RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 LILRB3O75022 631 aa9.92□□□□□ -0.82
ZEB1-211ENST00000558440 UBTFP17480 764 aaKnown RBP9.92□□□□□ -0.82
ZEB1-211ENST00000558440 CLK2P49760 499 aaKnown RBP9.92□□□□□ -0.82
ZEB1-211ENST00000558440 CTC1Q2NKJ3 1217 aa9.92□□□□□ -0.82
ZEB1-211ENST00000558440 AFAP1Q8N556 730 aa9.92□□□□□ -0.82
ZEB1-211ENST00000558440 GPBP1L1Q9HC44 474 aaPredicted RBP9.92□□□□□ -0.82
ZEB1-211ENST00000558440 SUPT6HQ7KZ85 1726 aaKnown RBP9.91□□□□□ -0.82
ZEB1-211ENST00000558440 J3QL48 77 aa9.91□□□□□ -0.82
ZEB1-211ENST00000558440 SMCPP49901 116 aaPredicted RBP9.91□□□□□ -0.82
ZEB1-211ENST00000558440 SH3BP2P78314 561 aa9.91□□□□□ -0.82
ZEB1-211ENST00000558440 KDM4CQ9H3R0 1056 aa9.91□□□□□ -0.82
ZEB1-211ENST00000558440 ARHGAP35Q9NRY4 1499 aa9.91□□□□□ -0.82
ZEB1-211ENST00000558440 PTPRTO14522 1441 aa9.9□□□□□ -0.82
ZEB1-211ENST00000558440 NUTM2BA6NNL0 878 aaPredicted RBP9.9□□□□□ -0.82
ZEB1-211ENST00000558440 NUTM2EB1AL46 878 aaPredicted RBP9.9□□□□□ -0.82
ZEB1-211ENST00000558440 SOCS7O14512 581 aa9.9□□□□□ -0.82
ZEB1-211ENST00000558440 F12P00748 615 aaPredicted RBP9.9□□□□□ -0.82
ZEB1-211ENST00000558440 NUTM2DQ5VT03 806 aaPredicted RBP9.9□□□□□ -0.82
ZEB1-211ENST00000558440 ILDR2Q71H61 639 aa9.9□□□□□ -0.82
ZEB1-211ENST00000558440 NUTM2AQ8IVF1 878 aaPredicted RBP9.9□□□□□ -0.82
ZEB1-211ENST00000558440 EHBP1Q8NDI1 1231 aa9.9□□□□□ -0.82
ZEB1-211ENST00000558440 AGLP35573 1532 aa9.9□□□□□ -0.82
ZEB1-211ENST00000558440 KIDINS220Q9ULH0 1771 aa9.9□□□□□ -0.82
ZEB1-211ENST00000558440 MLH3Q9UHC1 1453 aa9.9□□□□□ -0.83
ZEB1-211ENST00000558440 CDC42BPAQ5VT25 1732 aa9.9□□□□□ -0.83
ZEB1-211ENST00000558440 ABCC1P33527 1531 aa9.89□□□□□ -0.83
ZEB1-211ENST00000558440 AXIN1O15169 862 aa9.89□□□□□ -0.83
ZEB1-211ENST00000558440 SIAH2O43255 324 aa9.89□□□□□ -0.83
ZEB1-211ENST00000558440 LINC01559Q495D7 138 aa9.89□□□□□ -0.83
ZEB1-211ENST00000558440 LCE2AQ5TA79 106 aaPredicted RBP9.89□□□□□ -0.83
ZEB1-211ENST00000558440 BAP1Q92560 729 aa9.89□□□□□ -0.83
ZEB1-211ENST00000558440 MROH2AA6NES4 1674 aa9.89□□□□□ -0.83
ZEB1-211ENST00000558440 IQSEC2Q5JU85 1478 aa9.88□□□□□ -0.83
ZEB1-211ENST00000558440 CTHP32929 405 aa9.88□□□□□ -0.83
ZEB1-211ENST00000558440 ZNF511Q8NB15 262 aa9.88□□□□□ -0.83
ZEB1-211ENST00000558440 POLR3EQ9NVU0 708 aa9.88□□□□□ -0.83
ZEB1-211ENST00000558440 CNTLNQ9NXG0 1405 aa9.88□□□□□ -0.83
ZEB1-211ENST00000558440 TRAPPC8Q9Y2L5 1435 aa9.88□□□□□ -0.83
ZEB1-211ENST00000558440 LTBP4Q8N2S1 1624 aa9.87□□□□□ -0.83
ZEB1-211ENST00000558440 DDRGK1Q96HY6 314 aa9.87□□□□□ -0.83
ZEB1-211ENST00000558440 MAP10Q9P2G4 905 aa9.87□□□□□ -0.83
ZEB1-211ENST00000558440 CCDC18Q5T9S5 1454 aa9.86□□□□□ -0.83
ZEB1-211ENST00000558440 PER1O15534 1290 aaPredicted RBP9.86□□□□□ -0.83
ZEB1-211ENST00000558440 ALDH1A1P00352 501 aa9.86□□□□□ -0.83
ZEB1-211ENST00000558440 NCOA1Q15788 1441 aa9.86□□□□□ -0.83
ZEB1-211ENST00000558440 RTL5Q5HYW3 569 aaPredicted RBP9.86□□□□□ -0.83
ZEB1-211ENST00000558440 TSC1Q92574 1164 aa9.86□□□□□ -0.83
ZEB1-211ENST00000558440 FAM117AQ9C073 453 aa9.86□□□□□ -0.83
ZEB1-211ENST00000558440 DACH1Q9UI36 760 aa9.86□□□□□ -0.83
ZEB1-211ENST00000558440 CAMSAP1Q5T5Y3 1602 aa9.85□□□□□ -0.83
ZEB1-211ENST00000558440 SH3D19Q5HYK7 790 aa9.85□□□□□ -0.83
ZEB1-211ENST00000558440 HELBQ8NG08 1087 aaPredicted RBP9.85□□□□□ -0.83
ZEB1-211ENST00000558440 HPS1Q92902 700 aa9.85□□□□□ -0.83
ZEB1-211ENST00000558440 CLTCQ00610 1675 aaKnown RBP9.85□□□□□ -0.83
ZEB1-211ENST00000558440 ZNF142P52746 1687 aaPredicted RBP9.84□□□□□ -0.83
ZEB1-211ENST00000558440 SKIV2LQ15477 1246 aaKnown RBP9.84□□□□□ -0.83
ZEB1-211ENST00000558440 SAMD9LQ8IVG5 1584 aa9.84□□□□□ -0.83
ZEB1-211ENST00000558440 NPATQ14207 1427 aa9.83□□□□□ -0.84
ZEB1-211ENST00000558440 MYO3AQ8NEV4 1616 aa9.83□□□□□ -0.84
ZEB1-211ENST00000558440 PLEKHG3A1L390 1219 aa9.83□□□□□ -0.84
ZEB1-211ENST00000558440 WFS1O76024 890 aa9.83□□□□□ -0.84
ZEB1-211ENST00000558440 VARSP26640 1264 aaKnown RBP9.83□□□□□ -0.84
ZEB1-211ENST00000558440 CASKIN1Q8WXD9 1431 aa9.82□□□□□ -0.84
ZEB1-211ENST00000558440 SYCP2Q9BX26 1530 aa9.82□□□□□ -0.84
ZEB1-211ENST00000558440 ZNF777Q9ULD5 760 aaPredicted RBP9.81□□□□□ -0.84
ZEB1-211ENST00000558440 ZMYM3Q14202 1370 aa9.8□□□□□ -0.84
ZEB1-211ENST00000558440 MPNDQ8N594 471 aa9.8□□□□□ -0.84
ZEB1-211ENST00000558440 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.8□□□□□ -0.84
ZEB1-211ENST00000558440 GMPR2Q9P2T1 348 aaKnown RBP9.8□□□□□ -0.84
ZEB1-211ENST00000558440 TLL2Q9Y6L7 1015 aa9.8□□□□□ -0.84
ZEB1-211ENST00000558440 WASF2Q9Y6W5 498 aa9.8□□□□□ -0.84
ZEB1-211ENST00000558440 ATP7AQ04656 1500 aa9.8□□□□□ -0.84
ZEB1-211ENST00000558440 ADGBQ8N7X0 1667 aa9.8□□□□□ -0.84
ZEB1-211ENST00000558440 SPAG9O60271 1321 aaKnown RBP9.8□□□□□ -0.84
ZEB1-211ENST00000558440 INO80Q9ULG1 1556 aaPredicted RBP9.8□□□□□ -0.84
ZEB1-211ENST00000558440 CEP170BQ9Y4F5 1589 aaPredicted RBP9.8□□□□□ -0.84
ZEB1-211ENST00000558440 FYCO1Q9BQS8 1478 aa9.79□□□□□ -0.84
ZEB1-211ENST00000558440 C11orf95C9JLR9 678 aaPredicted RBP9.79□□□□□ -0.84
ZEB1-211ENST00000558440 UBAP1LF5GYI3 381 aa9.79□□□□□ -0.84
ZEB1-211ENST00000558440 PROCA1Q8NCQ7 364 aaPredicted RBP9.79□□□□□ -0.84
ZEB1-211ENST00000558440 FOXJ1Q92949 421 aa9.79□□□□□ -0.84
ZEB1-211ENST00000558440 ATP13A2Q9NQ11 1180 aa9.79□□□□□ -0.84
ZEB1-211ENST00000558440 PLXNC1O60486 1568 aa9.79□□□□□ -0.84
ZEB1-211ENST00000558440 POLR1AO95602 1720 aaPredicted RBP9.79□□□□□ -0.84
ZEB1-211ENST00000558440 PLA2R1Q13018 1463 aa9.79□□□□□ -0.84
ZEB1-211ENST00000558440 FBXO31Q5XUX0 539 aaPredicted RBP9.78□□□□□ -0.84
ZEB1-211ENST00000558440 ARMC2Q8NEN0 867 aa9.78□□□□□ -0.84
ZEB1-211ENST00000558440 STK17AQ9UEE5 414 aa9.78□□□□□ -0.84
ZEB1-211ENST00000558440 ZNF335Q9H4Z2 1342 aaPredicted RBP9.78□□□□□ -0.84
ZEB1-211ENST00000558440 PLEKHH2Q8IVE3 1493 aa9.78□□□□□ -0.84
ZEB1-211ENST00000558440 CTDSPL2Q05D32 466 aa9.77□□□□□ -0.85
ZEB1-211ENST00000558440 PPP2R2DQ66LE6 453 aa9.77□□□□□ -0.85
ZEB1-211ENST00000558440 FAM174AQ8TBP5 190 aa9.77□□□□□ -0.85
ZEB1-211ENST00000558440 A2MP01023 1474 aa9.77□□□□□ -0.85
ZEB1-211ENST00000558440 GPATCH8Q9UKJ3 1502 aaKnown RBP9.77□□□□□ -0.85
ZEB1-211ENST00000558440 HNRNPMP52272 730 aaKnown RBP eCLIP9.76□□□□□ -0.854e-6■■■■□ 20.1
ZEB1-211ENST00000558440 TCOF1Q13428 1488 aaKnown RBP9.76□□□□□ -0.85
ZEB1-211ENST00000558440 PTPRKQ15262 1439 aa9.75□□□□□ -0.85
ZEB1-211ENST00000558440 KIAA1107Q9UPP5 1409 aa9.75□□□□□ -0.85
ZEB1-211ENST00000558440 C4orf48Q5BLP8 95 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms