RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 PROM2Q8N271 834 aa17.35■□□□□ 0.37
RABGGTA-207ENST00000558936 COL3A1P02461 1466 aaPredicted RBP17.35■□□□□ 0.37
RABGGTA-207ENST00000558936 NUP188Q5SRE5 1749 aa17.35■□□□□ 0.37
RABGGTA-207ENST00000558936 BTAF1O14981 1849 aa17.33■□□□□ 0.36
RABGGTA-207ENST00000558936 DOT1LQ8TEK3 1739 aa17.33■□□□□ 0.36
RABGGTA-207ENST00000558936 IGSF1Q8N6C5 1336 aa17.32■□□□□ 0.36
RABGGTA-207ENST00000558936 IL13P35225 146 aa17.32■□□□□ 0.36
RABGGTA-207ENST00000558936 SF3B2Q13435 895 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-207ENST00000558936 AEBP1Q8IUX7 1158 aa17.32■□□□□ 0.36
RABGGTA-207ENST00000558936 CYP27B1O15528 508 aa17.31■□□□□ 0.36
RABGGTA-207ENST00000558936 MTHFSP49914 203 aa17.31■□□□□ 0.36
RABGGTA-207ENST00000558936 CNGB1Q14028 1251 aaPredicted RBP17.31■□□□□ 0.36
RABGGTA-207ENST00000558936 ACSBG1Q96GR2 724 aa17.31■□□□□ 0.36
RABGGTA-207ENST00000558936 APBA3O96018 575 aa17.3■□□□□ 0.36
RABGGTA-207ENST00000558936 KAT6BQ8WYB5 2073 aa17.3■□□□□ 0.36
RABGGTA-207ENST00000558936 RGPD3A6NKT7 1758 aaPredicted RBP17.3■□□□□ 0.36
RABGGTA-207ENST00000558936 RGPD4Q7Z3J3 1758 aa17.3■□□□□ 0.36
RABGGTA-207ENST00000558936 ZCRB1Q8TBF4 217 aaKnown RBP17.29■□□□□ 0.36
RABGGTA-207ENST00000558936 DDX54Q8TDD1 881 aaKnown RBP17.29■□□□□ 0.36
RABGGTA-207ENST00000558936 BCL11BQ9C0K0 894 aaPredicted RBP17.29■□□□□ 0.36
RABGGTA-207ENST00000558936 ITGB4P16144 1822 aa17.28■□□□□ 0.36
RABGGTA-207ENST00000558936 BAG6P46379 1132 aa17.27■□□□□ 0.36
RABGGTA-207ENST00000558936 KDRP35968 1356 aa17.26■□□□□ 0.35
RABGGTA-207ENST00000558936 PLSCR1O15162 318 aa17.25■□□□□ 0.35
RABGGTA-207ENST00000558936 PAPPAQ13219 1627 aa17.24■□□□□ 0.35
RABGGTA-207ENST00000558936 LY75O60449 1722 aa17.24■□□□□ 0.35
RABGGTA-207ENST00000558936 TATP17735 454 aaPredicted RBP17.23■□□□□ 0.35
RABGGTA-207ENST00000558936 PPP2R1AP30153 589 aa17.23■□□□□ 0.35
RABGGTA-207ENST00000558936 PRIM1P49642 420 aaKnown RBP17.23■□□□□ 0.35
RABGGTA-207ENST00000558936 ANO8Q9HCE9 1232 aaPredicted RBP17.23■□□□□ 0.35
RABGGTA-207ENST00000558936 DDX10Q13206 875 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-207ENST00000558936 NKX1-1Q15270 411 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-207ENST00000558936 RAPGEF4Q8WZA2 1011 aa17.22■□□□□ 0.35
RABGGTA-207ENST00000558936 LRRC4BQ9NT99 713 aa17.22■□□□□ 0.35
RABGGTA-207ENST00000558936 PARD3Q8TEW0 1356 aa17.22■□□□□ 0.35
RABGGTA-207ENST00000558936 PSDA5PKW4 1024 aaPredicted RBP17.21■□□□□ 0.35
RABGGTA-207ENST00000558936 VIRMAQ69YN4 1812 aaKnown RBP17.2■□□□□ 0.34
RABGGTA-207ENST00000558936 SULT6B1Q6IMI4 303 aa17.2■□□□□ 0.34
RABGGTA-207ENST00000558936 PDGFDQ9GZP0 370 aaPredicted RBP17.2■□□□□ 0.34
RABGGTA-207ENST00000558936 PHKG2P15735 406 aa17.19■□□□□ 0.34
RABGGTA-207ENST00000558936 KCNQ4P56696 695 aa17.19■□□□□ 0.34
RABGGTA-207ENST00000558936 KDM6AO15550 1401 aaPredicted RBP17.19■□□□□ 0.34
RABGGTA-207ENST00000558936 HMOX1P09601 288 aa17.18■□□□□ 0.34
RABGGTA-207ENST00000558936 TXNRD1Q16881 649 aa17.18■□□□□ 0.34
RABGGTA-207ENST00000558936 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.18■□□□□ 0.342e-8■□□□□ 10.7
RABGGTA-207ENST00000558936 PCDH11XQ9BZA7 1347 aa17.18■□□□□ 0.34
RABGGTA-207ENST00000558936 PCDH11YQ9BZA8 1340 aa17.18■□□□□ 0.34
RABGGTA-207ENST00000558936 TUBGCP6Q96RT7 1819 aa17.17■□□□□ 0.34
RABGGTA-207ENST00000558936 R3HDM1Q15032 1099 aaKnown RBP17.17■□□□□ 0.34
RABGGTA-207ENST00000558936 CASZ1Q86V15 1759 aa17.17■□□□□ 0.34
RABGGTA-207ENST00000558936 ADAMTS7Q9UKP4 1686 aa17.16■□□□□ 0.34
RABGGTA-207ENST00000558936 SCN11AQ9UI33 1791 aa17.15■□□□□ 0.34
RABGGTA-207ENST00000558936 TAF1LQ8IZX4 1826 aa17.15■□□□□ 0.34
RABGGTA-207ENST00000558936 DIAPH1O60610 1272 aaKnown RBP17.15■□□□□ 0.34
RABGGTA-207ENST00000558936 PIGBQ92521 554 aa17.14■□□□□ 0.33
RABGGTA-207ENST00000558936 ZNF827Q17R98 1081 aa17.13■□□□□ 0.33
RABGGTA-207ENST00000558936 PLEKHG2Q9H7P9 1386 aa17.13■□□□□ 0.33
RABGGTA-207ENST00000558936 ZEB1P37275 1124 aaPredicted RBP17.12■□□□□ 0.33
RABGGTA-207ENST00000558936 MTHFSDQ2M296 383 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-207ENST00000558936 SYTL4Q96C24 671 aaPredicted RBP17.12■□□□□ 0.33
RABGGTA-207ENST00000558936 PHACTR3Q96KR7 559 aa17.12■□□□□ 0.33
RABGGTA-207ENST00000558936 SPG7Q9UQ90 795 aa17.12■□□□□ 0.33
RABGGTA-207ENST00000558936 AMIGO3Q86WK7 504 aa17.11■□□□□ 0.33
RABGGTA-207ENST00000558936 IFNL2Q8IZJ0 200 aa17.11■□□□□ 0.33
RABGGTA-207ENST00000558936 SLC4A9Q96Q91 983 aa17.11■□□□□ 0.33
RABGGTA-207ENST00000558936 RSPH6AQ9H0K4 717 aa17.11■□□□□ 0.33
RABGGTA-207ENST00000558936 LGR6Q9HBX8 967 aa17.11■□□□□ 0.33
RABGGTA-207ENST00000558936 MPRIPQ6WCQ1 1025 aa17.1■□□□□ 0.33
RABGGTA-207ENST00000558936 AKT1S1Q96B36 256 aa17.09■□□□□ 0.33
RABGGTA-207ENST00000558936 ASAP1Q9ULH1 1129 aa17.09■□□□□ 0.33
RABGGTA-207ENST00000558936 PLEKHO1Q53GL0 409 aaPredicted RBP17.08■□□□□ 0.32
RABGGTA-207ENST00000558936 ZNF530Q6P9A1 599 aaPredicted RBP17.08■□□□□ 0.32
RABGGTA-207ENST00000558936 ATG3Q9NT62 314 aa17.08■□□□□ 0.32
RABGGTA-207ENST00000558936 C5P01031 1676 aa17.07■□□□□ 0.32
RABGGTA-207ENST00000558936 LRP5O75197 1615 aa17.07■□□□□ 0.32
RABGGTA-207ENST00000558936 SIPA1L3O60292 1781 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-207ENST00000558936 QSER1Q2KHR3 1735 aa17.07■□□□□ 0.32
RABGGTA-207ENST00000558936 U2SURPO15042 1029 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-207ENST00000558936 SLC15A2Q16348 729 aa17.06■□□□□ 0.32
RABGGTA-207ENST00000558936 AMOTQ4VCS5 1084 aa17.06■□□□□ 0.32
RABGGTA-207ENST00000558936 SMIM5Q71RC9 77 aa17.06■□□□□ 0.32
RABGGTA-207ENST00000558936 PALLDQ8WX93 1383 aa17.05■□□□□ 0.32
RABGGTA-207ENST00000558936 NBPF14Q5TI25 921 aa17.05■□□□□ 0.32
RABGGTA-207ENST00000558936 MYH14Q7Z406 1995 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-207ENST00000558936 DLG5Q8TDM6 1919 aa17.05■□□□□ 0.32
RABGGTA-207ENST00000558936 MRC1P22897 1456 aa17.05■□□□□ 0.32
RABGGTA-207ENST00000558936 COL24A1Q17RW2 1714 aa17.04■□□□□ 0.32
RABGGTA-207ENST00000558936 ITPK1Q13572 414 aa17.04■□□□□ 0.32
RABGGTA-207ENST00000558936 CCDC184Q52MB2 194 aa17.04■□□□□ 0.32
RABGGTA-207ENST00000558936 IL17REQ8NFR9 667 aa17.04■□□□□ 0.32
RABGGTA-207ENST00000558936 DCAF5Q96JK2 942 aa17.04■□□□□ 0.32
RABGGTA-207ENST00000558936 PLEKHF1Q96S99 279 aa17.04■□□□□ 0.32
RABGGTA-207ENST00000558936 PRKAR2BP31323 418 aa17.03■□□□□ 0.32
RABGGTA-207ENST00000558936 PRKRIP1Q9H875 184 aaPredicted RBP17.03■□□□□ 0.32
RABGGTA-207ENST00000558936 COL5A3P25940 1745 aaPredicted RBP17.03■□□□□ 0.32
RABGGTA-207ENST00000558936 UBR3Q6ZT12 1888 aa17.03■□□□□ 0.32
RABGGTA-207ENST00000558936 C4BP0C0L5 1744 aa17.02■□□□□ 0.32
RABGGTA-207ENST00000558936 TJP1Q07157 1748 aa17.02■□□□□ 0.32
RABGGTA-207ENST00000558936 ZNF316A6NFI3 1004 aaPredicted RBP17.02■□□□□ 0.32
RABGGTA-207ENST00000558936 ERVV-2B6SEH9 535 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms