RNA–Protein interactions for RNA: ENST00000563221.5

NAE1-210, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-210ENST00000563221 USP47Q96K76 1375 aa11.46□□□□□ -0.57
NAE1-210ENST00000563221 COL9A1P20849 921 aa11.46□□□□□ -0.57
NAE1-210ENST00000563221 NUDT16Q96DE0 195 aaKnown RBP11.46□□□□□ -0.57
NAE1-210ENST00000563221 EPAS1Q99814 870 aa11.46□□□□□ -0.57
NAE1-210ENST00000563221 ZBED2Q9BTP6 218 aa11.46□□□□□ -0.57
NAE1-210ENST00000563221 QRICH2Q9H0J4 1663 aa11.46□□□□□ -0.58
NAE1-210ENST00000563221 RGPD8O14715 1765 aaPredicted RBP11.45□□□□□ -0.58
NAE1-210ENST00000563221 GRXCR2A6NFK2 248 aa11.44□□□□□ -0.58
NAE1-210ENST00000563221 HSPA5P11021 654 aaKnown RBP11.44□□□□□ -0.58
NAE1-210ENST00000563221 SRPK2P78362 688 aaKnown RBP11.44□□□□□ -0.58
NAE1-210ENST00000563221 KCNV2Q8TDN2 545 aa11.44□□□□□ -0.58
NAE1-210ENST00000563221 ARIH1Q9Y4X5 557 aaPredicted RBP11.44□□□□□ -0.58
NAE1-210ENST00000563221 PPP1R3GB7ZBB8 358 aa11.43□□□□□ -0.58
NAE1-210ENST00000563221 ATP7BP35670 1465 aa11.43□□□□□ -0.58
NAE1-210ENST00000563221 EIF3AQ14152 1382 aaKnown RBP11.42□□□□□ -0.58
NAE1-210ENST00000563221 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
NAE1-210ENST00000563221 PROX2Q3B8N5 592 aa11.42□□□□□ -0.58
NAE1-210ENST00000563221 C6orf132Q5T0Z8 1188 aa11.42□□□□□ -0.58
NAE1-210ENST00000563221 ANKARQ7Z5J8 1434 aa11.42□□□□□ -0.58
NAE1-210ENST00000563221 DISP3Q9P2K9 1392 aa11.41□□□□□ -0.58
NAE1-210ENST00000563221 SOS2Q07890 1332 aaPredicted RBP11.41□□□□□ -0.58
NAE1-210ENST00000563221 EVC2Q86UK5 1308 aa11.41□□□□□ -0.58
NAE1-210ENST00000563221 MAP3K7O43318 606 aa11.41□□□□□ -0.58
NAE1-210ENST00000563221 KRT28Q7Z3Y7 464 aa11.41□□□□□ -0.58
NAE1-210ENST00000563221 SLC4A5Q9BY07 1137 aa11.41□□□□□ -0.58
NAE1-210ENST00000563221 CABP1Q9NZU7 370 aa11.41□□□□□ -0.58
NAE1-210ENST00000563221 COL16A1Q07092 1604 aaPredicted RBP11.41□□□□□ -0.58
NAE1-210ENST00000563221 AHDC1Q5TGY3 1603 aaPredicted RBP11.41□□□□□ -0.58
NAE1-210ENST00000563221 PHLPP1O60346 1717 aa11.4□□□□□ -0.58
NAE1-210ENST00000563221 C11orf95C9JLR9 678 aaPredicted RBP11.4□□□□□ -0.58
NAE1-210ENST00000563221 TSR1Q2NL82 804 aaKnown RBP11.4□□□□□ -0.58
NAE1-210ENST00000563221 KCTD12Q96CX2 325 aaKnown RBP11.4□□□□□ -0.58
NAE1-210ENST00000563221 PXDNQ92626 1479 aa11.39□□□□□ -0.59
NAE1-210ENST00000563221 NHSL1Q5SYE7 1610 aa11.39□□□□□ -0.59
NAE1-210ENST00000563221 PRIM1P49642 420 aaKnown RBP11.39□□□□□ -0.59
NAE1-210ENST00000563221 EN1Q05925 392 aaPredicted RBP11.39□□□□□ -0.59
NAE1-210ENST00000563221 SLC12A5Q9H2X9 1139 aa11.39□□□□□ -0.59
NAE1-210ENST00000563221 SBNO2Q9Y2G9 1366 aa11.39□□□□□ -0.59
NAE1-210ENST00000563221 ACEP12821 1306 aa11.38□□□□□ -0.59
NAE1-210ENST00000563221 PPIP5K1Q6PFW1 1433 aa11.38□□□□□ -0.59
NAE1-210ENST00000563221 PLEKHG3A1L390 1219 aa11.38□□□□□ -0.59
NAE1-210ENST00000563221 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
NAE1-210ENST00000563221 PSME1Q06323 249 aa11.38□□□□□ -0.59
NAE1-210ENST00000563221 NGDNQ8NEJ9 315 aaKnown RBP11.38□□□□□ -0.59
NAE1-210ENST00000563221 NPHP3Q7Z494 1330 aa11.37□□□□□ -0.59
NAE1-210ENST00000563221 NUTM2BA6NNL0 878 aaPredicted RBP11.36□□□□□ -0.59
NAE1-210ENST00000563221 NUTM2EB1AL46 878 aaPredicted RBP11.36□□□□□ -0.59
NAE1-210ENST00000563221 NUTM2AQ8IVF1 878 aaPredicted RBP11.36□□□□□ -0.59
NAE1-210ENST00000563221 TMC1Q8TDI8 760 aa11.36□□□□□ -0.59
NAE1-210ENST00000563221 CABLES1Q8TDN4 633 aa11.36□□□□□ -0.59
NAE1-210ENST00000563221 LRRC59Q96AG4 307 aaKnown RBP11.36□□□□□ -0.59
NAE1-210ENST00000563221 PNPLA6Q8IY17 1366 aa11.36□□□□□ -0.59
NAE1-210ENST00000563221 TOPAZ1Q8N9V7 1692 aa11.36□□□□□ -0.59
NAE1-210ENST00000563221 SPATA31A3Q5VYP0 1347 aa11.35□□□□□ -0.59
NAE1-210ENST00000563221 BHMG1C9JSJ3 638 aaPredicted RBP11.35□□□□□ -0.59
NAE1-210ENST00000563221 NUTM2GQ5VZR2 741 aa11.35□□□□□ -0.59
NAE1-210ENST00000563221 MRPL50Q8N5N7 158 aaKnown RBP11.35□□□□□ -0.59
NAE1-210ENST00000563221 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
NAE1-210ENST00000563221 POLR3AO14802 1390 aaPredicted RBP11.35□□□□□ -0.59
NAE1-210ENST00000563221 KIF1AQ12756 1690 aa11.34□□□□□ -0.59
NAE1-210ENST00000563221 JCADQ9P266 1359 aa11.34□□□□□ -0.59
NAE1-210ENST00000563221 TMF1P82094 1093 aa11.34□□□□□ -0.59
NAE1-210ENST00000563221 LMOD2Q6P5Q4 547 aa11.34□□□□□ -0.59
NAE1-210ENST00000563221 POLR3GLQ9BT43 218 aa11.34□□□□□ -0.59
NAE1-210ENST00000563221 LRP6O75581 1613 aa11.34□□□□□ -0.59
NAE1-210ENST00000563221 CD163L1Q9NR16 1453 aa11.33□□□□□ -0.6
NAE1-210ENST00000563221 GOLGA8CPA6NN73 597 aa11.33□□□□□ -0.6
NAE1-210ENST00000563221 NBPF3Q9H094 633 aa11.33□□□□□ -0.6
NAE1-210ENST00000563221 ATAD2Q6PL18 1390 aa11.32□□□□□ -0.6
NAE1-210ENST00000563221 OSBPP22059 807 aa11.32□□□□□ -0.6
NAE1-210ENST00000563221 MLLT3P42568 568 aaPredicted RBP11.32□□□□□ -0.6
NAE1-210ENST00000563221 CDHR5Q9HBB8 845 aa11.32□□□□□ -0.6
NAE1-210ENST00000563221 SBNO1A3KN83 1393 aa11.31□□□□□ -0.6
NAE1-210ENST00000563221 ADAMTS2O95450 1211 aa11.31□□□□□ -0.6
NAE1-210ENST00000563221 PUS7Q96PZ0 661 aaKnown RBP11.31□□□□□ -0.6
NAE1-210ENST00000563221 KIAA1468Q9P260 1216 aa11.31□□□□□ -0.6
NAE1-210ENST00000563221 RABGEF1Q9UJ41 708 aa11.31□□□□□ -0.6
NAE1-210ENST00000563221 CPSF1Q10570 1443 aaKnown RBP11.31□□□□□ -0.6
NAE1-210ENST00000563221 TNS3Q68CZ2 1445 aa11.31□□□□□ -0.6
NAE1-210ENST00000563221 SSH2Q76I76 1423 aa11.31□□□□□ -0.6
NAE1-210ENST00000563221 TRPM3Q9HCF6 1732 aaPredicted RBP11.31□□□□□ -0.6
NAE1-210ENST00000563221 USP6P35125 1406 aa11.3□□□□□ -0.6
NAE1-210ENST00000563221 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.3□□□□□ -0.6
NAE1-210ENST00000563221 HCSTQ9UBK5 93 aa11.3□□□□□ -0.6
NAE1-210ENST00000563221 A0A1W2PP64 1363 aa11.29□□□□□ -0.6
NAE1-210ENST00000563221 ITSN1Q15811 1721 aa11.29□□□□□ -0.6
NAE1-210ENST00000563221 MED1Q15648 1581 aaPredicted RBP11.29□□□□□ -0.6
NAE1-210ENST00000563221 TRIM6-TRIM34B2RNG4 842 aa11.29□□□□□ -0.6
NAE1-210ENST00000563221 PTPN5P54829 565 aa11.29□□□□□ -0.6
NAE1-210ENST00000563221 CARD14Q9BXL6 1004 aa11.29□□□□□ -0.6
NAE1-210ENST00000563221 RGS17Q9UGC6 210 aaPredicted RBP11.29□□□□□ -0.6
NAE1-210ENST00000563221 SEPT9Q9UHD8 586 aaPredicted RBP11.29□□□□□ -0.6
NAE1-210ENST00000563221 SHPRHQ149N8 1683 aa11.29□□□□□ -0.6
NAE1-210ENST00000563221 KIF7Q2M1P5 1343 aa11.29□□□□□ -0.6
NAE1-210ENST00000563221 TTC21BQ7Z4L5 1316 aa11.29□□□□□ -0.6
NAE1-210ENST00000563221 KTN1Q86UP2 1357 aaKnown RBP11.28□□□□□ -0.6
NAE1-210ENST00000563221 NME9Q86XW9 330 aa11.28□□□□□ -0.6
NAE1-210ENST00000563221 WNT2BQ93097 391 aa11.28□□□□□ -0.6
NAE1-210ENST00000563221 SPATA31A6Q5VVP1 1343 aa11.28□□□□□ -0.6
NAE1-210ENST00000563221 ABTB2Q8N961 1025 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms