RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 NLRP2Q9NX02 1062 aa13.04□□□□□ -0.32
SNRPA1-208ENST00000559686 WWC3Q9ULE0 1092 aa13.04□□□□□ -0.32
SNRPA1-208ENST00000559686 MSL1Q68DK7 614 aa13.03□□□□□ -0.32
SNRPA1-208ENST00000559686 KCNH5Q8NCM2 988 aa13.03□□□□□ -0.32
SNRPA1-208ENST00000559686 CENPJQ9HC77 1338 aaPredicted RBP13.03□□□□□ -0.32
SNRPA1-208ENST00000559686 RAB3GAP2Q9H2M9 1393 aa13.03□□□□□ -0.32
SNRPA1-208ENST00000559686 SYTL4Q96C24 671 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-208ENST00000559686 ZBTB12Q9Y330 459 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-208ENST00000559686 NFAT5O94916 1531 aa13.02□□□□□ -0.33
SNRPA1-208ENST00000559686 IL2RBP14784 551 aa13.01□□□□□ -0.33
SNRPA1-208ENST00000559686 DDX54Q8TDD1 881 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-208ENST00000559686 TTC21BQ7Z4L5 1316 aa13.01□□□□□ -0.33
SNRPA1-208ENST00000559686 KIAA1210Q9ULL0 1709 aa13.01□□□□□ -0.33
SNRPA1-208ENST00000559686 STAC3Q96MF2 364 aa13□□□□□ -0.33
SNRPA1-208ENST00000559686 LTN1O94822 1766 aa12.99□□□□□ -0.33
SNRPA1-208ENST00000559686 DOT1LQ8TEK3 1739 aa12.99□□□□□ -0.33
SNRPA1-208ENST00000559686 SLC27A3Q5K4L6 730 aa12.98□□□□□ -0.33
SNRPA1-208ENST00000559686 COL23A1Q86Y22 540 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-208ENST00000559686 ERBB3P21860 1342 aa12.96□□□□□ -0.33
SNRPA1-208ENST00000559686 PRIM1P49642 420 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-208ENST00000559686 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.96□□□□□ -0.33
SNRPA1-208ENST00000559686 ANKRD24Q8TF21 1146 aa12.96□□□□□ -0.33
SNRPA1-208ENST00000559686 LY75O60449 1722 aa12.96□□□□□ -0.34
SNRPA1-208ENST00000559686 ADCY9O60503 1353 aa12.95□□□□□ -0.34
SNRPA1-208ENST00000559686 LTV1Q96GA3 475 aaPredicted RBP12.95□□□□□ -0.34
SNRPA1-208ENST00000559686 CCNL1Q9UK58 526 aaPredicted RBP12.95□□□□□ -0.34
SNRPA1-208ENST00000559686 KTN1Q86UP2 1357 aaKnown RBP12.94□□□□□ -0.34
SNRPA1-208ENST00000559686 TTC21AQ8NDW8 1320 aa12.94□□□□□ -0.34
SNRPA1-208ENST00000559686 EVC2Q86UK5 1308 aa12.93□□□□□ -0.34
SNRPA1-208ENST00000559686 KIF3CO14782 793 aa12.93□□□□□ -0.34
SNRPA1-208ENST00000559686 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-208ENST00000559686 NME9Q86XW9 330 aa12.92□□□□□ -0.34
SNRPA1-208ENST00000559686 MON2Q7Z3U7 1717 aa12.91□□□□□ -0.34
SNRPA1-208ENST00000559686 ATXN8OSP0DMR3 200 aa12.91□□□□□ -0.34
SNRPA1-208ENST00000559686 APLP1P51693 650 aa12.91□□□□□ -0.34
SNRPA1-208ENST00000559686 CD2APQ9Y5K6 639 aa12.91□□□□□ -0.34
SNRPA1-208ENST00000559686 C5P01031 1676 aa12.91□□□□□ -0.34
SNRPA1-208ENST00000559686 NSD2O96028 1365 aa12.91□□□□□ -0.34
SNRPA1-208ENST00000559686 ANKRD36BQ8N2N9 1353 aa12.91□□□□□ -0.34
SNRPA1-208ENST00000559686 IGSF1Q8N6C5 1336 aa12.9□□□□□ -0.34
SNRPA1-208ENST00000559686 HTRA3P83110 453 aa12.9□□□□□ -0.34
SNRPA1-208ENST00000559686 COL13A1Q5TAT6 717 aaPredicted RBP12.9□□□□□ -0.34
SNRPA1-208ENST00000559686 RGPD2P0DJD1 1756 aa12.89□□□□□ -0.35
SNRPA1-208ENST00000559686 SMIM5Q71RC9 77 aa12.89□□□□□ -0.35
SNRPA1-208ENST00000559686 DNAJC5GQ8N7S2 189 aa12.89□□□□□ -0.35
SNRPA1-208ENST00000559686 USP47Q96K76 1375 aa12.89□□□□□ -0.35
SNRPA1-208ENST00000559686 WDR90Q96KV7 1748 aa12.88□□□□□ -0.35
SNRPA1-208ENST00000559686 PHF14O94880 888 aa12.87□□□□□ -0.35
SNRPA1-208ENST00000559686 USP54Q70EL1 1684 aa12.86□□□□□ -0.35
SNRPA1-208ENST00000559686 FAM208AQ9UK61 1670 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-208ENST00000559686 TNS4Q8IZW8 715 aa12.86□□□□□ -0.35
SNRPA1-208ENST00000559686 TAF1LQ8IZX4 1826 aa12.85□□□□□ -0.35
SNRPA1-208ENST00000559686 ZCRB1Q8TBF4 217 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-208ENST00000559686 USP31Q70CQ4 1352 aa12.84□□□□□ -0.35
SNRPA1-208ENST00000559686 TOMM70O94826 608 aa12.84□□□□□ -0.35
SNRPA1-208ENST00000559686 AMIGO3Q86WK7 504 aa12.84□□□□□ -0.35
SNRPA1-208ENST00000559686 TMC1Q8TDI8 760 aa12.84□□□□□ -0.35
SNRPA1-208ENST00000559686 NMRK2Q9NPI5 230 aa12.84□□□□□ -0.35
SNRPA1-208ENST00000559686 MEGF6O75095 1541 aa12.83□□□□□ -0.35
SNRPA1-208ENST00000559686 C4BP0C0L5 1744 aa12.83□□□□□ -0.36
SNRPA1-208ENST00000559686 TOGARAM1Q9Y4F4 1720 aa12.83□□□□□ -0.36
SNRPA1-208ENST00000559686 AK7Q96M32 723 aa12.83□□□□□ -0.36
SNRPA1-208ENST00000559686 PCNTO95613 3336 aa12.83□□□□□ -0.36
SNRPA1-208ENST00000559686 SBNO2Q9Y2G9 1366 aa12.82□□□□□ -0.36
SNRPA1-208ENST00000559686 N4BP2Q86UW6 1770 aaPredicted RBP12.82□□□□□ -0.36
SNRPA1-208ENST00000559686 USHBP1Q8N6Y0 703 aa12.82□□□□□ -0.36
SNRPA1-208ENST00000559686 IP6K1Q92551 441 aa12.82□□□□□ -0.36
SNRPA1-208ENST00000559686 FBLN1P23142 703 aa12.81□□□□□ -0.36
SNRPA1-208ENST00000559686 MPRIPQ6WCQ1 1025 aa12.81□□□□□ -0.36
SNRPA1-208ENST00000559686 C16orf71Q8IYS4 520 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-208ENST00000559686 FLAD1Q8NFF5 587 aa12.81□□□□□ -0.36
SNRPA1-208ENST00000559686 KLRG1Q96E93 195 aa12.81□□□□□ -0.36
SNRPA1-208ENST00000559686 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
SNRPA1-208ENST00000559686 UBR3Q6ZT12 1888 aa12.8□□□□□ -0.36
SNRPA1-208ENST00000559686 CD163L1Q9NR16 1453 aa12.8□□□□□ -0.36
SNRPA1-208ENST00000559686 PRELPP51888 382 aa12.8□□□□□ -0.36
SNRPA1-208ENST00000559686 ARHGAP27Q6ZUM4 889 aa12.8□□□□□ -0.36
SNRPA1-208ENST00000559686 HDGFL2Q7Z4V5 671 aaPredicted RBP12.8□□□□□ -0.36
SNRPA1-208ENST00000559686 BCS1LQ9Y276 419 aa12.8□□□□□ -0.36
SNRPA1-208ENST00000559686 CICQ96RK0 1608 aaPredicted RBP12.8□□□□□ -0.36
SNRPA1-208ENST00000559686 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-208ENST00000559686 AMPHP49418 695 aa12.79□□□□□ -0.36
SNRPA1-208ENST00000559686 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-208ENST00000559686 ROCK2O75116 1388 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-208ENST00000559686 SLC12A5Q9H2X9 1139 aa12.78□□□□□ -0.36
SNRPA1-208ENST00000559686 ITGB4P16144 1822 aa12.77□□□□□ -0.37
SNRPA1-208ENST00000559686 A0A0G2JLW4 131 aa12.77□□□□□ -0.37
SNRPA1-208ENST00000559686 HOXC9P31274 260 aa12.77□□□□□ -0.37
SNRPA1-208ENST00000559686 MAP3K19Q56UN5 1328 aa12.77□□□□□ -0.37
SNRPA1-208ENST00000559686 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.37
SNRPA1-208ENST00000559686 KIAA1551Q9HCM1 1747 aa12.76□□□□□ -0.37
SNRPA1-208ENST00000559686 JMYQ8N9B5 988 aa12.76□□□□□ -0.37
SNRPA1-208ENST00000559686 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
SNRPA1-208ENST00000559686 L3MBTL2Q969R5 705 aa12.76□□□□□ -0.37
SNRPA1-208ENST00000559686 PXDNLA1KZ92 1463 aa12.76□□□□□ -0.37
SNRPA1-208ENST00000559686 A0A1W2PP64 1363 aa12.75□□□□□ -0.37
SNRPA1-208ENST00000559686 FCHSD2O94868 740 aa12.75□□□□□ -0.37
SNRPA1-208ENST00000559686 NBPF6Q5VWK0 638 aa12.75□□□□□ -0.37
SNRPA1-208ENST00000559686 RBM46Q8TBY0 533 aaKnown RBP12.75□□□□□ -0.37
SNRPA1-208ENST00000559686 NBPF4Q96M43 638 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms