RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 SYNJ2O15056 1496 aa14.88□□□□□ -0.03
SYNM-203ENST00000560674 SEPT7Q16181 437 aaKnown RBP14.88□□□□□ -0.03
SYNM-203ENST00000560674 ANKRD30BQ9BXX2 1392 aa14.87□□□□□ -0.03
SYNM-203ENST00000560674 HSP90AB3PQ58FF7 597 aa14.87□□□□□ -0.03
SYNM-203ENST00000560674 TMEM57Q8N5G2 664 aa14.87□□□□□ -0.03
SYNM-203ENST00000560674 FCHSD2O94868 740 aa14.87□□□□□ -0.03
SYNM-203ENST00000560674 MYL6BP14649 208 aa14.87□□□□□ -0.03
SYNM-203ENST00000560674 ATP2B2Q01814 1243 aa14.87□□□□□ -0.03
SYNM-203ENST00000560674 WWC2Q6AWC2 1192 aa14.87□□□□□ -0.03
SYNM-203ENST00000560674 PLCD4Q9BRC7 762 aa14.87□□□□□ -0.03
SYNM-203ENST00000560674 CASTP20810 708 aaKnown RBP14.87□□□□□ -0.03
SYNM-203ENST00000560674 PDCL2Q8N4E4 241 aa14.86□□□□□ -0.03
SYNM-203ENST00000560674 CENPHQ9H3R5 247 aa14.86□□□□□ -0.03
SYNM-203ENST00000560674 ANKRD18AQ8IVF6 992 aa14.86□□□□□ -0.03
SYNM-203ENST00000560674 WASF1Q92558 559 aa14.86□□□□□ -0.03
SYNM-203ENST00000560674 AQRO60306 1485 aaKnown RBP eCLIP14.86□□□□□ -0.03
SYNM-203ENST00000560674 FAM193AP78312 1265 aa14.86□□□□□ -0.03
SYNM-203ENST00000560674 UBAC1Q9BSL1 405 aa14.86□□□□□ -0.03
SYNM-203ENST00000560674 EPB41L2O43491 1005 aaKnown RBP14.86□□□□□ -0.03
SYNM-203ENST00000560674 ENOX2Q16206 610 aaKnown RBP14.85□□□□□ -0.03
SYNM-203ENST00000560674 UBXN4Q92575 508 aa14.85□□□□□ -0.03
SYNM-203ENST00000560674 SPG7Q9UQ90 795 aa14.85□□□□□ -0.03
SYNM-203ENST00000560674 RTEL1-TNFRSF6BF6WH68 1400 aa14.85□□□□□ -0.03
SYNM-203ENST00000560674 CCDC102AQ96A19 550 aa14.85□□□□□ -0.03
SYNM-203ENST00000560674 MPHOSPH8Q99549 860 aa14.85□□□□□ -0.03
SYNM-203ENST00000560674 HMGXB3Q12766 1538 aa14.85□□□□□ -0.03
SYNM-203ENST00000560674 BMP2KQ9NSY1 1161 aaPredicted RBP14.85□□□□□ -0.03
SYNM-203ENST00000560674 UNC13AQ9UPW8 1703 aa14.85□□□□□ -0.03
SYNM-203ENST00000560674 KIF2AO00139 706 aaPredicted RBP14.85□□□□□ -0.03
SYNM-203ENST00000560674 NFE2L2Q16236 605 aa14.85□□□□□ -0.03
SYNM-203ENST00000560674 ARHGAP29Q52LW3 1261 aa14.85□□□□□ -0.03
SYNM-203ENST00000560674 TDO2P48775 406 aa14.84□□□□□ -0.03
SYNM-203ENST00000560674 KLHL34Q8N239 644 aa14.84□□□□□ -0.03
SYNM-203ENST00000560674 CEP126Q9P2H0 1117 aa14.84□□□□□ -0.03
SYNM-203ENST00000560674 LRRFIP2Q9Y608 721 aaKnown RBP14.84□□□□□ -0.03
SYNM-203ENST00000560674 CFAP100Q494V2 611 aa14.84□□□□□ -0.03
SYNM-203ENST00000560674 KRI1Q8N9T8 703 aaKnown RBP14.84□□□□□ -0.03
SYNM-203ENST00000560674 PLEKHH2Q8IVE3 1493 aa14.84□□□□□ -0.03
SYNM-203ENST00000560674 ATAD2Q6PL18 1390 aa14.84□□□□□ -0.03
SYNM-203ENST00000560674 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
SYNM-203ENST00000560674 USP8P40818 1118 aa14.84□□□□□ -0.03
SYNM-203ENST00000560674 TMPOP42166 694 aaKnown RBP14.84□□□□□ -0.03
SYNM-203ENST00000560674 KIAA1328Q86T90 577 aa14.84□□□□□ -0.03
SYNM-203ENST00000560674 TAX1BP1Q86VP1 789 aa14.84□□□□□ -0.03
SYNM-203ENST00000560674 EFCAB5A4FU69 1503 aa14.83□□□□□ -0.03
SYNM-203ENST00000560674 ANKRD62A6NC57 917 aa14.83□□□□□ -0.03
SYNM-203ENST00000560674 NUTM1Q86Y26 1132 aa14.83□□□□□ -0.03
SYNM-203ENST00000560674 DDX11Q96FC9 970 aa14.83□□□□□ -0.03
SYNM-203ENST00000560674 STRN4Q9NRL3 753 aa14.83□□□□□ -0.03
SYNM-203ENST00000560674 WDR97A6NE52 1622 aa14.83□□□□□ -0.03
SYNM-203ENST00000560674 CAMK4Q16566 473 aa14.83□□□□□ -0.04
SYNM-203ENST00000560674 EIF5P55010 431 aaKnown RBP14.83□□□□□ -0.04
SYNM-203ENST00000560674 CEP131Q9UPN4 1083 aa14.83□□□□□ -0.04
SYNM-203ENST00000560674 BTBD11A6QL63 1104 aa14.83□□□□□ -0.04
SYNM-203ENST00000560674 IMMTQ16891 758 aaKnown RBP14.82□□□□□ -0.04
SYNM-203ENST00000560674 MX1P20591 662 aa14.82□□□□□ -0.04
SYNM-203ENST00000560674 CCDC183Q5T5S1 534 aa14.82□□□□□ -0.04
SYNM-203ENST00000560674 CCDC148Q8NFR7 591 aa14.82□□□□□ -0.04
SYNM-203ENST00000560674 EXOC6BQ9Y2D4 811 aa14.82□□□□□ -0.04
SYNM-203ENST00000560674 CCDC83Q8IWF9 413 aa14.82□□□□□ -0.04
SYNM-203ENST00000560674 SSBP05455 408 aaKnown RBP eCLIP14.82□□□□□ -0.04
SYNM-203ENST00000560674 TMCO3Q6UWJ1 677 aa14.82□□□□□ -0.04
SYNM-203ENST00000560674 TAF4BQ92750 862 aa14.82□□□□□ -0.04
SYNM-203ENST00000560674 SFPQP23246 707 aaKnown RBP eCLIP14.82□□□□□ -0.04
SYNM-203ENST00000560674 PTPN14Q15678 1187 aa14.82□□□□□ -0.04
SYNM-203ENST00000560674 GBP3Q9H0R5 595 aa14.82□□□□□ -0.04
SYNM-203ENST00000560674 SEPT11Q9NVA2 429 aaKnown RBP14.82□□□□□ -0.04
SYNM-203ENST00000560674 NSD3Q9BZ95 1437 aa14.81□□□□□ -0.04
SYNM-203ENST00000560674 RRS1Q15050 365 aaKnown RBP14.81□□□□□ -0.04
SYNM-203ENST00000560674 KIF1BPQ96EK5 621 aa14.81□□□□□ -0.04
SYNM-203ENST00000560674 ERICH4A6NGS2 130 aa14.81□□□□□ -0.04
SYNM-203ENST00000560674 PROSER2Q86WR7 435 aaPredicted RBP14.81□□□□□ -0.04
SYNM-203ENST00000560674 PAF1Q8N7H5 531 aa14.81□□□□□ -0.04
SYNM-203ENST00000560674 FERMT3Q86UX7 667 aa14.81□□□□□ -0.04
SYNM-203ENST00000560674 RAB11FIP3O75154 756 aa14.81□□□□□ -0.04
SYNM-203ENST00000560674 ZSCAN12O43309 604 aa14.8□□□□□ -0.04
SYNM-203ENST00000560674 GLRX3O76003 335 aaKnown RBP14.8□□□□□ -0.04
SYNM-203ENST00000560674 ANO10Q9NW15 660 aa14.8□□□□□ -0.04
SYNM-203ENST00000560674 GRIN2BQ13224 1484 aa14.8□□□□□ -0.04
SYNM-203ENST00000560674 SCAND2PQ9GZW5 306 aaPredicted RBP14.8□□□□□ -0.04
SYNM-203ENST00000560674 SLC52A1Q9NWF4 448 aa14.8□□□□□ -0.04
SYNM-203ENST00000560674 PLEKHH1Q9ULM0 1364 aa14.8□□□□□ -0.04
SYNM-203ENST00000560674 RPGRIP1LQ68CZ1 1315 aa14.8□□□□□ -0.04
SYNM-203ENST00000560674 PRPF40BQ6NWY9 871 aaKnown RBP14.79□□□□□ -0.04
SYNM-203ENST00000560674 TOM1L2Q6ZVM7 507 aa14.79□□□□□ -0.04
SYNM-203ENST00000560674 ZNF397Q8NF99 534 aaPredicted RBP14.79□□□□□ -0.04
SYNM-203ENST00000560674 DDX54Q8TDD1 881 aaKnown RBP14.79□□□□□ -0.04
SYNM-203ENST00000560674 POLA1P09884 1462 aaPredicted RBP14.79□□□□□ -0.04
SYNM-203ENST00000560674 TIAM1Q13009 1591 aa14.79□□□□□ -0.04
SYNM-203ENST00000560674 RAI14Q9P0K7 980 aa14.79□□□□□ -0.04
SYNM-203ENST00000560674 JAKMIP3Q5VZ66 844 aa14.79□□□□□ -0.04
SYNM-203ENST00000560674 DAPK1P53355 1430 aa14.79□□□□□ -0.04
SYNM-203ENST00000560674 ALDH1L2Q3SY69 923 aa14.79□□□□□ -0.04
SYNM-203ENST00000560674 CRACR2AQ9BSW2 395 aa14.79□□□□□ -0.04
SYNM-203ENST00000560674 SH2B1Q9NRF2 756 aaPredicted RBP14.79□□□□□ -0.04
SYNM-203ENST00000560674 U3KPZ7 1027 aaPredicted RBP14.79□□□□□ -0.04
SYNM-203ENST00000560674 BIVM-ERCC5R4GMW8 1640 aa14.78□□□□□ -0.04
SYNM-203ENST00000560674 TAF3Q5VWG9 929 aa14.78□□□□□ -0.04
SYNM-203ENST00000560674 KIF18AQ8NI77 898 aa14.78□□□□□ -0.04
SYNM-203ENST00000560674 AIDAQ96BJ3 306 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms