RNA–Protein interactions for RNA: ENST00000560046.1

DCAF11-227, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 3

Gene DCAF11, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-227ENST00000560046 NFAT5O94916 1531 aa13.59□□□□□ -0.23
DCAF11-227ENST00000560046 IPO8O15397 1037 aaKnown RBP13.59□□□□□ -0.23
DCAF11-227ENST00000560046 TRIM27P14373 513 aa13.59□□□□□ -0.23
DCAF11-227ENST00000560046 BRINP3Q76B58 766 aa13.59□□□□□ -0.23
DCAF11-227ENST00000560046 THUMPD2Q9BTF0 503 aaKnown RBP13.59□□□□□ -0.23
DCAF11-227ENST00000560046 MBIPQ9NS73 344 aa13.59□□□□□ -0.23
DCAF11-227ENST00000560046 TRPC5Q9UL62 973 aaPredicted RBP13.59□□□□□ -0.23
DCAF11-227ENST00000560046 LRRC37A3O60309 1634 aa13.59□□□□□ -0.23
DCAF11-227ENST00000560046 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
DCAF11-227ENST00000560046 NLRP6P59044 892 aa13.58□□□□□ -0.24
DCAF11-227ENST00000560046 ARHGAP45Q92619 1136 aa13.58□□□□□ -0.24
DCAF11-227ENST00000560046 NOB1Q9ULX3 412 aaKnown RBP13.58□□□□□ -0.24
DCAF11-227ENST00000560046 PCDHB15Q9Y5E8 787 aa13.58□□□□□ -0.24
DCAF11-227ENST00000560046 ATF3P18847 181 aa13.57□□□□□ -0.24
DCAF11-227ENST00000560046 AMPHP49418 695 aa13.57□□□□□ -0.24
DCAF11-227ENST00000560046 C14orf37Q86TY3 774 aa13.57□□□□□ -0.24
DCAF11-227ENST00000560046 SKAP1Q86WV1 359 aa13.57□□□□□ -0.24
DCAF11-227ENST00000560046 FTSJ3Q8IY81 847 aaKnown RBP13.57□□□□□ -0.24
DCAF11-227ENST00000560046 MRPL50Q8N5N7 158 aaKnown RBP13.57□□□□□ -0.24
DCAF11-227ENST00000560046 DDX19BQ9UMR2 479 aa13.57□□□□□ -0.24
DCAF11-227ENST00000560046 KIAA0232Q92628 1395 aa13.57□□□□□ -0.24
DCAF11-227ENST00000560046 CRB1P82279 1406 aa13.56□□□□□ -0.24
DCAF11-227ENST00000560046 HOXC9P31274 260 aa13.56□□□□□ -0.24
DCAF11-227ENST00000560046 LRRC59Q96AG4 307 aaKnown RBP13.56□□□□□ -0.24
DCAF11-227ENST00000560046 RWDD1Q9H446 243 aaPredicted RBP13.56□□□□□ -0.24
DCAF11-227ENST00000560046 C19orf44Q9H6X5 657 aa13.56□□□□□ -0.24
DCAF11-227ENST00000560046 LAS1LQ9Y4W2 734 aaKnown RBP13.56□□□□□ -0.24
DCAF11-227ENST00000560046 ATRNO75882 1429 aa13.56□□□□□ -0.24
DCAF11-227ENST00000560046 BCL9LQ86UU0 1499 aa13.55□□□□□ -0.24
DCAF11-227ENST00000560046 SLIT3O75094 1523 aa13.55□□□□□ -0.24
DCAF11-227ENST00000560046 CACNA1FO60840 1977 aa13.55□□□□□ -0.24
DCAF11-227ENST00000560046 CHL1O00533 1208 aa13.55□□□□□ -0.24
DCAF11-227ENST00000560046 ANP32AP39687 249 aaKnown RBP13.55□□□□□ -0.24
DCAF11-227ENST00000560046 EYA1Q99502 592 aa13.55□□□□□ -0.24
DCAF11-227ENST00000560046 USP21Q9UK80 565 aa13.55□□□□□ -0.24
DCAF11-227ENST00000560046 FAM83GA6ND36 823 aa13.54□□□□□ -0.24
DCAF11-227ENST00000560046 FAM161AQ3B820 660 aa13.54□□□□□ -0.24
DCAF11-227ENST00000560046 TSPYL6Q8N831 410 aa13.54□□□□□ -0.24
DCAF11-227ENST00000560046 ABTB2Q8N961 1025 aa13.54□□□□□ -0.24
DCAF11-227ENST00000560046 ANP32EQ9BTT0 268 aa13.54□□□□□ -0.24
DCAF11-227ENST00000560046 MST1RQ04912 1400 aa13.54□□□□□ -0.24
DCAF11-227ENST00000560046 HTATSF1O43719 755 aaKnown RBP13.53□□□□□ -0.24
DCAF11-227ENST00000560046 HDAC1Q13547 482 aaPredicted RBP13.53□□□□□ -0.24
DCAF11-227ENST00000560046 TWISTNBQ3B726 338 aaPredicted RBP13.53□□□□□ -0.24
DCAF11-227ENST00000560046 DEFB132Q7Z7B7 95 aa13.53□□□□□ -0.24
DCAF11-227ENST00000560046 TMEM57Q8N5G2 664 aa13.53□□□□□ -0.24
DCAF11-227ENST00000560046 C8orf58Q8NAV2 365 aa13.53□□□□□ -0.24
DCAF11-227ENST00000560046 IPO9Q96P70 1041 aaKnown RBP13.53□□□□□ -0.24
DCAF11-227ENST00000560046 SOX12O15370 315 aa13.52□□□□□ -0.25
DCAF11-227ENST00000560046 ADAMTS2O95450 1211 aa13.52□□□□□ -0.25
DCAF11-227ENST00000560046 HAP1P54257 671 aaPredicted RBP13.52□□□□□ -0.25
DCAF11-227ENST00000560046 DCTN1Q14203 1278 aa13.52□□□□□ -0.25
DCAF11-227ENST00000560046 C8orf34Q49A92 452 aa13.52□□□□□ -0.25
DCAF11-227ENST00000560046 GAS2L2Q8NHY3 880 aa13.52□□□□□ -0.25
DCAF11-227ENST00000560046 ZBTB40Q9NUA8 1239 aa13.52□□□□□ -0.25
DCAF11-227ENST00000560046 ABCC4O15439 1325 aa13.52□□□□□ -0.25
DCAF11-227ENST00000560046 ALS2Q96Q42 1657 aa13.52□□□□□ -0.25
DCAF11-227ENST00000560046 RGPD2P0DJD1 1756 aa13.51□□□□□ -0.25
DCAF11-227ENST00000560046 CAMTA1Q9Y6Y1 1673 aa13.51□□□□□ -0.25
DCAF11-227ENST00000560046 MTHFSDQ2M296 383 aaKnown RBP13.51□□□□□ -0.25
DCAF11-227ENST00000560046 IP6K1Q92551 441 aa13.51□□□□□ -0.25
DCAF11-227ENST00000560046 CHMP4BQ9H444 224 aaKnown RBP13.51□□□□□ -0.25
DCAF11-227ENST00000560046 C1orf167Q5SNV9 1468 aa13.5□□□□□ -0.25
DCAF11-227ENST00000560046 DCCP43146 1447 aa13.5□□□□□ -0.25
DCAF11-227ENST00000560046 PSDA5PKW4 1024 aaPredicted RBP13.5□□□□□ -0.25
DCAF11-227ENST00000560046 PAK3O75914 559 aaPredicted RBP13.5□□□□□ -0.25
DCAF11-227ENST00000560046 RGS3P49796 1198 aa13.5□□□□□ -0.25
DCAF11-227ENST00000560046 SF3B2Q13435 895 aaKnown RBP13.5□□□□□ -0.25
DCAF11-227ENST00000560046 ESCO1Q5FWF5 840 aa13.5□□□□□ -0.25
DCAF11-227ENST00000560046 NUTM2GQ5VZR2 741 aa13.5□□□□□ -0.25
DCAF11-227ENST00000560046 ITPRIPQ8IWB1 547 aa13.5□□□□□ -0.25
DCAF11-227ENST00000560046 FNBP4Q8N3X1 1017 aaPredicted RBP13.5□□□□□ -0.25
DCAF11-227ENST00000560046 KCNH5Q8NCM2 988 aa13.5□□□□□ -0.25
DCAF11-227ENST00000560046 API5Q9BZZ5 524 aaKnown RBP13.5□□□□□ -0.25
DCAF11-227ENST00000560046 PDZRN3Q9UPQ7 1066 aa13.5□□□□□ -0.25
DCAF11-227ENST00000560046 NCAPD2Q15021 1401 aa13.49□□□□□ -0.25
DCAF11-227ENST00000560046 PSME1Q06323 249 aa13.49□□□□□ -0.25
DCAF11-227ENST00000560046 MCM10Q7L590 875 aa13.49□□□□□ -0.25
DCAF11-227ENST00000560046 LMO7Q8WWI1 1683 aa13.49□□□□□ -0.25
DCAF11-227ENST00000560046 USP19O94966 1318 aa13.48□□□□□ -0.25
DCAF11-227ENST00000560046 SMC5Q8IY18 1101 aa13.48□□□□□ -0.25
DCAF11-227ENST00000560046 FAM208AQ9UK61 1670 aaKnown RBP13.47□□□□□ -0.25
DCAF11-227ENST00000560046 ORAI2Q96SN7 254 aa13.47□□□□□ -0.25
DCAF11-227ENST00000560046 BABAM1Q9NWV8 329 aa13.47□□□□□ -0.25
DCAF11-227ENST00000560046 NOP58Q9Y2X3 529 aaKnown RBP13.47□□□□□ -0.25
DCAF11-227ENST00000560046 N4BP2Q86UW6 1770 aaPredicted RBP13.47□□□□□ -0.25
DCAF11-227ENST00000560046 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.25
DCAF11-227ENST00000560046 ZBTB7BO15156 539 aaPredicted RBP13.46□□□□□ -0.25
DCAF11-227ENST00000560046 FOXO3O43524 673 aa13.46□□□□□ -0.25
DCAF11-227ENST00000560046 RTF1Q92541 710 aaKnown RBP13.46□□□□□ -0.25
DCAF11-227ENST00000560046 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
DCAF11-227ENST00000560046 KDM3BQ7LBC6 1761 aa13.45□□□□□ -0.26
DCAF11-227ENST00000560046 RGPD5Q99666 1765 aa13.45□□□□□ -0.26
DCAF11-227ENST00000560046 SOS1Q07889 1333 aaPredicted RBP13.45□□□□□ -0.26
DCAF11-227ENST00000560046 GNAT3A8MTJ3 354 aa13.45□□□□□ -0.26
DCAF11-227ENST00000560046 INTS3Q68E01 1043 aaKnown RBP13.44□□□□□ -0.26
DCAF11-227ENST00000560046 ERICH6Q7L0X2 663 aa13.44□□□□□ -0.26
DCAF11-227ENST00000560046 ARHGEF25Q86VW2 580 aa13.44□□□□□ -0.26
DCAF11-227ENST00000560046 CRYBG1Q9Y4K1 1723 aa13.44□□□□□ -0.26
DCAF11-227ENST00000560046 PTPRCP08575 1304 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms