RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 FOXO3O43524 673 aa12.44□□□□□ -0.42
SMG1-205ENST00000561947 ESCO1Q5FWF5 840 aa12.44□□□□□ -0.42
SMG1-205ENST00000561947 API5Q9BZZ5 524 aaKnown RBP12.44□□□□□ -0.42
SMG1-205ENST00000561947 RTF1Q92541 710 aaKnown RBP12.43□□□□□ -0.42
SMG1-205ENST00000561947 PHRF1Q9P1Y6 1649 aaKnown RBP12.43□□□□□ -0.42
SMG1-205ENST00000561947 PSME1Q06323 249 aa12.43□□□□□ -0.42
SMG1-205ENST00000561947 DNAJC5Q9H3Z4 198 aa12.43□□□□□ -0.42
SMG1-205ENST00000561947 ZBTB7BO15156 539 aaPredicted RBP12.42□□□□□ -0.42
SMG1-205ENST00000561947 SMC5Q8IY18 1101 aa12.42□□□□□ -0.42
SMG1-205ENST00000561947 HTATSF1O43719 755 aaKnown RBP12.41□□□□□ -0.42
SMG1-205ENST00000561947 KRT24Q2M2I5 525 aa12.41□□□□□ -0.42
SMG1-205ENST00000561947 IP6K1Q92551 441 aa12.4□□□□□ -0.42
SMG1-205ENST00000561947 KIF1AQ12756 1690 aa12.4□□□□□ -0.42
SMG1-205ENST00000561947 TRPM3Q9HCF6 1732 aaPredicted RBP12.4□□□□□ -0.42
SMG1-205ENST00000561947 KCNH5Q8NCM2 988 aa12.4□□□□□ -0.42
SMG1-205ENST00000561947 LTV1Q96GA3 475 aaPredicted RBP12.4□□□□□ -0.42
SMG1-205ENST00000561947 SLIT3O75094 1523 aa12.39□□□□□ -0.43
SMG1-205ENST00000561947 TSPYL4Q9UJ04 414 aa12.39□□□□□ -0.43
SMG1-205ENST00000561947 RGS12O14924 1447 aa12.39□□□□□ -0.43
SMG1-205ENST00000561947 GNAT3A8MTJ3 354 aa12.39□□□□□ -0.43
SMG1-205ENST00000561947 ORAI2Q96SN7 254 aa12.39□□□□□ -0.43
SMG1-205ENST00000561947 MAP3K5Q99683 1374 aa12.38□□□□□ -0.43
SMG1-205ENST00000561947 PROSER2Q86WR7 435 aaPredicted RBP12.38□□□□□ -0.43
SMG1-205ENST00000561947 MSH6P52701 1360 aa12.38□□□□□ -0.43
SMG1-205ENST00000561947 RTN4Q9NQC3 1192 aaKnown RBP12.38□□□□□ -0.43
SMG1-205ENST00000561947 MIS18AQ9NYP9 233 aa12.38□□□□□ -0.43
SMG1-205ENST00000561947 RGPD2P0DJD1 1756 aa12.38□□□□□ -0.43
SMG1-205ENST00000561947 USP19O94966 1318 aa12.37□□□□□ -0.43
SMG1-205ENST00000561947 PTPRCP08575 1304 aa12.37□□□□□ -0.43
SMG1-205ENST00000561947 NUCB1Q02818 461 aa12.37□□□□□ -0.43
SMG1-205ENST00000561947 INTS3Q68E01 1043 aaKnown RBP12.37□□□□□ -0.43
SMG1-205ENST00000561947 C1orf115Q9H7X2 142 aa12.37□□□□□ -0.43
SMG1-205ENST00000561947 C1orf167Q5SNV9 1468 aa12.36□□□□□ -0.43
SMG1-205ENST00000561947 SEC24BO95487 1268 aa12.36□□□□□ -0.43
SMG1-205ENST00000561947 FAM208AQ9UK61 1670 aaKnown RBP12.36□□□□□ -0.43
SMG1-205ENST00000561947 USHBP1Q8N6Y0 703 aa12.36□□□□□ -0.43
SMG1-205ENST00000561947 GCC1Q96CN9 775 aa12.35□□□□□ -0.43
SMG1-205ENST00000561947 C19orf44Q9H6X5 657 aa12.35□□□□□ -0.43
SMG1-205ENST00000561947 STRCP1A6NGW2 1772 aa12.35□□□□□ -0.43
SMG1-205ENST00000561947 CACNA1FO60840 1977 aa12.35□□□□□ -0.43
SMG1-205ENST00000561947 XPCQ01831 940 aaPredicted RBP12.34□□□□□ -0.43
SMG1-205ENST00000561947 CHD1LQ86WJ1 897 aa12.34□□□□□ -0.43
SMG1-205ENST00000561947 IL17REQ8NFR9 667 aa12.34□□□□□ -0.43
SMG1-205ENST00000561947 BABAM1Q9NWV8 329 aa12.34□□□□□ -0.43
SMG1-205ENST00000561947 SLC4A2P04920 1241 aa12.34□□□□□ -0.43
SMG1-205ENST00000561947 NBPF6Q5VWK0 638 aa12.34□□□□□ -0.43
SMG1-205ENST00000561947 SIRT2Q8IXJ6 389 aa12.34□□□□□ -0.43
SMG1-205ENST00000561947 NBPF4Q96M43 638 aa12.34□□□□□ -0.43
SMG1-205ENST00000561947 LMO7Q8WWI1 1683 aa12.34□□□□□ -0.43
SMG1-205ENST00000561947 ALS2Q96Q42 1657 aa12.34□□□□□ -0.43
SMG1-205ENST00000561947 MST1RQ04912 1400 aa12.34□□□□□ -0.43
SMG1-205ENST00000561947 ZBTB7CA1YPR0 619 aa12.34□□□□□ -0.43
SMG1-205ENST00000561947 GCP02774 474 aa12.34□□□□□ -0.43
SMG1-205ENST00000561947 KRT28Q7Z3Y7 464 aa12.34□□□□□ -0.43
SMG1-205ENST00000561947 ARHGEF25Q86VW2 580 aa12.34□□□□□ -0.43
SMG1-205ENST00000561947 SOS1Q07889 1333 aaPredicted RBP12.33□□□□□ -0.44
SMG1-205ENST00000561947 CAMTA1Q9Y6Y1 1673 aa12.33□□□□□ -0.44
SMG1-205ENST00000561947 MED1Q15648 1581 aaPredicted RBP12.33□□□□□ -0.44
SMG1-205ENST00000561947 LNPKQ9C0E8 428 aa12.33□□□□□ -0.44
SMG1-205ENST00000561947 NCAPD2Q15021 1401 aa12.32□□□□□ -0.44
SMG1-205ENST00000561947 TAF7Q15545 349 aaPredicted RBP12.32□□□□□ -0.44
SMG1-205ENST00000561947 UPF2Q9HAU5 1272 aaKnown RBP12.32□□□□□ -0.44
SMG1-205ENST00000561947 CEMIPQ8WUJ3 1361 aa12.32□□□□□ -0.44
SMG1-205ENST00000561947 DCCP43146 1447 aa12.32□□□□□ -0.44
SMG1-205ENST00000561947 ATP10DQ9P241 1426 aa12.32□□□□□ -0.44
SMG1-205ENST00000561947 DAXXQ9UER7 740 aaPredicted RBP12.32□□□□□ -0.44
SMG1-205ENST00000561947 ANKRD45Q5TZF3 282 aa12.31□□□□□ -0.44
SMG1-205ENST00000561947 LMOD2Q6P5Q4 547 aa12.31□□□□□ -0.44
SMG1-205ENST00000561947 TMEM94Q12767 1356 aa12.31□□□□□ -0.44
SMG1-205ENST00000561947 KDM3BQ7LBC6 1761 aa12.31□□□□□ -0.44
SMG1-205ENST00000561947 NCOA3Q9Y6Q9 1424 aa12.31□□□□□ -0.44
SMG1-205ENST00000561947 G2E3Q7L622 706 aa12.31□□□□□ -0.44
SMG1-205ENST00000561947 STK31Q9BXU1 1019 aa12.31□□□□□ -0.44
SMG1-205ENST00000561947 N4BP2Q86UW6 1770 aaPredicted RBP12.3□□□□□ -0.44
SMG1-205ENST00000561947 RGPD5Q99666 1765 aa12.3□□□□□ -0.44
SMG1-205ENST00000561947 NBR1Q14596 966 aa12.3□□□□□ -0.44
SMG1-205ENST00000561947 CCDC30Q5VVM6 783 aa12.3□□□□□ -0.44
SMG1-205ENST00000561947 LRRC59Q96AG4 307 aaKnown RBP12.3□□□□□ -0.44
SMG1-205ENST00000561947 ATF3P18847 181 aa12.3□□□□□ -0.44
SMG1-205ENST00000561947 SLC4A3P48751 1232 aa12.3□□□□□ -0.44
SMG1-205ENST00000561947 ANKRD44Q8N8A2 993 aa12.3□□□□□ -0.44
SMG1-205ENST00000561947 TBC1D32Q96NH3 1257 aa12.3□□□□□ -0.44
SMG1-205ENST00000561947 CCT4P50991 539 aaKnown RBP12.29□□□□□ -0.44
SMG1-205ENST00000561947 RPAP2Q8IXW5 612 aaPredicted RBP12.29□□□□□ -0.44
SMG1-205ENST00000561947 ANKRD24Q8TF21 1146 aa12.29□□□□□ -0.44
SMG1-205ENST00000561947 PLEKHG5O94827 1062 aa12.28□□□□□ -0.44
SMG1-205ENST00000561947 PLEKHO1Q53GL0 409 aaPredicted RBP12.28□□□□□ -0.44
SMG1-205ENST00000561947 MEIS3Q99687 375 aa12.28□□□□□ -0.44
SMG1-205ENST00000561947 DCTPP1Q9H773 170 aa12.28□□□□□ -0.44
SMG1-205ENST00000561947 AKAP4Q5JQC9 854 aa12.28□□□□□ -0.44
SMG1-205ENST00000561947 CEP85Q6P2H3 762 aa12.28□□□□□ -0.44
SMG1-205ENST00000561947 F6X3S4 739 aa12.27□□□□□ -0.44
SMG1-205ENST00000561947 AMOTQ4VCS5 1084 aa12.27□□□□□ -0.44
SMG1-205ENST00000561947 BMP2KLQ5H9B9 411 aa12.27□□□□□ -0.44
SMG1-205ENST00000561947 ZNF530Q6P9A1 599 aaPredicted RBP12.27□□□□□ -0.44
SMG1-205ENST00000561947 PXDNQ92626 1479 aa12.27□□□□□ -0.45
SMG1-205ENST00000561947 FLIIQ13045 1269 aa12.27□□□□□ -0.45
SMG1-205ENST00000561947 SLC4A10Q6U841 1118 aa12.26□□□□□ -0.45
SMG1-205ENST00000561947 LGR6Q9HBX8 967 aa12.26□□□□□ -0.45
SMG1-205ENST00000561947 PXDNLA1KZ92 1463 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms