RNA–Protein interactions for RNA: ENST00000559432.5

CRNDE-206, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 3 BASIC

Gene CRNDE, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-206ENST00000559432 TATP17735 454 aaPredicted RBP34.69■■■■□ 3.14
CRNDE-206ENST00000559432 STK32BQ9NY57 414 aa34.69■■■■□ 3.14
CRNDE-206ENST00000559432 PANK3Q9H999 370 aa34.68■■■■□ 3.14
CRNDE-206ENST00000559432 SYTL4Q96C24 671 aaPredicted RBP34.66■■■■□ 3.14
CRNDE-206ENST00000559432 SPON1Q9HCB6 807 aa34.66■■■■□ 3.14
CRNDE-206ENST00000559432 BTAF1O14981 1849 aa34.65■■■■□ 3.14
CRNDE-206ENST00000559432 WASHC2AQ641Q2 1341 aa34.63■■■■□ 3.13
CRNDE-206ENST00000559432 TNNT2P45379 298 aaPredicted RBP34.62■■■■□ 3.13
CRNDE-206ENST00000559432 SLC15A2Q16348 729 aa34.62■■■■□ 3.13
CRNDE-206ENST00000559432 PRIM1P49642 420 aaKnown RBP34.61■■■■□ 3.13
CRNDE-206ENST00000559432 SHANK3Q9BYB0 1731 aa34.61■■■■□ 3.13
CRNDE-206ENST00000559432 ANKRD26Q9UPS8 1709 aa34.61■■■■□ 3.13
CRNDE-206ENST00000559432 POLKQ9UBT6 870 aa34.6■■■■□ 3.13
CRNDE-206ENST00000559432 PCDH11XQ9BZA7 1347 aa34.58■■■■□ 3.13
CRNDE-206ENST00000559432 PCDH11YQ9BZA8 1340 aa34.58■■■■□ 3.13
CRNDE-206ENST00000559432 KAT6BQ8WYB5 2073 aa34.58■■■■□ 3.13
CRNDE-206ENST00000559432 PPP1R1BQ9UD71 204 aaPredicted RBP34.58■■■■□ 3.13
CRNDE-206ENST00000559432 DOT1LQ8TEK3 1739 aa34.58■■■■□ 3.13
CRNDE-206ENST00000559432 NSD2O96028 1365 aa34.57■■■■□ 3.12
CRNDE-206ENST00000559432 MAP2P11137 1827 aaKnown RBP34.56■■■■□ 3.12
CRNDE-206ENST00000559432 SLC27A3Q5K4L6 730 aa34.54■■■■□ 3.12
CRNDE-206ENST00000559432 CASZ1Q86V15 1759 aa34.54■■■■□ 3.12
CRNDE-206ENST00000559432 PDGFDQ9GZP0 370 aaPredicted RBP34.52■■■■□ 3.12
CRNDE-206ENST00000559432 KNSTRNQ9Y448 316 aa34.52■■■■□ 3.12
CRNDE-206ENST00000559432 EYA1Q99502 592 aa34.51■■■■□ 3.12
CRNDE-206ENST00000559432 LRRC4BQ9NT99 713 aa34.51■■■■□ 3.12
CRNDE-206ENST00000559432 NCAPD2Q15021 1401 aa34.5■■■■□ 3.11
CRNDE-206ENST00000559432 ZBTB7AO95365 584 aa34.5■■■■□ 3.11
CRNDE-206ENST00000559432 MORC1Q86VD1 984 aa34.5■■■■□ 3.11
CRNDE-206ENST00000559432 PAPPAQ13219 1627 aa34.49■■■■□ 3.11
CRNDE-206ENST00000559432 SPG7Q9UQ90 795 aa34.48■■■■□ 3.11
CRNDE-206ENST00000559432 KIF7Q2M1P5 1343 aa34.48■■■■□ 3.11
CRNDE-206ENST00000559432 EIF4A2Q14240 407 aaKnown RBP34.47■■■■□ 3.11
CRNDE-206ENST00000559432 CYP27B1O15528 508 aa34.45■■■■□ 3.11
CRNDE-206ENST00000559432 ZNF827Q17R98 1081 aa34.44■■■■□ 3.1
CRNDE-206ENST00000559432 ATF5Q9Y2D1 282 aaPredicted RBP34.44■■■■□ 3.1
CRNDE-206ENST00000559432 PKD1L3Q7Z443 1732 aa34.44■■■■□ 3.1
CRNDE-206ENST00000559432 MTFR1LQ9H019 292 aa34.43■■■■□ 3.1
CRNDE-206ENST00000559432 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.41■■■■□ 3.1
CRNDE-206ENST00000559432 CCNL1Q9UK58 526 aaPredicted RBP34.41■■■■□ 3.1
CRNDE-206ENST00000559432 KCNQ4P56696 695 aa34.4■■■■□ 3.1
CRNDE-206ENST00000559432 MPRIPQ6WCQ1 1025 aa34.4■■■■□ 3.1
CRNDE-206ENST00000559432 AKT1S1Q96B36 256 aa34.4■■■■□ 3.1
CRNDE-206ENST00000559432 LY75O60449 1722 aa34.38■■■■□ 3.09
CRNDE-206ENST00000559432 PTGER2P43116 358 aa34.37■■■■□ 3.09
CRNDE-206ENST00000559432 NKX1-1Q15270 411 aaPredicted RBP34.36■■■■□ 3.09
CRNDE-206ENST00000559432 TFCP2L1Q9NZI6 479 aa34.36■■■■□ 3.09
CRNDE-206ENST00000559432 IGSF1Q8N6C5 1336 aa34.35■■■■□ 3.09
CRNDE-206ENST00000559432 AMER1Q5JTC6 1135 aaPredicted RBP34.34■■■■□ 3.09
CRNDE-206ENST00000559432 IFNL2Q8IZJ0 200 aa34.33■■■■□ 3.09
CRNDE-206ENST00000559432 PLEKHG2Q9H7P9 1386 aa34.33■■■■□ 3.09
CRNDE-206ENST00000559432 HMGB2P26583 209 aaKnown RBP34.32■■■■□ 3.08
CRNDE-206ENST00000559432 PALLDQ8WX93 1383 aa34.32■■■■□ 3.08
CRNDE-206ENST00000559432 TOGARAM1Q9Y4F4 1720 aa34.31■■■■□ 3.08
CRNDE-206ENST00000559432 DCAF8L1A6NGE4 600 aa34.31■■■■□ 3.08
CRNDE-206ENST00000559432 PHKG2P15735 406 aa34.31■■■■□ 3.08
CRNDE-206ENST00000559432 SMARCC1Q92922 1105 aaPredicted RBP34.31■■■■□ 3.08
CRNDE-206ENST00000559432 PNPLA7Q6ZV29 1317 aa34.3■■■■□ 3.08
CRNDE-206ENST00000559432 SLC16A10Q8TF71 515 aa34.29■■■■□ 3.08
CRNDE-206ENST00000559432 QSER1Q2KHR3 1735 aa34.27■■■■□ 3.08
CRNDE-206ENST00000559432 PIGBQ92521 554 aa34.27■■■■□ 3.08
CRNDE-206ENST00000559432 SGIP1Q9BQI5 828 aa34.27■■■■□ 3.08
CRNDE-206ENST00000559432 TMOD3Q9NYL9 352 aa34.27■■■■□ 3.08
CRNDE-206ENST00000559432 ITGB4P16144 1822 aa34.25■■■■□ 3.07
CRNDE-206ENST00000559432 PLEKHO1Q53GL0 409 aaPredicted RBP34.25■■■■□ 3.07
CRNDE-206ENST00000559432 PER1O15534 1290 aaPredicted RBP34.24■■■■□ 3.07
CRNDE-206ENST00000559432 ARXQ96QS3 562 aa34.23■■■■□ 3.07
CRNDE-206ENST00000559432 AMOTQ4VCS5 1084 aa34.22■■■■□ 3.07
CRNDE-206ENST00000559432 CC2D1BQ5T0F9 858 aaKnown RBP34.22■■■■□ 3.07
CRNDE-206ENST00000559432 MSH5O43196 834 aa34.21■■■■□ 3.07
CRNDE-206ENST00000559432 HSP90AB1P08238 724 aaKnown RBP34.21■■■■□ 3.07
CRNDE-206ENST00000559432 POLD1P28340 1107 aa34.21■■■■□ 3.07
CRNDE-206ENST00000559432 FHDC1Q9C0D6 1143 aaPredicted RBP34.21■■■■□ 3.07
CRNDE-206ENST00000559432 C5P01031 1676 aa34.2■■■■□ 3.07
CRNDE-206ENST00000559432 TUBGCP6Q96RT7 1819 aa34.19■■■■□ 3.06
CRNDE-206ENST00000559432 IL13P35225 146 aa34.19■■■■□ 3.06
CRNDE-206ENST00000559432 MTHFSP49914 203 aa34.19■■■■□ 3.06
CRNDE-206ENST00000559432 SULT6B1Q6IMI4 303 aa34.19■■■■□ 3.06
CRNDE-206ENST00000559432 AEBP1Q8IUX7 1158 aa34.19■■■■□ 3.06
CRNDE-206ENST00000559432 ZNF530Q6P9A1 599 aaPredicted RBP34.18■■■■□ 3.06
CRNDE-206ENST00000559432 DCAF5Q96JK2 942 aa34.17■■■■□ 3.06
CRNDE-206ENST00000559432 SYT17Q9BSW7 474 aa34.17■■■■□ 3.06
CRNDE-206ENST00000559432 COL23A1Q86Y22 540 aaPredicted RBP34.15■■■■□ 3.06
CRNDE-206ENST00000559432 ERVV-2B6SEH9 535 aa34.14■■■■□ 3.06
CRNDE-206ENST00000559432 C1orf141Q5JVX7 400 aa34.14■■■■□ 3.06
CRNDE-206ENST00000559432 FLAD1Q8NFF5 587 aa34.14■■■■□ 3.06
CRNDE-206ENST00000559432 AK7Q96M32 723 aa34.14■■■■□ 3.06
CRNDE-206ENST00000559432 ASAP1Q9ULH1 1129 aa34.14■■■■□ 3.06
CRNDE-206ENST00000559432 LOC102724428A0A0B4J2F2 783 aa34.13■■■■□ 3.05
CRNDE-206ENST00000559432 SIK1P57059 783 aa34.13■■■■□ 3.05
CRNDE-206ENST00000559432 KDRP35968 1356 aa34.12■■■■□ 3.05
CRNDE-206ENST00000559432 NPC1L1Q9UHC9 1359 aa34.12■■■■□ 3.05
CRNDE-206ENST00000559432 CNGB1Q14028 1251 aaPredicted RBP34.12■■■■□ 3.05
CRNDE-206ENST00000559432 TAF1LQ8IZX4 1826 aa34.11■■■■□ 3.05
CRNDE-206ENST00000559432 ATG3Q9NT62 314 aa34.1■■■■□ 3.05
CRNDE-206ENST00000559432 C4BP0C0L5 1744 aa34.1■■■■□ 3.05
CRNDE-206ENST00000559432 MAP3K5Q99683 1374 aa34.09■■■■□ 3.05
CRNDE-206ENST00000559432 CABP4P57796 275 aa34.08■■■■□ 3.05
CRNDE-206ENST00000559432 KLHL34Q8N239 644 aa34.08■■■■□ 3.05
CRNDE-206ENST00000559432 DIAPH1O60610 1272 aaKnown RBP34.07■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms