RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 DOT1LQ8TEK3 1739 aa22.79■■□□□ 1.24
CDT1-202ENST00000562747 SYT17Q9BSW7 474 aa22.79■■□□□ 1.24
CDT1-202ENST00000562747 LRRC4BQ9NT99 713 aa22.79■■□□□ 1.24
CDT1-202ENST00000562747 QSER1Q2KHR3 1735 aa22.79■■□□□ 1.24
CDT1-202ENST00000562747 KAT6BQ8WYB5 2073 aa22.77■■□□□ 1.24
CDT1-202ENST00000562747 IP6K1Q92551 441 aa22.76■■□□□ 1.23
CDT1-202ENST00000562747 COL24A1Q17RW2 1714 aa22.76■■□□□ 1.23
CDT1-202ENST00000562747 MAP3K19Q56UN5 1328 aa22.76■■□□□ 1.23
CDT1-202ENST00000562747 LTV1Q96GA3 475 aaPredicted RBP22.74■■□□□ 1.23
CDT1-202ENST00000562747 RTL1A6NKG5 1358 aa22.74■■□□□ 1.23
CDT1-202ENST00000562747 LY75O60449 1722 aa22.74■■□□□ 1.23
CDT1-202ENST00000562747 CHD4Q14839 1912 aa22.73■■□□□ 1.23
CDT1-202ENST00000562747 FBLN1P23142 703 aa22.73■■□□□ 1.23
CDT1-202ENST00000562747 ANKRD26Q9UPS8 1709 aa22.73■■□□□ 1.23
CDT1-202ENST00000562747 NSD2O96028 1365 aa22.73■■□□□ 1.23
CDT1-202ENST00000562747 HOXC9P31274 260 aa22.72■■□□□ 1.23
CDT1-202ENST00000562747 AMPHP49418 695 aa22.72■■□□□ 1.23
CDT1-202ENST00000562747 DDX54Q8TDD1 881 aaKnown RBP22.72■■□□□ 1.23
CDT1-202ENST00000562747 AKT1S1Q96B36 256 aa22.72■■□□□ 1.23
CDT1-202ENST00000562747 ARXQ96QS3 562 aa22.72■■□□□ 1.23
CDT1-202ENST00000562747 WASHC2AQ641Q2 1341 aa22.72■■□□□ 1.23
CDT1-202ENST00000562747 MAP3K5Q99683 1374 aa22.72■■□□□ 1.23
CDT1-202ENST00000562747 MEGF6O75095 1541 aa22.72■■□□□ 1.23
CDT1-202ENST00000562747 RRS1Q15050 365 aaKnown RBP22.71■■□□□ 1.23
CDT1-202ENST00000562747 ZNF784Q8NCA9 323 aaPredicted RBP22.71■■□□□ 1.23
CDT1-202ENST00000562747 KIF24Q5T7B8 1368 aa22.71■■□□□ 1.23
CDT1-202ENST00000562747 KNSTRNQ9Y448 316 aa22.7■■□□□ 1.22
CDT1-202ENST00000562747 KCNQ4P56696 695 aa22.69■■□□□ 1.22
CDT1-202ENST00000562747 PNPLA7Q6ZV29 1317 aa22.68■■□□□ 1.22
CDT1-202ENST00000562747 FLT4P35916 1363 aa22.66■■□□□ 1.22
CDT1-202ENST00000562747 SLC27A3Q5K4L6 730 aa22.66■■□□□ 1.22
CDT1-202ENST00000562747 PRIM1P49642 420 aaKnown RBP22.65■■□□□ 1.22
CDT1-202ENST00000562747 INSRP06213 1382 aa22.64■■□□□ 1.22
CDT1-202ENST00000562747 SYTL4Q96C24 671 aaPredicted RBP22.64■■□□□ 1.21
CDT1-202ENST00000562747 PER1O15534 1290 aaPredicted RBP22.63■■□□□ 1.21
CDT1-202ENST00000562747 AMER1Q5JTC6 1135 aaPredicted RBP22.63■■□□□ 1.21
CDT1-202ENST00000562747 EMILIN1Q9Y6C2 1016 aa22.63■■□□□ 1.21
CDT1-202ENST00000562747 MAP2P11137 1827 aaKnown RBP22.63■■□□□ 1.21
CDT1-202ENST00000562747 SMG6Q86US8 1419 aaKnown RBP22.63■■□□□ 1.21
CDT1-202ENST00000562747 ZEB1P37275 1124 aaPredicted RBP22.62■■□□□ 1.21
CDT1-202ENST00000562747 HSP90AB2PQ58FF8 381 aa22.61■■□□□ 1.21
CDT1-202ENST00000562747 ZCRB1Q8TBF4 217 aaKnown RBP22.61■■□□□ 1.21
CDT1-202ENST00000562747 MORC1Q86VD1 984 aa22.6■■□□□ 1.21
CDT1-202ENST00000562747 USHBP1Q8N6Y0 703 aa22.6■■□□□ 1.21
CDT1-202ENST00000562747 SLC16A10Q8TF71 515 aa22.6■■□□□ 1.21
CDT1-202ENST00000562747 POLKQ9UBT6 870 aa22.6■■□□□ 1.21
CDT1-202ENST00000562747 C5P01031 1676 aa22.6■■□□□ 1.21
CDT1-202ENST00000562747 NBPF6Q5VWK0 638 aa22.59■■□□□ 1.21
CDT1-202ENST00000562747 KLHL34Q8N239 644 aa22.59■■□□□ 1.21
CDT1-202ENST00000562747 NBPF4Q96M43 638 aa22.59■■□□□ 1.21
CDT1-202ENST00000562747 TFCP2L1Q9NZI6 479 aa22.59■■□□□ 1.21
CDT1-202ENST00000562747 TOGARAM1Q9Y4F4 1720 aa22.58■■□□□ 1.21
CDT1-202ENST00000562747 TNNT2P45379 298 aaPredicted RBP22.58■■□□□ 1.21
CDT1-202ENST00000562747 PPM1GO15355 546 aaPredicted RBP22.57■■□□□ 1.2
CDT1-202ENST00000562747 NLGN2Q8NFZ4 835 aa22.57■■□□□ 1.2
CDT1-202ENST00000562747 NPC1L1Q9UHC9 1359 aa22.57■■□□□ 1.2
CDT1-202ENST00000562747 POLD1P28340 1107 aa22.56■■□□□ 1.2
CDT1-202ENST00000562747 GPR162Q16538 588 aa22.56■■□□□ 1.2
CDT1-202ENST00000562747 CCNL1Q9UK58 526 aaPredicted RBP22.56■■□□□ 1.2
CDT1-202ENST00000562747 TAF1LQ8IZX4 1826 aa22.55■■□□□ 1.2
CDT1-202ENST00000562747 GOLGB1Q14789 3259 aaKnown RBP22.54■■□□□ 1.2
CDT1-202ENST00000562747 PKD1L3Q7Z443 1732 aa22.52■■□□□ 1.2
CDT1-202ENST00000562747 COL23A1Q86Y22 540 aaPredicted RBP22.52■■□□□ 1.2
CDT1-202ENST00000562747 PELP1Q8IZL8 1130 aaKnown RBP22.52■■□□□ 1.2
CDT1-202ENST00000562747 ITGB4P16144 1822 aa22.52■■□□□ 1.2
CDT1-202ENST00000562747 CC2D1BQ5T0F9 858 aaKnown RBP22.51■■□□□ 1.19
CDT1-202ENST00000562747 C1QTNF8P60827 252 aa22.49■■□□□ 1.19
CDT1-202ENST00000562747 MSL1Q68DK7 614 aa22.49■■□□□ 1.19
CDT1-202ENST00000562747 RAPGEF4Q8WZA2 1011 aa22.49■■□□□ 1.19
CDT1-202ENST00000562747 NCAPD2Q15021 1401 aa22.48■■□□□ 1.19
CDT1-202ENST00000562747 YBX3P16989 372 aaKnown RBP eCLIP22.48■■□□□ 1.191e-11■□□□□ 10.5
CDT1-202ENST00000562747 PCDH11XQ9BZA7 1347 aa22.48■■□□□ 1.19
CDT1-202ENST00000562747 PCDH11YQ9BZA8 1340 aa22.48■■□□□ 1.19
CDT1-202ENST00000562747 C4BP0C0L5 1744 aa22.48■■□□□ 1.19
CDT1-202ENST00000562747 MSH5O43196 834 aa22.47■■□□□ 1.19
CDT1-202ENST00000562747 TATP17735 454 aaPredicted RBP22.47■■□□□ 1.19
CDT1-202ENST00000562747 EIF4A2Q14240 407 aaKnown RBP22.47■■□□□ 1.19
CDT1-202ENST00000562747 PALLDQ8WX93 1383 aa22.47■■□□□ 1.19
CDT1-202ENST00000562747 SENP3-EIF4A1A0A087X0R7 540 aa22.46■■□□□ 1.19
CDT1-202ENST00000562747 CYP27B1O15528 508 aa22.45■■□□□ 1.18
CDT1-202ENST00000562747 EYA1Q99502 592 aa22.45■■□□□ 1.18
CDT1-202ENST00000562747 UBR3Q6ZT12 1888 aa22.45■■□□□ 1.18
CDT1-202ENST00000562747 AMIGO3Q86WK7 504 aa22.43■■□□□ 1.18
CDT1-202ENST00000562747 MTHFSP49914 203 aa22.42■■□□□ 1.18
CDT1-202ENST00000562747 MPRIPQ6WCQ1 1025 aa22.42■■□□□ 1.18
CDT1-202ENST00000562747 IGSF1Q8N6C5 1336 aa22.41■■□□□ 1.18
CDT1-202ENST00000562747 GIGYF1O75420 1035 aaPredicted RBP22.39■■□□□ 1.17
CDT1-202ENST00000562747 CNGB1Q14028 1251 aaPredicted RBP22.39■■□□□ 1.17
CDT1-202ENST00000562747 SMIM5Q71RC9 77 aa22.39■■□□□ 1.17
CDT1-202ENST00000562747 PLEKHG2Q9H7P9 1386 aa22.38■■□□□ 1.17
CDT1-202ENST00000562747 IL13P35225 146 aa22.37■■□□□ 1.17
CDT1-202ENST00000562747 PIGBQ92521 554 aa22.36■■□□□ 1.17
CDT1-202ENST00000562747 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.35■■□□□ 1.17
CDT1-202ENST00000562747 ATP10DQ9P241 1426 aa22.34■■□□□ 1.17
CDT1-202ENST00000562747 GRIN3BO60391 1043 aa22.34■■□□□ 1.17
CDT1-202ENST00000562747 SPG7Q9UQ90 795 aa22.34■■□□□ 1.17
CDT1-202ENST00000562747 CD2APQ9Y5K6 639 aa22.34■■□□□ 1.17
CDT1-202ENST00000562747 PHF14O94880 888 aa22.33■■□□□ 1.17
CDT1-202ENST00000562747 NKX1-1Q15270 411 aaPredicted RBP22.33■■□□□ 1.17
CDT1-202ENST00000562747 FLAD1Q8NFF5 587 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms