RNA–Protein interactions for RNA: ENST00000561702.5

SPG7-203, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-203ENST00000561702 NBPF4Q96M43 638 aa18.33■□□□□ 0.53
SPG7-203ENST00000561702 FAM83GA6ND36 823 aa18.33■□□□□ 0.52
SPG7-203ENST00000561702 ROBO1Q9Y6N7 1651 aa18.33■□□□□ 0.52
SPG7-203ENST00000561702 MTHFSDQ2M296 383 aaKnown RBP18.32■□□□□ 0.52
SPG7-203ENST00000561702 VIRMAQ69YN4 1812 aaKnown RBP18.32■□□□□ 0.52
SPG7-203ENST00000561702 ANKRD24Q8TF21 1146 aa18.32■□□□□ 0.52
SPG7-203ENST00000561702 FRAT1Q92837 279 aaPredicted RBP18.32■□□□□ 0.52
SPG7-203ENST00000561702 LRRC59Q96AG4 307 aaKnown RBP18.32■□□□□ 0.52
SPG7-203ENST00000561702 DCTN1Q14203 1278 aa18.31■□□□□ 0.52
SPG7-203ENST00000561702 COG6Q9Y2V7 657 aa18.31■□□□□ 0.52
SPG7-203ENST00000561702 NCAPD2Q15021 1401 aa18.31■□□□□ 0.52
SPG7-203ENST00000561702 ABCC6O95255 1503 aa18.3■□□□□ 0.52
SPG7-203ENST00000561702 CALD1Q05682 793 aaKnown RBP18.3■□□□□ 0.52
SPG7-203ENST00000561702 PANK1Q8TE04 598 aa18.3■□□□□ 0.52
SPG7-203ENST00000561702 LMO7Q8WWI1 1683 aa18.3■□□□□ 0.52
SPG7-203ENST00000561702 CPDO75976 1380 aa18.29■□□□□ 0.52
SPG7-203ENST00000561702 ZNF853P0CG23 659 aa18.29■□□□□ 0.52
SPG7-203ENST00000561702 EXOSC9Q06265 439 aaKnown RBP18.29■□□□□ 0.52
SPG7-203ENST00000561702 C8orf34Q49A92 452 aa18.29■□□□□ 0.52
SPG7-203ENST00000561702 GAS2L2Q8NHY3 880 aa18.28■□□□□ 0.52
SPG7-203ENST00000561702 IFT57Q9NWB7 429 aa18.28■□□□□ 0.52
SPG7-203ENST00000561702 KIAA0232Q92628 1395 aa18.28■□□□□ 0.52
SPG7-203ENST00000561702 ZKSCAN2Q63HK3 967 aa18.28■□□□□ 0.52
SPG7-203ENST00000561702 LAS1LQ9Y4W2 734 aaKnown RBP18.28■□□□□ 0.52
SPG7-203ENST00000561702 AHDC1Q5TGY3 1603 aaPredicted RBP18.27■□□□□ 0.52
SPG7-203ENST00000561702 ERBB3P21860 1342 aa18.27■□□□□ 0.52
SPG7-203ENST00000561702 IGHDP01880 384 aa18.27■□□□□ 0.52
SPG7-203ENST00000561702 GNAI1P63096 354 aa18.27■□□□□ 0.51
SPG7-203ENST00000561702 CHRNA2Q15822 529 aa18.27■□□□□ 0.51
SPG7-203ENST00000561702 RTL5Q5HYW3 569 aaPredicted RBP18.27■□□□□ 0.51
SPG7-203ENST00000561702 MCM10Q7L590 875 aa18.27■□□□□ 0.51
SPG7-203ENST00000561702 SKAP1Q86WV1 359 aa18.27■□□□□ 0.51
SPG7-203ENST00000561702 FAM208AQ9UK61 1670 aaKnown RBP18.26■□□□□ 0.51
SPG7-203ENST00000561702 RGS3P49796 1198 aa18.26■□□□□ 0.51
SPG7-203ENST00000561702 LRRC37A3O60309 1634 aa18.25■□□□□ 0.51
SPG7-203ENST00000561702 CFAP44Q96MT7 982 aa18.25■□□□□ 0.51
SPG7-203ENST00000561702 MBIPQ9NS73 344 aa18.25■□□□□ 0.51
SPG7-203ENST00000561702 USP35Q9P2H5 1018 aa18.25■□□□□ 0.51
SPG7-203ENST00000561702 RWDD1Q9H446 243 aaPredicted RBP18.25■□□□□ 0.51
SPG7-203ENST00000561702 CRB1P82279 1406 aa18.24■□□□□ 0.51
SPG7-203ENST00000561702 MVPQ14764 893 aaKnown RBP18.24■□□□□ 0.51
SPG7-203ENST00000561702 ZNF428Q96B54 188 aa18.24■□□□□ 0.51
SPG7-203ENST00000561702 DZIP1LQ8IYY4 767 aaKnown RBP18.23■□□□□ 0.51
SPG7-203ENST00000561702 FTSJ3Q8IY81 847 aaKnown RBP18.23■□□□□ 0.51
SPG7-203ENST00000561702 MAP3K5Q99683 1374 aa18.22■□□□□ 0.51
SPG7-203ENST00000561702 HTATSF1O43719 755 aaKnown RBP18.22■□□□□ 0.51
SPG7-203ENST00000561702 NBR1Q14596 966 aa18.22■□□□□ 0.51
SPG7-203ENST00000561702 RTF1Q92541 710 aaKnown RBP18.22■□□□□ 0.51
SPG7-203ENST00000561702 DAXXQ9UER7 740 aaPredicted RBP18.22■□□□□ 0.51
SPG7-203ENST00000561702 GNAT3A8MTJ3 354 aa18.22■□□□□ 0.51
SPG7-203ENST00000561702 RLBP1P12271 317 aa18.21■□□□□ 0.51
SPG7-203ENST00000561702 BCL2L13Q9BXK5 485 aa18.21■□□□□ 0.51
SPG7-203ENST00000561702 SMC4Q9NTJ3 1288 aa18.21■□□□□ 0.51
SPG7-203ENST00000561702 KIF16BQ96L93 1317 aa18.21■□□□□ 0.51
SPG7-203ENST00000561702 IPO8O15397 1037 aaKnown RBP18.2■□□□□ 0.5
SPG7-203ENST00000561702 ALDH1L2Q3SY69 923 aa18.2■□□□□ 0.5
SPG7-203ENST00000561702 PRDM11Q9NQV5 511 aa18.2■□□□□ 0.5
SPG7-203ENST00000561702 CHL1O00533 1208 aa18.2■□□□□ 0.5
SPG7-203ENST00000561702 PHLPP1O60346 1717 aa18.2■□□□□ 0.5
SPG7-203ENST00000561702 HAP1P54257 671 aaPredicted RBP18.2■□□□□ 0.5
SPG7-203ENST00000561702 DDX19BQ9UMR2 479 aa18.2■□□□□ 0.5
SPG7-203ENST00000561702 COL22A1Q8NFW1 1626 aaPredicted RBP18.19■□□□□ 0.5
SPG7-203ENST00000561702 NLRP2Q9NX02 1062 aa18.19■□□□□ 0.5
SPG7-203ENST00000561702 PLEKHO1Q53GL0 409 aaPredicted RBP18.18■□□□□ 0.5
SPG7-203ENST00000561702 TSPYL6Q8N831 410 aa18.18■□□□□ 0.5
SPG7-203ENST00000561702 PCDHB15Q9Y5E8 787 aa18.18■□□□□ 0.5
SPG7-203ENST00000561702 CSB-PGBD3P0DP91 1061 aa18.18■□□□□ 0.5
SPG7-203ENST00000561702 ATF7IPQ6VMQ6 1270 aa18.18■□□□□ 0.5
SPG7-203ENST00000561702 IL17REQ8NFR9 667 aa18.18■□□□□ 0.5
SPG7-203ENST00000561702 SSH1Q8WYL5 1049 aa18.18■□□□□ 0.5
SPG7-203ENST00000561702 COL16A1Q07092 1604 aaPredicted RBP18.17■□□□□ 0.5
SPG7-203ENST00000561702 VAMP4O75379 141 aa18.17■□□□□ 0.5
SPG7-203ENST00000561702 BRPF1P55201 1214 aaPredicted RBP18.17■□□□□ 0.5
SPG7-203ENST00000561702 AMOTQ4VCS5 1084 aa18.16■□□□□ 0.5
SPG7-203ENST00000561702 C8orf58Q8NAV2 365 aa18.16■□□□□ 0.5
SPG7-203ENST00000561702 COL5A2P05997 1499 aaPredicted RBP18.16■□□□□ 0.5
SPG7-203ENST00000561702 ZNF530Q6P9A1 599 aaPredicted RBP18.16■□□□□ 0.5
SPG7-203ENST00000561702 MEGF6O75095 1541 aa18.15■□□□□ 0.5
SPG7-203ENST00000561702 TRIM27P14373 513 aa18.15■□□□□ 0.5
SPG7-203ENST00000561702 HDAC1Q13547 482 aaPredicted RBP18.15■□□□□ 0.5
SPG7-203ENST00000561702 CHMP4BQ9H444 224 aaKnown RBP18.15■□□□□ 0.5
SPG7-203ENST00000561702 MIS18AQ9NYP9 233 aa18.15■□□□□ 0.5
SPG7-203ENST00000561702 CEMIPQ8WUJ3 1361 aa18.14■□□□□ 0.49
SPG7-203ENST00000561702 ELL2O00472 640 aaPredicted RBP18.14■□□□□ 0.49
SPG7-203ENST00000561702 TOM1O60784 492 aa18.14■□□□□ 0.49
SPG7-203ENST00000561702 DEKP35659 375 aaKnown RBP18.14■□□□□ 0.49
SPG7-203ENST00000561702 TWISTNBQ3B726 338 aaPredicted RBP18.14■□□□□ 0.49
SPG7-203ENST00000561702 AKAP4Q5JQC9 854 aa18.14■□□□□ 0.49
SPG7-203ENST00000561702 TNNQ9UQP3 1299 aa18.14■□□□□ 0.49
SPG7-203ENST00000561702 WDR17Q8IZU2 1322 aa18.13■□□□□ 0.49
SPG7-203ENST00000561702 PKD1L3Q7Z443 1732 aa18.13■□□□□ 0.49
SPG7-203ENST00000561702 KRT24Q2M2I5 525 aa18.13■□□□□ 0.49
SPG7-203ENST00000561702 RAPGEF4Q8WZA2 1011 aa18.13■□□□□ 0.49
SPG7-203ENST00000561702 TSPYL4Q9UJ04 414 aa18.13■□□□□ 0.49
SPG7-203ENST00000561702 ADAMTS7Q9UKP4 1686 aa18.12■□□□□ 0.49
SPG7-203ENST00000561702 PIP4K2BP78356 416 aa18.12■□□□□ 0.49
SPG7-203ENST00000561702 LGR6Q9HBX8 967 aa18.12■□□□□ 0.49
SPG7-203ENST00000561702 PDZRN3Q9UPQ7 1066 aa18.12■□□□□ 0.49
SPG7-203ENST00000561702 TATP17735 454 aaPredicted RBP18.11■□□□□ 0.49
SPG7-203ENST00000561702 UPF2Q9HAU5 1272 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms