0 370 aaPredicted RBP25.73■■□□□ 1.71
TRADD-203ENST00000563348 SPON1Q9HCB6 807 aa25.73■■□□□ 1.71
TRADD-203ENST00000563348 KDRP35968 1356 aa25.72■■□□□ 1.71
TRADD-203ENST00000563348 DIAPH1O60610 1272 aaKnown RBP25.72■■□□□ 1.71
TRADD-203ENST00000563348 KCNQ4P56696 695 aa25.72■■□□□ 1.71
TRADD-203ENST00000563348 AKT1S1Q96B36 256 aa25.71■■□□□ 1.71
TRADD-203ENST00000563348 CCNL1Q9UK58 526 aaPredicted RBP25.71■■□□□ 1.71
TRADD-203ENST00000563348 ZNF827Q17R98 1081 aa25.7■■□□□ 1.7
TRADD-203ENST00000563348 SMARCC1Q92922 1105 aaPredicted RBP25.7■■□□□ 1.7
TRADD-203ENST00000563348 HSP90AB1P08238 724 aaKnown RBP25.69■■□□□ 1.7
TRADD-203ENST00000563348 ZNF530Q6P9A1 599 aaPredicted RBP25.69■■□□□ 1.7
TRADD-203ENST00000563348 TMOD3Q9NYL9 352 aa25.68■■□□□ 1.7
TRADD-203ENST00000563348 PAPPAQ13219 1627 aa25.67■■□□□ 1.7
TRADD-203ENST00000563348 DCAF5Q96JK2 942 aa25.67■■□□□ 1.7
TRADD-203ENST00000563348 PALLDQ8WX93 1383 aa25.67■■□□□ 1.7
TRADD-203ENST00000563348 ERVV-2B6SEH9 535 aa25.66■■□□□ 1.7
TRADD-203ENST00000563348 ZBTB7AO95365 584 aa25.66■■□□□ 1.7
TRADD-203ENST00000563348 HMOX1P09601 288 aa25.65■■□□□ 1.7
TRADD-203ENST00000563348 HMGB2P26583 209 aaKnown RBP25.65■■□□□ 1.7
TRADD-203ENST00000563348 LY75O60449 1722 aa25.65■■□□□ 1.7
TRADD-203ENST00000563348 TOGARAM1Q9Y4F4 1720 aa25.65■■□□□ 1.7
TRADD-203ENST00000563348 C1orf141Q5JVX7 400 aa25.64■■□□□ 1.7
TRADD-203ENST00000563348 TFCP2L1Q9NZI6 479 aa25.63■■□□□ 1.69
TRADD-203ENST00000563348 CASZ1Q86V15 1759 aa25.63■■□□□ 1.69
TRADD-203ENST00000563348 ITGB4P16144 1822 aa25.63■■□□□ 1.69
TRADD-203ENST00000563348 PPP2R1AP30153 589 aa25.62■■□□□ 1.69
TRADD-203ENST00000563348 MTFR1LQ9H019 292 aa25.62■■□□□ 1.69
TRADD-203ENST00000563348 ASAP1Q9ULH1 1129 aa25.62■■□□□ 1.69
TRADD-203ENST00000563348 ATF5Q9Y2D1 282 aaPredicted RBP25.62■■□□□ 1.69
TRADD-203ENST00000563348 COL3A1P02461 1466 aaPredicted RBP25.6■■□□□ 1.69
TRADD-203ENST00000563348 CFAP53Q96M91 514 aa25.6■■□□□ 1.69
TRADD-203ENST00000563348 ATG3Q9NT62 314 aa25.6■■□□□ 1.69
TRADD-203ENST00000563348 U2SURPO15042 1029 aaKnown RBP25.59■■□□□ 1.69
TRADD-203ENST00000563348 PTGER2P43116 358 aa25.59■■□□□ 1.69
TRADD-203ENST00000563348 PPP1R1BQ9UD71 204 aaPredicted RBP25.59■■□□□ 1.69
TRADD-203ENST00000563348 PNPLA7Q6ZV29 1317 aa25.59■■□□□ 1.69
TRADD-203ENST00000563348 KDM6AO15550 1401 aaPredicted RBP25.58■■□□□ 1.69
TRADD-203ENST00000563348 LOC102724428A0A0B4J2F2 783 aa25.58■■□□□ 1.69
TRADD-203ENST00000563348 SIK1P57059 783 aa25.58■■□□□ 1.69
TRADD-203ENST00000563348 CABP4P57796 275 aa25.58■■□□□ 1.69
TRADD-203ENST00000563348 AKAP4Q5JQC9 854 aa25.58■■□□□ 1.69
TRADD-203ENST00000563348 SLC16A10Q8TF71 515 aa25.58■■□□□ 1.69
TRADD-203ENST00000563348 MTHFSDQ2M296 383 aaKnown RBP25.55■■□□□ 1.68
TRADD-203ENST00000563348 SGIP1Q9BQI5 828 aa25.55■■□□□ 1.68
TRADD-203ENST00000563348 NFATC2IPQ8NCF5 419 aa25.54■■□□□ 1.68
TRADD-203ENST00000563348 NUDCQ9Y266 331 aa25.54■■□□□ 1.68
TRADD-203ENST00000563348 ATP6V1AP38606 617 aa25.52■■□□□ 1.68
TRADD-203ENST00000563348 COL23A1Q86Y22 540 aaPredicted RBP25.52■■□□□ 1.68
TRADD-203ENST00000563348 LGR6Q9HBX8 967 aa25.52■■□□□ 1.68
TRADD-203ENST00000563348 ITPK1Q13572 414 aa25.51■■□□□ 1.67
TRADD-203ENST00000563348 FLAD1Q8NFF5 587 aa25.51■■□□□ 1.67
TRADD-203ENST00000563348 RNMTO43148 476 aaKnown RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms