RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 PAPPAQ13219 1627 aa19.38■□□□□ 0.69
TNFAIP2-207ENST00000560562 PKD1L3Q7Z443 1732 aa19.38■□□□□ 0.69
TNFAIP2-207ENST00000560562 SMG6Q86US8 1419 aaKnown RBP19.37■□□□□ 0.69
TNFAIP2-207ENST00000560562 PANK3Q9H999 370 aa19.37■□□□□ 0.69
TNFAIP2-207ENST00000560562 NCAPD2Q15021 1401 aa19.37■□□□□ 0.69
TNFAIP2-207ENST00000560562 DDX54Q8TDD1 881 aaKnown RBP19.36■□□□□ 0.69
TNFAIP2-207ENST00000560562 TOGARAM1Q9Y4F4 1720 aa19.36■□□□□ 0.69
TNFAIP2-207ENST00000560562 POLKQ9UBT6 870 aa19.34■□□□□ 0.69
TNFAIP2-207ENST00000560562 LY75O60449 1722 aa19.34■□□□□ 0.69
TNFAIP2-207ENST00000560562 TXNRD1Q16881 649 aa19.34■□□□□ 0.69
TNFAIP2-207ENST00000560562 NBPF14Q5TI25 921 aa19.34■□□□□ 0.69
TNFAIP2-207ENST00000560562 ITGB4P16144 1822 aa19.33■□□□□ 0.69
TNFAIP2-207ENST00000560562 NSD2O96028 1365 aa19.33■□□□□ 0.69
TNFAIP2-207ENST00000560562 KIF7Q2M1P5 1343 aa19.33■□□□□ 0.68
TNFAIP2-207ENST00000560562 TUBGCP6Q96RT7 1819 aa19.33■□□□□ 0.68
TNFAIP2-207ENST00000560562 PPM1GO15355 546 aaPredicted RBP19.33■□□□□ 0.68
TNFAIP2-207ENST00000560562 ZCRB1Q8TBF4 217 aaKnown RBP19.33■□□□□ 0.68
TNFAIP2-207ENST00000560562 WASHC2AQ641Q2 1341 aa19.32■□□□□ 0.68
TNFAIP2-207ENST00000560562 TNNT2P45379 298 aaPredicted RBP19.32■□□□□ 0.68
TNFAIP2-207ENST00000560562 PDGFDQ9GZP0 370 aaPredicted RBP19.32■□□□□ 0.68
TNFAIP2-207ENST00000560562 RAPGEF4Q8WZA2 1011 aa19.28■□□□□ 0.68
TNFAIP2-207ENST00000560562 TATP17735 454 aaPredicted RBP19.27■□□□□ 0.68
TNFAIP2-207ENST00000560562 PRIM1P49642 420 aaKnown RBP19.27■□□□□ 0.68
TNFAIP2-207ENST00000560562 EYA1Q99502 592 aa19.27■□□□□ 0.68
TNFAIP2-207ENST00000560562 LRRC4BQ9NT99 713 aa19.27■□□□□ 0.68
TNFAIP2-207ENST00000560562 QSER1Q2KHR3 1735 aa19.26■□□□□ 0.67
TNFAIP2-207ENST00000560562 CYP27B1O15528 508 aa19.25■□□□□ 0.67
TNFAIP2-207ENST00000560562 EIF4A2Q14240 407 aaKnown RBP19.25■□□□□ 0.67
TNFAIP2-207ENST00000560562 TAF1LQ8IZX4 1826 aa19.25■□□□□ 0.67
TNFAIP2-207ENST00000560562 SYTL4Q96C24 671 aaPredicted RBP19.25■□□□□ 0.67
TNFAIP2-207ENST00000560562 SLC15A2Q16348 729 aa19.24■□□□□ 0.67
TNFAIP2-207ENST00000560562 AMER1Q5JTC6 1135 aaPredicted RBP19.24■□□□□ 0.67
TNFAIP2-207ENST00000560562 PCDH11XQ9BZA7 1347 aa19.23■□□□□ 0.67
TNFAIP2-207ENST00000560562 PCDH11YQ9BZA8 1340 aa19.23■□□□□ 0.67
TNFAIP2-207ENST00000560562 KCNQ4P56696 695 aa19.23■□□□□ 0.67
TNFAIP2-207ENST00000560562 ZNF827Q17R98 1081 aa19.23■□□□□ 0.67
TNFAIP2-207ENST00000560562 STK32BQ9NY57 414 aa19.22■□□□□ 0.67
TNFAIP2-207ENST00000560562 C5P01031 1676 aa19.21■□□□□ 0.67
TNFAIP2-207ENST00000560562 MORC1Q86VD1 984 aa19.21■□□□□ 0.67
TNFAIP2-207ENST00000560562 KNSTRNQ9Y448 316 aa19.21■□□□□ 0.67
TNFAIP2-207ENST00000560562 PER1O15534 1290 aaPredicted RBP19.2■□□□□ 0.66
TNFAIP2-207ENST00000560562 IGSF1Q8N6C5 1336 aa19.2■□□□□ 0.66
TNFAIP2-207ENST00000560562 ZBTB7AO95365 584 aa19.19■□□□□ 0.66
TNFAIP2-207ENST00000560562 SPON1Q9HCB6 807 aa19.19■□□□□ 0.66
TNFAIP2-207ENST00000560562 COL24A1Q17RW2 1714 aa19.19■□□□□ 0.66
TNFAIP2-207ENST00000560562 AKT1S1Q96B36 256 aa19.17■□□□□ 0.66
TNFAIP2-207ENST00000560562 UTRNP46939 3433 aa19.17■□□□□ 0.66
TNFAIP2-207ENST00000560562 PTGER2P43116 358 aa19.17■□□□□ 0.66
TNFAIP2-207ENST00000560562 SLC27A3Q5K4L6 730 aa19.17■□□□□ 0.66
TNFAIP2-207ENST00000560562 VIRMAQ69YN4 1812 aaKnown RBP19.16■□□□□ 0.66
TNFAIP2-207ENST00000560562 NKX1-1Q15270 411 aaPredicted RBP19.16■□□□□ 0.66
TNFAIP2-207ENST00000560562 AEBP1Q8IUX7 1158 aa19.15■□□□□ 0.66
TNFAIP2-207ENST00000560562 ATF5Q9Y2D1 282 aaPredicted RBP19.15■□□□□ 0.66
TNFAIP2-207ENST00000560562 MPRIPQ6WCQ1 1025 aa19.14■□□□□ 0.65
TNFAIP2-207ENST00000560562 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.14■□□□□ 0.65
TNFAIP2-207ENST00000560562 SPG7Q9UQ90 795 aa19.14■□□□□ 0.65
TNFAIP2-207ENST00000560562 PHKG2P15735 406 aa19.13■□□□□ 0.65
TNFAIP2-207ENST00000560562 SGIP1Q9BQI5 828 aa19.13■□□□□ 0.65
TNFAIP2-207ENST00000560562 CCNL1Q9UK58 526 aaPredicted RBP19.13■□□□□ 0.65
TNFAIP2-207ENST00000560562 PALLDQ8WX93 1383 aa19.12■□□□□ 0.65
TNFAIP2-207ENST00000560562 UBR3Q6ZT12 1888 aa19.12■□□□□ 0.65
TNFAIP2-207ENST00000560562 PNPLA7Q6ZV29 1317 aa19.12■□□□□ 0.65
TNFAIP2-207ENST00000560562 CC2D1BQ5T0F9 858 aaKnown RBP19.12■□□□□ 0.65
TNFAIP2-207ENST00000560562 PIGBQ92521 554 aa19.12■□□□□ 0.65
TNFAIP2-207ENST00000560562 PLEKHG2Q9H7P9 1386 aa19.12■□□□□ 0.65
TNFAIP2-207ENST00000560562 GOLGB1Q14789 3259 aaKnown RBP19.11■□□□□ 0.65
TNFAIP2-207ENST00000560562 C4BP0C0L5 1744 aa19.11■□□□□ 0.65
TNFAIP2-207ENST00000560562 IL13P35225 146 aa19.11■□□□□ 0.65
TNFAIP2-207ENST00000560562 MTFR1LQ9H019 292 aa19.1■□□□□ 0.65
TNFAIP2-207ENST00000560562 PPP1R1BQ9UD71 204 aaPredicted RBP19.1■□□□□ 0.65
TNFAIP2-207ENST00000560562 SCN11AQ9UI33 1791 aa19.1■□□□□ 0.65
TNFAIP2-207ENST00000560562 KDRP35968 1356 aa19.1■□□□□ 0.65
TNFAIP2-207ENST00000560562 IFNL2Q8IZJ0 200 aa19.09■□□□□ 0.65
TNFAIP2-207ENST00000560562 KDM6AO15550 1401 aaPredicted RBP19.09■□□□□ 0.65
TNFAIP2-207ENST00000560562 COL3A1P02461 1466 aaPredicted RBP19.09■□□□□ 0.65
TNFAIP2-207ENST00000560562 MTHFSP49914 203 aa19.08■□□□□ 0.65
TNFAIP2-207ENST00000560562 NPC1L1Q9UHC9 1359 aa19.08■□□□□ 0.65
TNFAIP2-207ENST00000560562 CNGB1Q14028 1251 aaPredicted RBP19.07■□□□□ 0.64
TNFAIP2-207ENST00000560562 SULT6B1Q6IMI4 303 aa19.07■□□□□ 0.64
TNFAIP2-207ENST00000560562 ZEB1P37275 1124 aaPredicted RBP19.06■□□□□ 0.64
TNFAIP2-207ENST00000560562 TFCP2L1Q9NZI6 479 aa19.06■□□□□ 0.64
TNFAIP2-207ENST00000560562 AMIGO3Q86WK7 504 aa19.05■□□□□ 0.64
TNFAIP2-207ENST00000560562 ASAP1Q9ULH1 1129 aa19.05■□□□□ 0.64
TNFAIP2-207ENST00000560562 COL5A3P25940 1745 aaPredicted RBP19.05■□□□□ 0.64
TNFAIP2-207ENST00000560562 ZNF530Q6P9A1 599 aaPredicted RBP19.04■□□□□ 0.64
TNFAIP2-207ENST00000560562 TMOD3Q9NYL9 352 aa19.04■□□□□ 0.64
TNFAIP2-207ENST00000560562 ZNF831Q5JPB2 1677 aa19.04■□□□□ 0.64
TNFAIP2-207ENST00000560562 PLEKHO1Q53GL0 409 aaPredicted RBP19.03■□□□□ 0.64
TNFAIP2-207ENST00000560562 COL23A1Q86Y22 540 aaPredicted RBP19.02■□□□□ 0.64
TNFAIP2-207ENST00000560562 SMARCC1Q92922 1105 aaPredicted RBP19.02■□□□□ 0.64
TNFAIP2-207ENST00000560562 FHDC1Q9C0D6 1143 aaPredicted RBP19.02■□□□□ 0.64
TNFAIP2-207ENST00000560562 ATG3Q9NT62 314 aa19.02■□□□□ 0.64
TNFAIP2-207ENST00000560562 MYH14Q7Z406 1995 aaKnown RBP19.02■□□□□ 0.64
TNFAIP2-207ENST00000560562 ADAMTS7Q9UKP4 1686 aa19.02■□□□□ 0.63
TNFAIP2-207ENST00000560562 SMIM5Q71RC9 77 aa19.01■□□□□ 0.63
TNFAIP2-207ENST00000560562 LOC102724428A0A0B4J2F2 783 aa19■□□□□ 0.63
TNFAIP2-207ENST00000560562 HMOX1P09601 288 aa19■□□□□ 0.63
TNFAIP2-207ENST00000560562 SIK1P57059 783 aa19■□□□□ 0.63
TNFAIP2-207ENST00000560562 ITPK1Q13572 414 aa19■□□□□ 0.63
TNFAIP2-207ENST00000560562 AMOTQ4VCS5 1084 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms