RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 RGPD4Q7Z3J3 1758 aa20.97■□□□□ 0.95
RPL28-207ENST00000558815 NSD2O96028 1365 aa20.97■□□□□ 0.95
RPL28-207ENST00000558815 MORC1Q86VD1 984 aa20.96■□□□□ 0.95
RPL28-207ENST00000558815 TATP17735 454 aaPredicted RBP20.95■□□□□ 0.94
RPL28-207ENST00000558815 ZCRB1Q8TBF4 217 aaKnown RBP20.95■□□□□ 0.94
RPL28-207ENST00000558815 DOT1LQ8TEK3 1739 aa20.94■□□□□ 0.94
RPL28-207ENST00000558815 WASHC2AQ641Q2 1341 aa20.94■□□□□ 0.94
RPL28-207ENST00000558815 BTAF1O14981 1849 aa20.94■□□□□ 0.94
RPL28-207ENST00000558815 PLSCR1O15162 318 aa20.93■□□□□ 0.94
RPL28-207ENST00000558815 NBPF14Q5TI25 921 aa20.92■□□□□ 0.94
RPL28-207ENST00000558815 CNGB1Q14028 1251 aaPredicted RBP20.91■□□□□ 0.94
RPL28-207ENST00000558815 SYTL4Q96C24 671 aaPredicted RBP20.91■□□□□ 0.94
RPL28-207ENST00000558815 EIF4A2Q14240 407 aaKnown RBP20.89■□□□□ 0.93
RPL28-207ENST00000558815 EYA1Q99502 592 aa20.89■□□□□ 0.93
RPL28-207ENST00000558815 TXNRD1Q16881 649 aa20.88■□□□□ 0.93
RPL28-207ENST00000558815 AMER1Q5JTC6 1135 aaPredicted RBP20.88■□□□□ 0.93
RPL28-207ENST00000558815 CC2D1BQ5T0F9 858 aaKnown RBP20.87■□□□□ 0.93
RPL28-207ENST00000558815 PKD1L3Q7Z443 1732 aa20.87■□□□□ 0.93
RPL28-207ENST00000558815 PCDH11XQ9BZA7 1347 aa20.86■□□□□ 0.93
RPL28-207ENST00000558815 PCDH11YQ9BZA8 1340 aa20.86■□□□□ 0.93
RPL28-207ENST00000558815 PRIM1P49642 420 aaKnown RBP20.86■□□□□ 0.93
RPL28-207ENST00000558815 PROM2Q8N271 834 aa20.86■□□□□ 0.93
RPL28-207ENST00000558815 NCAPD2Q15021 1401 aa20.86■□□□□ 0.93
RPL28-207ENST00000558815 ANO8Q9HCE9 1232 aaPredicted RBP20.85■□□□□ 0.93
RPL28-207ENST00000558815 LRP5O75197 1615 aa20.85■□□□□ 0.93
RPL28-207ENST00000558815 PER1O15534 1290 aaPredicted RBP20.83■□□□□ 0.93
RPL28-207ENST00000558815 CYP27B1O15528 508 aa20.81■□□□□ 0.92
RPL28-207ENST00000558815 SPG7Q9UQ90 795 aa20.81■□□□□ 0.92
RPL28-207ENST00000558815 STK32BQ9NY57 414 aa20.8■□□□□ 0.92
RPL28-207ENST00000558815 TOGARAM1Q9Y4F4 1720 aa20.8■□□□□ 0.92
RPL28-207ENST00000558815 SRCAPQ6ZRS2 3230 aa20.8■□□□□ 0.92
RPL28-207ENST00000558815 IGSF1Q8N6C5 1336 aa20.79■□□□□ 0.92
RPL28-207ENST00000558815 ITGB4P16144 1822 aa20.78■□□□□ 0.92
RPL28-207ENST00000558815 MTHFSP49914 203 aa20.77■□□□□ 0.92
RPL28-207ENST00000558815 LY75O60449 1722 aa20.77■□□□□ 0.92
RPL28-207ENST00000558815 PAPPAQ13219 1627 aa20.76■□□□□ 0.91
RPL28-207ENST00000558815 KCNQ4P56696 695 aa20.76■□□□□ 0.91
RPL28-207ENST00000558815 MPRIPQ6WCQ1 1025 aa20.76■□□□□ 0.91
RPL28-207ENST00000558815 CASZ1Q86V15 1759 aa20.75■□□□□ 0.91
RPL28-207ENST00000558815 SLC15A2Q16348 729 aa20.75■□□□□ 0.91
RPL28-207ENST00000558815 AEBP1Q8IUX7 1158 aa20.75■□□□□ 0.91
RPL28-207ENST00000558815 LRRC4BQ9NT99 713 aa20.75■□□□□ 0.91
RPL28-207ENST00000558815 SULT6B1Q6IMI4 303 aa20.74■□□□□ 0.91
RPL28-207ENST00000558815 PDGFDQ9GZP0 370 aaPredicted RBP20.74■□□□□ 0.91
RPL28-207ENST00000558815 IL13P35225 146 aa20.73■□□□□ 0.91
RPL28-207ENST00000558815 IFNL2Q8IZJ0 200 aa20.73■□□□□ 0.91
RPL28-207ENST00000558815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.73■□□□□ 0.91
RPL28-207ENST00000558815 NPC1L1Q9UHC9 1359 aa20.72■□□□□ 0.91
RPL28-207ENST00000558815 PHKG2P15735 406 aa20.72■□□□□ 0.91
RPL28-207ENST00000558815 ZNF827Q17R98 1081 aa20.71■□□□□ 0.91
RPL28-207ENST00000558815 PLEKHO1Q53GL0 409 aaPredicted RBP20.71■□□□□ 0.91
RPL28-207ENST00000558815 SLC27A3Q5K4L6 730 aa20.71■□□□□ 0.91
RPL28-207ENST00000558815 CCNL1Q9UK58 526 aaPredicted RBP20.71■□□□□ 0.91
RPL28-207ENST00000558815 ZBTB7AO95365 584 aa20.7■□□□□ 0.9
RPL28-207ENST00000558815 NKX1-1Q15270 411 aaPredicted RBP20.7■□□□□ 0.9
RPL28-207ENST00000558815 SPON1Q9HCB6 807 aa20.7■□□□□ 0.9
RPL28-207ENST00000558815 ZNF530Q6P9A1 599 aaPredicted RBP20.69■□□□□ 0.9
RPL28-207ENST00000558815 PALLDQ8WX93 1383 aa20.69■□□□□ 0.9
RPL28-207ENST00000558815 DIAPH1O60610 1272 aaKnown RBP20.68■□□□□ 0.9
RPL28-207ENST00000558815 HMOX1P09601 288 aa20.68■□□□□ 0.9
RPL28-207ENST00000558815 TMOD3Q9NYL9 352 aa20.68■□□□□ 0.9
RPL28-207ENST00000558815 PPP1R1BQ9UD71 204 aaPredicted RBP20.68■□□□□ 0.9
RPL28-207ENST00000558815 TUBGCP6Q96RT7 1819 aa20.68■□□□□ 0.9
RPL28-207ENST00000558815 PIGBQ92521 554 aa20.67■□□□□ 0.9
RPL28-207ENST00000558815 ATF5Q9Y2D1 282 aaPredicted RBP20.67■□□□□ 0.9
RPL28-207ENST00000558815 C5P01031 1676 aa20.67■□□□□ 0.9
RPL28-207ENST00000558815 AMOTQ4VCS5 1084 aa20.66■□□□□ 0.9
RPL28-207ENST00000558815 PLEKHG2Q9H7P9 1386 aa20.66■□□□□ 0.9
RPL28-207ENST00000558815 KDRP35968 1356 aa20.65■□□□□ 0.9
RPL28-207ENST00000558815 C1orf141Q5JVX7 400 aa20.65■□□□□ 0.9
RPL28-207ENST00000558815 AKT1S1Q96B36 256 aa20.65■□□□□ 0.9
RPL28-207ENST00000558815 QSER1Q2KHR3 1735 aa20.64■□□□□ 0.9
RPL28-207ENST00000558815 U2SURPO15042 1029 aaKnown RBP20.64■□□□□ 0.89
RPL28-207ENST00000558815 SMARCC1Q92922 1105 aaPredicted RBP20.64■□□□□ 0.89
RPL28-207ENST00000558815 TFCP2L1Q9NZI6 479 aa20.64■□□□□ 0.89
RPL28-207ENST00000558815 TAF1LQ8IZX4 1826 aa20.64■□□□□ 0.89
RPL28-207ENST00000558815 COL3A1P02461 1466 aaPredicted RBP20.63■□□□□ 0.89
RPL28-207ENST00000558815 HSP90AB1P08238 724 aaKnown RBP20.63■□□□□ 0.89
RPL28-207ENST00000558815 DCAF5Q96JK2 942 aa20.62■□□□□ 0.89
RPL28-207ENST00000558815 KDM6AO15550 1401 aaPredicted RBP20.61■□□□□ 0.89
RPL28-207ENST00000558815 CFAP53Q96M91 514 aa20.61■□□□□ 0.89
RPL28-207ENST00000558815 ASAP1Q9ULH1 1129 aa20.61■□□□□ 0.89
RPL28-207ENST00000558815 PNPLA7Q6ZV29 1317 aa20.6■□□□□ 0.89
RPL28-207ENST00000558815 MTFR1LQ9H019 292 aa20.6■□□□□ 0.89
RPL28-207ENST00000558815 VIRMAQ69YN4 1812 aaKnown RBP20.6■□□□□ 0.89
RPL28-207ENST00000558815 MSH5O43196 834 aa20.59■□□□□ 0.89
RPL28-207ENST00000558815 PPP2R1AP30153 589 aa20.59■□□□□ 0.89
RPL28-207ENST00000558815 CABP4P57796 275 aa20.59■□□□□ 0.89
RPL28-207ENST00000558815 SCN11AQ9UI33 1791 aa20.59■□□□□ 0.89
RPL28-207ENST00000558815 C4BP0C0L5 1744 aa20.58■□□□□ 0.89
RPL28-207ENST00000558815 ERVV-2B6SEH9 535 aa20.58■□□□□ 0.89
RPL28-207ENST00000558815 LOC102724428A0A0B4J2F2 783 aa20.57■□□□□ 0.88
RPL28-207ENST00000558815 PTGER2P43116 358 aa20.57■□□□□ 0.88
RPL28-207ENST00000558815 SIK1P57059 783 aa20.57■□□□□ 0.88
RPL28-207ENST00000558815 ATG3Q9NT62 314 aa20.57■□□□□ 0.88
RPL28-207ENST00000558815 ATP6V1AP38606 617 aa20.55■□□□□ 0.88
RPL28-207ENST00000558815 MTHFSDQ2M296 383 aaKnown RBP20.55■□□□□ 0.88
RPL28-207ENST00000558815 AKAP4Q5JQC9 854 aa20.55■□□□□ 0.88
RPL28-207ENST00000558815 AK7Q96M32 723 aa20.55■□□□□ 0.88
RPL28-207ENST00000558815 RBM42Q9BTD8 480 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms