RNA–Protein interactions for RNA: ENST00000561904.5

E2F4-202, Transcript of E2F transcription factor 4, humanhuman

TSL 3

Gene E2F4, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F4-202ENST00000561904 NBPF6Q5VWK0 638 aa24.77■■□□□ 1.56
E2F4-202ENST00000561904 NBPF4Q96M43 638 aa24.77■■□□□ 1.56
E2F4-202ENST00000561904 SGIP1Q9BQI5 828 aa24.77■■□□□ 1.56
E2F4-202ENST00000561904 KIF20BQ96Q89 1820 aa24.77■■□□□ 1.56
E2F4-202ENST00000561904 ZCRB1Q8TBF4 217 aaKnown RBP24.76■■□□□ 1.55
E2F4-202ENST00000561904 RTL1A6NKG5 1358 aa24.75■■□□□ 1.55
E2F4-202ENST00000561904 AKT1S1Q96B36 256 aa24.74■■□□□ 1.55
E2F4-202ENST00000561904 SYT17Q9BSW7 474 aa24.74■■□□□ 1.55
E2F4-202ENST00000561904 NSD2O96028 1365 aa24.74■■□□□ 1.55
E2F4-202ENST00000561904 HSP90AB2PQ58FF8 381 aa24.72■■□□□ 1.55
E2F4-202ENST00000561904 TUBGCP6Q96RT7 1819 aa24.72■■□□□ 1.55
E2F4-202ENST00000561904 ARXQ96QS3 562 aa24.71■■□□□ 1.55
E2F4-202ENST00000561904 CARD14Q9BXL6 1004 aa24.71■■□□□ 1.55
E2F4-202ENST00000561904 SLC27A3Q5K4L6 730 aa24.7■■□□□ 1.54
E2F4-202ENST00000561904 SMG6Q86US8 1419 aaKnown RBP24.69■■□□□ 1.54
E2F4-202ENST00000561904 LY75O60449 1722 aa24.69■■□□□ 1.54
E2F4-202ENST00000561904 PNPLA7Q6ZV29 1317 aa24.68■■□□□ 1.54
E2F4-202ENST00000561904 QSER1Q2KHR3 1735 aa24.67■■□□□ 1.54
E2F4-202ENST00000561904 RAPGEF4Q8WZA2 1011 aa24.67■■□□□ 1.54
E2F4-202ENST00000561904 NSD3Q9BZ95 1437 aa24.67■■□□□ 1.54
E2F4-202ENST00000561904 INSRP06213 1382 aa24.67■■□□□ 1.54
E2F4-202ENST00000561904 CDCA8Q53HL2 280 aa24.66■■□□□ 1.54
E2F4-202ENST00000561904 TFCP2L1Q9NZI6 479 aa24.66■■□□□ 1.54
E2F4-202ENST00000561904 EMILIN1Q9Y6C2 1016 aa24.66■■□□□ 1.54
E2F4-202ENST00000561904 TATP17735 454 aaPredicted RBP24.65■■□□□ 1.54
E2F4-202ENST00000561904 FLT4P35916 1363 aa24.65■■□□□ 1.54
E2F4-202ENST00000561904 KLHL34Q8N239 644 aa24.64■■□□□ 1.54
E2F4-202ENST00000561904 CCNL1Q9UK58 526 aaPredicted RBP24.64■■□□□ 1.54
E2F4-202ENST00000561904 CGNL1Q0VF96 1302 aa24.62■■□□□ 1.53
E2F4-202ENST00000561904 PPM1GO15355 546 aaPredicted RBP24.61■■□□□ 1.53
E2F4-202ENST00000561904 PCGF6Q9BYE7 350 aa24.61■■□□□ 1.53
E2F4-202ENST00000561904 COL24A1Q17RW2 1714 aa24.59■■□□□ 1.53
E2F4-202ENST00000561904 SLC16A10Q8TF71 515 aa24.59■■□□□ 1.53
E2F4-202ENST00000561904 POLR3GLQ9BT43 218 aa24.59■■□□□ 1.53
E2F4-202ENST00000561904 PCDH11XQ9BZA7 1347 aa24.59■■□□□ 1.53
E2F4-202ENST00000561904 PCDH11YQ9BZA8 1340 aa24.59■■□□□ 1.53
E2F4-202ENST00000561904 MAP3K5Q99683 1374 aa24.58■■□□□ 1.53
E2F4-202ENST00000561904 GOLGB1Q14789 3259 aaKnown RBP24.58■■□□□ 1.53
E2F4-202ENST00000561904 CYP27B1O15528 508 aa24.58■■□□□ 1.53
E2F4-202ENST00000561904 MSH5O43196 834 aa24.58■■□□□ 1.53
E2F4-202ENST00000561904 POLD1P28340 1107 aa24.58■■□□□ 1.53
E2F4-202ENST00000561904 TOGARAM1Q9Y4F4 1720 aa24.58■■□□□ 1.52
E2F4-202ENST00000561904 KIF24Q5T7B8 1368 aa24.57■■□□□ 1.52
E2F4-202ENST00000561904 MPRIPQ6WCQ1 1025 aa24.57■■□□□ 1.52
E2F4-202ENST00000561904 COL23A1Q86Y22 540 aaPredicted RBP24.56■■□□□ 1.52
E2F4-202ENST00000561904 C5P01031 1676 aa24.56■■□□□ 1.52
E2F4-202ENST00000561904 ZNF784Q8NCA9 323 aaPredicted RBP24.55■■□□□ 1.52
E2F4-202ENST00000561904 MAP2P11137 1827 aaKnown RBP24.55■■□□□ 1.52
E2F4-202ENST00000561904 PKD1L3Q7Z443 1732 aa24.55■■□□□ 1.52
E2F4-202ENST00000561904 ANKRD26Q9UPS8 1709 aa24.55■■□□□ 1.52
E2F4-202ENST00000561904 ITGB4P16144 1822 aa24.54■■□□□ 1.52
E2F4-202ENST00000561904 PALLDQ8WX93 1383 aa24.54■■□□□ 1.52
E2F4-202ENST00000561904 CHD4Q14839 1912 aa24.53■■□□□ 1.52
E2F4-202ENST00000561904 GPR162Q16538 588 aa24.53■■□□□ 1.52
E2F4-202ENST00000561904 MSL1Q68DK7 614 aa24.53■■□□□ 1.52
E2F4-202ENST00000561904 NLGN2Q8NFZ4 835 aa24.53■■□□□ 1.52
E2F4-202ENST00000561904 TIMELESSQ9UNS1 1208 aa24.53■■□□□ 1.52
E2F4-202ENST00000561904 PELP1Q8IZL8 1130 aaKnown RBP24.52■■□□□ 1.52
E2F4-202ENST00000561904 TAF1LQ8IZX4 1826 aa24.51■■□□□ 1.51
E2F4-202ENST00000561904 TNNT2P45379 298 aaPredicted RBP24.51■■□□□ 1.51
E2F4-202ENST00000561904 EYA1Q99502 592 aa24.5■■□□□ 1.51
E2F4-202ENST00000561904 NCAPD2Q15021 1401 aa24.5■■□□□ 1.51
E2F4-202ENST00000561904 POLKQ9UBT6 870 aa24.49■■□□□ 1.51
E2F4-202ENST00000561904 WASHC2AQ641Q2 1341 aa24.49■■□□□ 1.51
E2F4-202ENST00000561904 SMIM5Q71RC9 77 aa24.48■■□□□ 1.51
E2F4-202ENST00000561904 PIGBQ92521 554 aa24.48■■□□□ 1.51
E2F4-202ENST00000561904 AMIGO3Q86WK7 504 aa24.46■■□□□ 1.51
E2F4-202ENST00000561904 SPG7Q9UQ90 795 aa24.46■■□□□ 1.51
E2F4-202ENST00000561904 C4BP0C0L5 1744 aa24.45■■□□□ 1.5
E2F4-202ENST00000561904 CLSPNQ9HAW4 1339 aa24.44■■□□□ 1.5
E2F4-202ENST00000561904 HSPA5P11021 654 aaKnown RBP24.44■■□□□ 1.5
E2F4-202ENST00000561904 EIF4A2Q14240 407 aaKnown RBP24.43■■□□□ 1.5
E2F4-202ENST00000561904 NKX1-1Q15270 411 aaPredicted RBP24.43■■□□□ 1.5
E2F4-202ENST00000561904 SMARCC1Q92922 1105 aaPredicted RBP24.42■■□□□ 1.5
E2F4-202ENST00000561904 PHF14O94880 888 aa24.41■■□□□ 1.5
E2F4-202ENST00000561904 AK7Q96M32 723 aa24.41■■□□□ 1.5
E2F4-202ENST00000561904 PHKG2P15735 406 aa24.4■■□□□ 1.5
E2F4-202ENST00000561904 YBX3P16989 372 aaKnown RBP eCLIP24.4■■□□□ 1.53e-6■□□□□ 8.1
E2F4-202ENST00000561904 PANK3Q9H999 370 aa24.4■■□□□ 1.5
E2F4-202ENST00000561904 UBR3Q6ZT12 1888 aa24.4■■□□□ 1.5
E2F4-202ENST00000561904 EIF4G2P78344 907 aaKnown RBP eCLIP24.39■■□□□ 1.49
E2F4-202ENST00000561904 TMOD3Q9NYL9 352 aa24.39■■□□□ 1.49
E2F4-202ENST00000561904 ASAP1Q9ULH1 1129 aa24.39■■□□□ 1.49
E2F4-202ENST00000561904 LINC00116Q8NCU8 138 aa24.38■■□□□ 1.49
E2F4-202ENST00000561904 LOC102724428A0A0B4J2F2 783 aa24.37■■□□□ 1.49
E2F4-202ENST00000561904 SIK1P57059 783 aa24.37■■□□□ 1.49
E2F4-202ENST00000561904 IFNL2Q8IZJ0 200 aa24.37■■□□□ 1.49
E2F4-202ENST00000561904 FLAD1Q8NFF5 587 aa24.37■■□□□ 1.49
E2F4-202ENST00000561904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.37■■□□□ 1.49
E2F4-202ENST00000561904 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.35■■□□□ 1.49
E2F4-202ENST00000561904 ITPK1Q13572 414 aa24.35■■□□□ 1.49
E2F4-202ENST00000561904 CCER1Q8TC90 406 aaPredicted RBP24.33■■□□□ 1.49
E2F4-202ENST00000561904 ATG3Q9NT62 314 aa24.33■■□□□ 1.49
E2F4-202ENST00000561904 IGSF1Q8N6C5 1336 aa24.33■■□□□ 1.48
E2F4-202ENST00000561904 ATP6V1AP38606 617 aa24.32■■□□□ 1.48
E2F4-202ENST00000561904 HMGB2P26583 209 aaKnown RBP24.31■■□□□ 1.48
E2F4-202ENST00000561904 WWC3Q9ULE0 1092 aa24.31■■□□□ 1.48
E2F4-202ENST00000561904 GNPATO15228 680 aa24.3■■□□□ 1.48
E2F4-202ENST00000561904 CD2APQ9Y5K6 639 aa24.3■■□□□ 1.48
E2F4-202ENST00000561904 GRIN3BO60391 1043 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms