RNA–Protein interactions for RNA: ENST00000562927.2

ABCD1P3-201, Transcript of ATP binding cassette subfamily D member 1 pseudogene 3, humanhuman

BASIC

Gene ABCD1P3, Length 605 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P3-201ENST00000562927 SGIP1Q9BQI5 828 aa17.57■□□□□ 0.4
ABCD1P3-201ENST00000562927 PAPPAQ13219 1627 aa17.57■□□□□ 0.4
ABCD1P3-201ENST00000562927 SMG6Q86US8 1419 aaKnown RBP17.56■□□□□ 0.4
ABCD1P3-201ENST00000562927 USHBP1Q8N6Y0 703 aa17.56■□□□□ 0.4
ABCD1P3-201ENST00000562927 AKT1S1Q96B36 256 aa17.56■□□□□ 0.4
ABCD1P3-201ENST00000562927 SYTL4Q96C24 671 aaPredicted RBP17.56■□□□□ 0.4
ABCD1P3-201ENST00000562927 BTAF1O14981 1849 aa17.56■□□□□ 0.4
ABCD1P3-201ENST00000562927 RAPGEF4Q8WZA2 1011 aa17.55■□□□□ 0.4
ABCD1P3-201ENST00000562927 PCGF6Q9BYE7 350 aa17.55■□□□□ 0.4
ABCD1P3-201ENST00000562927 NSD2O96028 1365 aa17.54■□□□□ 0.4
ABCD1P3-201ENST00000562927 FLT4P35916 1363 aa17.54■□□□□ 0.4
ABCD1P3-201ENST00000562927 NSD3Q9BZ95 1437 aa17.54■□□□□ 0.4
ABCD1P3-201ENST00000562927 TATP17735 454 aaPredicted RBP17.53■□□□□ 0.4
ABCD1P3-201ENST00000562927 YY1P25490 414 aa17.53■□□□□ 0.4
ABCD1P3-201ENST00000562927 SYT17Q9BSW7 474 aa17.53■□□□□ 0.4
ABCD1P3-201ENST00000562927 FHDC1Q9C0D6 1143 aaPredicted RBP17.52■□□□□ 0.4
ABCD1P3-201ENST00000562927 MYOM1P52179 1685 aa17.52■□□□□ 0.39
ABCD1P3-201ENST00000562927 KCNQ4P56696 695 aa17.51■□□□□ 0.39
ABCD1P3-201ENST00000562927 SLC16A10Q8TF71 515 aa17.51■□□□□ 0.39
ABCD1P3-201ENST00000562927 ARXQ96QS3 562 aa17.51■□□□□ 0.39
ABCD1P3-201ENST00000562927 EMILIN1Q9Y6C2 1016 aa17.51■□□□□ 0.39
ABCD1P3-201ENST00000562927 PNPLA7Q6ZV29 1317 aa17.49■□□□□ 0.39
ABCD1P3-201ENST00000562927 RGPD2P0DJD1 1756 aa17.49■□□□□ 0.39
ABCD1P3-201ENST00000562927 TFCP2L1Q9NZI6 479 aa17.49■□□□□ 0.39
ABCD1P3-201ENST00000562927 SHANK3Q9BYB0 1731 aa17.49■□□□□ 0.39
ABCD1P3-201ENST00000562927 PCDH11XQ9BZA7 1347 aa17.48■□□□□ 0.39
ABCD1P3-201ENST00000562927 PCDH11YQ9BZA8 1340 aa17.48■□□□□ 0.39
ABCD1P3-201ENST00000562927 CCNL1Q9UK58 526 aaPredicted RBP17.48■□□□□ 0.39
ABCD1P3-201ENST00000562927 KIF20BQ96Q89 1820 aa17.48■□□□□ 0.39
ABCD1P3-201ENST00000562927 UTRNP46939 3433 aa17.48■□□□□ 0.39
ABCD1P3-201ENST00000562927 WASHC2AQ641Q2 1341 aa17.47■□□□□ 0.39
ABCD1P3-201ENST00000562927 DOT1LQ8TEK3 1739 aa17.47■□□□□ 0.39
ABCD1P3-201ENST00000562927 PPM1GO15355 546 aaPredicted RBP17.47■□□□□ 0.39
ABCD1P3-201ENST00000562927 CYP27B1O15528 508 aa17.47■□□□□ 0.39
ABCD1P3-201ENST00000562927 MAP3K5Q99683 1374 aa17.47■□□□□ 0.39
ABCD1P3-201ENST00000562927 NCAPD2Q15021 1401 aa17.46■□□□□ 0.39
ABCD1P3-201ENST00000562927 POLKQ9UBT6 870 aa17.45■□□□□ 0.38
ABCD1P3-201ENST00000562927 POLD1P28340 1107 aa17.44■□□□□ 0.38
ABCD1P3-201ENST00000562927 EIF4G2P78344 907 aaKnown RBP eCLIP17.44■□□□□ 0.38
ABCD1P3-201ENST00000562927 NKX1-1Q15270 411 aaPredicted RBP17.43■□□□□ 0.38
ABCD1P3-201ENST00000562927 MPRIPQ6WCQ1 1025 aa17.43■□□□□ 0.38
ABCD1P3-201ENST00000562927 EYA1Q99502 592 aa17.43■□□□□ 0.38
ABCD1P3-201ENST00000562927 POLR3GLQ9BT43 218 aa17.43■□□□□ 0.38
ABCD1P3-201ENST00000562927 SPG7Q9UQ90 795 aa17.43■□□□□ 0.38
ABCD1P3-201ENST00000562927 LY75O60449 1722 aa17.43■□□□□ 0.38
ABCD1P3-201ENST00000562927 HSPA5P11021 654 aaKnown RBP17.42■□□□□ 0.38
ABCD1P3-201ENST00000562927 HMGB2P26583 209 aaKnown RBP17.42■□□□□ 0.38
ABCD1P3-201ENST00000562927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.42■□□□□ 0.38
ABCD1P3-201ENST00000562927 QSER1Q2KHR3 1735 aa17.41■□□□□ 0.38
ABCD1P3-201ENST00000562927 COL23A1Q86Y22 540 aaPredicted RBP17.41■□□□□ 0.38
ABCD1P3-201ENST00000562927 KAT6BQ8WYB5 2073 aa17.41■□□□□ 0.38
ABCD1P3-201ENST00000562927 PALLDQ8WX93 1383 aa17.4■□□□□ 0.38
ABCD1P3-201ENST00000562927 CCER1Q8TC90 406 aaPredicted RBP17.4■□□□□ 0.38
ABCD1P3-201ENST00000562927 ANKRD26Q9UPS8 1709 aa17.39■□□□□ 0.37
ABCD1P3-201ENST00000562927 TNNT2P45379 298 aaPredicted RBP17.39■□□□□ 0.37
ABCD1P3-201ENST00000562927 PIGBQ92521 554 aa17.39■□□□□ 0.37
ABCD1P3-201ENST00000562927 SMARCC1Q92922 1105 aaPredicted RBP17.39■□□□□ 0.37
ABCD1P3-201ENST00000562927 PANK3Q9H999 370 aa17.39■□□□□ 0.37
ABCD1P3-201ENST00000562927 MSH5O43196 834 aa17.38■□□□□ 0.37
ABCD1P3-201ENST00000562927 EIF4A2Q14240 407 aaKnown RBP17.38■□□□□ 0.37
ABCD1P3-201ENST00000562927 FLAD1Q8NFF5 587 aa17.37■□□□□ 0.37
ABCD1P3-201ENST00000562927 COL24A1Q17RW2 1714 aa17.37■□□□□ 0.37
ABCD1P3-201ENST00000562927 PKD1L3Q7Z443 1732 aa17.37■□□□□ 0.37
ABCD1P3-201ENST00000562927 PHKG2P15735 406 aa17.36■□□□□ 0.37
ABCD1P3-201ENST00000562927 GOLGB1Q14789 3259 aaKnown RBP17.35■□□□□ 0.37
ABCD1P3-201ENST00000562927 ZEB1P37275 1124 aaPredicted RBP17.35■□□□□ 0.37
ABCD1P3-201ENST00000562927 GPR162Q16538 588 aa17.35■□□□□ 0.37
ABCD1P3-201ENST00000562927 IFNL2Q8IZJ0 200 aa17.35■□□□□ 0.37
ABCD1P3-201ENST00000562927 KLHL34Q8N239 644 aa17.35■□□□□ 0.37
ABCD1P3-201ENST00000562927 PLEKHG2Q9H7P9 1386 aa17.35■□□□□ 0.37
ABCD1P3-201ENST00000562927 ZNF784Q8NCA9 323 aaPredicted RBP17.34■□□□□ 0.37
ABCD1P3-201ENST00000562927 TUBGCP6Q96RT7 1819 aa17.33■□□□□ 0.37
ABCD1P3-201ENST00000562927 TOGARAM1Q9Y4F4 1720 aa17.33■□□□□ 0.37
ABCD1P3-201ENST00000562927 IGSF1Q8N6C5 1336 aa17.33■□□□□ 0.36
ABCD1P3-201ENST00000562927 NLGN2Q8NFZ4 835 aa17.33■□□□□ 0.36
ABCD1P3-201ENST00000562927 TMOD3Q9NYL9 352 aa17.33■□□□□ 0.36
ABCD1P3-201ENST00000562927 LOC102724428A0A0B4J2F2 783 aa17.32■□□□□ 0.36
ABCD1P3-201ENST00000562927 SIK1P57059 783 aa17.32■□□□□ 0.36
ABCD1P3-201ENST00000562927 MSL1Q68DK7 614 aa17.32■□□□□ 0.36
ABCD1P3-201ENST00000562927 AK7Q96M32 723 aa17.32■□□□□ 0.36
ABCD1P3-201ENST00000562927 C5P01031 1676 aa17.32■□□□□ 0.36
ABCD1P3-201ENST00000562927 MAP2P11137 1827 aaKnown RBP17.31■□□□□ 0.36
ABCD1P3-201ENST00000562927 MORC1Q86VD1 984 aa17.31■□□□□ 0.36
ABCD1P3-201ENST00000562927 AMIGO3Q86WK7 504 aa17.31■□□□□ 0.36
ABCD1P3-201ENST00000562927 ASAP1Q9ULH1 1129 aa17.31■□□□□ 0.36
ABCD1P3-201ENST00000562927 LINC00116Q8NCU8 138 aa17.29■□□□□ 0.36
ABCD1P3-201ENST00000562927 ATG3Q9NT62 314 aa17.29■□□□□ 0.36
ABCD1P3-201ENST00000562927 C4BP0C0L5 1744 aa17.28■□□□□ 0.36
ABCD1P3-201ENST00000562927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.28■□□□□ 0.36
ABCD1P3-201ENST00000562927 ERVV-2B6SEH9 535 aa17.28■□□□□ 0.36
ABCD1P3-201ENST00000562927 SSFA2P28290 1259 aa17.28■□□□□ 0.36
ABCD1P3-201ENST00000562927 ITPK1Q13572 414 aa17.28■□□□□ 0.36
ABCD1P3-201ENST00000562927 PLEKHO1Q53GL0 409 aaPredicted RBP17.28■□□□□ 0.36
ABCD1P3-201ENST00000562927 PELP1Q8IZL8 1130 aaKnown RBP17.28■□□□□ 0.36
ABCD1P3-201ENST00000562927 DCAF5Q96JK2 942 aa17.28■□□□□ 0.36
ABCD1P3-201ENST00000562927 KNSTRNQ9Y448 316 aa17.28■□□□□ 0.36
ABCD1P3-201ENST00000562927 CD2APQ9Y5K6 639 aa17.28■□□□□ 0.36
ABCD1P3-201ENST00000562927 ITGB4P16144 1822 aa17.28■□□□□ 0.36
ABCD1P3-201ENST00000562927 HSP90AB1P08238 724 aaKnown RBP17.27■□□□□ 0.36
ABCD1P3-201ENST00000562927 ATP6V1AP38606 617 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms