RNA–Protein interactions for RNA: ENST00000563318.1

FANCA-210, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-210ENST00000563318 LTV1Q96GA3 475 aaPredicted RBP16.86■□□□□ 0.29
FANCA-210ENST00000563318 SBF2Q86WG5 1849 aa16.85■□□□□ 0.29
FANCA-210ENST00000563318 DEFB132Q7Z7B7 95 aa16.84■□□□□ 0.29
FANCA-210ENST00000563318 MORC1Q86VD1 984 aa16.83■□□□□ 0.28
FANCA-210ENST00000563318 PLEKHG2Q9H7P9 1386 aa16.82■□□□□ 0.28
FANCA-210ENST00000563318 EXOC5O00471 708 aa16.82■□□□□ 0.28
FANCA-210ENST00000563318 EIF4A2Q14240 407 aaKnown RBP16.82■□□□□ 0.28
FANCA-210ENST00000563318 TRIM37O94972 964 aa16.81■□□□□ 0.28
FANCA-210ENST00000563318 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
FANCA-210ENST00000563318 USHBP1Q8N6Y0 703 aa16.81■□□□□ 0.28
FANCA-210ENST00000563318 EYA1Q99502 592 aa16.81■□□□□ 0.28
FANCA-210ENST00000563318 RGPD3A6NKT7 1758 aaPredicted RBP16.81■□□□□ 0.28
FANCA-210ENST00000563318 RGPD4Q7Z3J3 1758 aa16.81■□□□□ 0.28
FANCA-210ENST00000563318 PKD1L3Q7Z443 1732 aa16.81■□□□□ 0.28
FANCA-210ENST00000563318 NHSQ6T4R5 1651 aa16.81■□□□□ 0.28
FANCA-210ENST00000563318 COL3A1P02461 1466 aaPredicted RBP16.8■□□□□ 0.28
FANCA-210ENST00000563318 IGSF1Q8N6C5 1336 aa16.8■□□□□ 0.28
FANCA-210ENST00000563318 PTF1AQ7RTS3 328 aa16.8■□□□□ 0.28
FANCA-210ENST00000563318 CAMKK2Q96RR4 588 aa16.8■□□□□ 0.28
FANCA-210ENST00000563318 RREB1Q92766 1687 aa16.8■□□□□ 0.28
FANCA-210ENST00000563318 PARD3Q8TEW0 1356 aa16.78■□□□□ 0.28
FANCA-210ENST00000563318 PPM1GO15355 546 aaPredicted RBP16.78■□□□□ 0.28
FANCA-210ENST00000563318 KDRP35968 1356 aa16.77■□□□□ 0.28
FANCA-210ENST00000563318 BAG6P46379 1132 aa16.77■□□□□ 0.28
FANCA-210ENST00000563318 CC2D1BQ5T0F9 858 aaKnown RBP16.77■□□□□ 0.28
FANCA-210ENST00000563318 BCL11BQ9C0K0 894 aaPredicted RBP16.77■□□□□ 0.28
FANCA-210ENST00000563318 IL13P35225 146 aa16.76■□□□□ 0.27
FANCA-210ENST00000563318 EN1Q05925 392 aaPredicted RBP16.76■□□□□ 0.27
FANCA-210ENST00000563318 ZCRB1Q8TBF4 217 aaKnown RBP16.76■□□□□ 0.27
FANCA-210ENST00000563318 SF3B2Q13435 895 aaKnown RBP16.75■□□□□ 0.27
FANCA-210ENST00000563318 PLSCR1O15162 318 aa16.74■□□□□ 0.27
FANCA-210ENST00000563318 KCNQ2O43526 872 aa16.74■□□□□ 0.27
FANCA-210ENST00000563318 MTHFSP49914 203 aa16.74■□□□□ 0.27
FANCA-210ENST00000563318 RTN4Q9NQC3 1192 aaKnown RBP16.74■□□□□ 0.27
FANCA-210ENST00000563318 NUP188Q5SRE5 1749 aa16.73■□□□□ 0.27
FANCA-210ENST00000563318 CYP27B1O15528 508 aa16.73■□□□□ 0.27
FANCA-210ENST00000563318 APBA3O96018 575 aa16.73■□□□□ 0.27
FANCA-210ENST00000563318 ZEB1P37275 1124 aaPredicted RBP16.73■□□□□ 0.27
FANCA-210ENST00000563318 EZH2Q15910 746 aaKnown RBP16.73■□□□□ 0.27
FANCA-210ENST00000563318 RAPGEF4Q8WZA2 1011 aa16.73■□□□□ 0.27
FANCA-210ENST00000563318 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.73■□□□□ 0.276e-7■■■□□ 16.9
FANCA-210ENST00000563318 TATP17735 454 aaPredicted RBP16.72■□□□□ 0.27
FANCA-210ENST00000563318 PROM2Q8N271 834 aa16.72■□□□□ 0.27
FANCA-210ENST00000563318 DOT1LQ8TEK3 1739 aa16.72■□□□□ 0.27
FANCA-210ENST00000563318 TOGARAM1Q9Y4F4 1720 aa16.72■□□□□ 0.27
FANCA-210ENST00000563318 NKX1-1Q15270 411 aaPredicted RBP16.71■□□□□ 0.27
FANCA-210ENST00000563318 PCDH11XQ9BZA7 1347 aa16.7■□□□□ 0.26
FANCA-210ENST00000563318 PCDH11YQ9BZA8 1340 aa16.7■□□□□ 0.26
FANCA-210ENST00000563318 AEBP1Q8IUX7 1158 aa16.7■□□□□ 0.26
FANCA-210ENST00000563318 DDX54Q8TDD1 881 aaKnown RBP16.7■□□□□ 0.26
FANCA-210ENST00000563318 BTAF1O14981 1849 aa16.7■□□□□ 0.26
FANCA-210ENST00000563318 PAPPAQ13219 1627 aa16.68■□□□□ 0.26
FANCA-210ENST00000563318 ACSBG1Q96GR2 724 aa16.68■□□□□ 0.26
FANCA-210ENST00000563318 PPP2R1AP30153 589 aa16.67■□□□□ 0.26
FANCA-210ENST00000563318 PHKG2P15735 406 aa16.65■□□□□ 0.26
FANCA-210ENST00000563318 PRIM1P49642 420 aaKnown RBP16.64■□□□□ 0.25
FANCA-210ENST00000563318 SPG7Q9UQ90 795 aa16.64■□□□□ 0.25
FANCA-210ENST00000563318 LY75O60449 1722 aa16.64■□□□□ 0.25
FANCA-210ENST00000563318 DIAPH1O60610 1272 aaKnown RBP16.63■□□□□ 0.25
FANCA-210ENST00000563318 TXNRD1Q16881 649 aa16.63■□□□□ 0.25
FANCA-210ENST00000563318 SULT6B1Q6IMI4 303 aa16.63■□□□□ 0.25
FANCA-210ENST00000563318 KDM6AO15550 1401 aaPredicted RBP16.62■□□□□ 0.25
FANCA-210ENST00000563318 ANO8Q9HCE9 1232 aaPredicted RBP16.62■□□□□ 0.25
FANCA-210ENST00000563318 ADAMTS7Q9UKP4 1686 aa16.62■□□□□ 0.25
FANCA-210ENST00000563318 DDX10Q13206 875 aaKnown RBP16.61■□□□□ 0.25
FANCA-210ENST00000563318 IFNL2Q8IZJ0 200 aa16.61■□□□□ 0.25
FANCA-210ENST00000563318 AMOTQ4VCS5 1084 aa16.6■□□□□ 0.25
FANCA-210ENST00000563318 LRRC4BQ9NT99 713 aa16.6■□□□□ 0.25
FANCA-210ENST00000563318 ITGB4P16144 1822 aa16.6■□□□□ 0.25
FANCA-210ENST00000563318 CNGB1Q14028 1251 aaPredicted RBP16.58■□□□□ 0.24
FANCA-210ENST00000563318 PLEKHO1Q53GL0 409 aaPredicted RBP16.58■□□□□ 0.24
FANCA-210ENST00000563318 CASZ1Q86V15 1759 aa16.57■□□□□ 0.24
FANCA-210ENST00000563318 LRP5O75197 1615 aa16.57■□□□□ 0.24
FANCA-210ENST00000563318 MRC1P22897 1456 aa16.57■□□□□ 0.24
FANCA-210ENST00000563318 HMOX1P09601 288 aa16.57■□□□□ 0.24
FANCA-210ENST00000563318 R3HDM1Q15032 1099 aaKnown RBP16.57■□□□□ 0.24
FANCA-210ENST00000563318 PIGBQ92521 554 aa16.57■□□□□ 0.24
FANCA-210ENST00000563318 PSDA5PKW4 1024 aaPredicted RBP16.56■□□□□ 0.24
FANCA-210ENST00000563318 RALBP1Q15311 655 aa16.56■□□□□ 0.24
FANCA-210ENST00000563318 ZNF530Q6P9A1 599 aaPredicted RBP16.56■□□□□ 0.24
FANCA-210ENST00000563318 RSPH6AQ9H0K4 717 aa16.56■□□□□ 0.24
FANCA-210ENST00000563318 SLC27A3Q5K4L6 730 aa16.55■□□□□ 0.24
FANCA-210ENST00000563318 DCAF5Q96JK2 942 aa16.55■□□□□ 0.24
FANCA-210ENST00000563318 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
FANCA-210ENST00000563318 ERVV-2B6SEH9 535 aa16.54■□□□□ 0.24
FANCA-210ENST00000563318 MTHFSDQ2M296 383 aaKnown RBP16.54■□□□□ 0.24
FANCA-210ENST00000563318 AKT1S1Q96B36 256 aa16.54■□□□□ 0.24
FANCA-210ENST00000563318 SYTL4Q96C24 671 aaPredicted RBP16.54■□□□□ 0.24
FANCA-210ENST00000563318 SCN11AQ9UI33 1791 aa16.54■□□□□ 0.24
FANCA-210ENST00000563318 PALLDQ8WX93 1383 aa16.53■□□□□ 0.24
FANCA-210ENST00000563318 HSP90AB1P08238 724 aaKnown RBP16.53■□□□□ 0.24
FANCA-210ENST00000563318 ZNF827Q17R98 1081 aa16.53■□□□□ 0.24
FANCA-210ENST00000563318 AKAP4Q5JQC9 854 aa16.53■□□□□ 0.24
FANCA-210ENST00000563318 CFAP53Q96M91 514 aa16.53■□□□□ 0.24
FANCA-210ENST00000563318 ZNF831Q5JPB2 1677 aa16.53■□□□□ 0.24
FANCA-210ENST00000563318 SLC15A2Q16348 729 aa16.52■□□□□ 0.24
FANCA-210ENST00000563318 NBPF14Q5TI25 921 aa16.52■□□□□ 0.24
FANCA-210ENST00000563318 MPRIPQ6WCQ1 1025 aa16.52■□□□□ 0.24
FANCA-210ENST00000563318 QSER1Q2KHR3 1735 aa16.52■□□□□ 0.24
FANCA-210ENST00000563318 CICQ96RK0 1608 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms