RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 KNSTRNQ9Y448 316 aa16.97■□□□□ 0.31
CDC42BPB-202ENST00000558321 WASHC2AQ641Q2 1341 aa16.96■□□□□ 0.31
CDC42BPB-202ENST00000558321 ANO8Q9HCE9 1232 aaPredicted RBP16.96■□□□□ 0.31
CDC42BPB-202ENST00000558321 MEGF6O75095 1541 aa16.96■□□□□ 0.3
CDC42BPB-202ENST00000558321 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
CDC42BPB-202ENST00000558321 SPON1Q9HCB6 807 aa16.95■□□□□ 0.3
CDC42BPB-202ENST00000558321 LRP5O75197 1615 aa16.94■□□□□ 0.3
CDC42BPB-202ENST00000558321 RGPD2P0DJD1 1756 aa16.94■□□□□ 0.3
CDC42BPB-202ENST00000558321 RGPD3A6NKT7 1758 aaPredicted RBP16.93■□□□□ 0.3
CDC42BPB-202ENST00000558321 RGPD4Q7Z3J3 1758 aa16.93■□□□□ 0.3
CDC42BPB-202ENST00000558321 SLC15A2Q16348 729 aa16.93■□□□□ 0.3
CDC42BPB-202ENST00000558321 PPP1R1BQ9UD71 204 aaPredicted RBP16.93■□□□□ 0.3
CDC42BPB-202ENST00000558321 NHSQ6T4R5 1651 aa16.93■□□□□ 0.3
CDC42BPB-202ENST00000558321 KAT6BQ8WYB5 2073 aa16.92■□□□□ 0.3
CDC42BPB-202ENST00000558321 EYA1Q99502 592 aa16.92■□□□□ 0.3
CDC42BPB-202ENST00000558321 KIF7Q2M1P5 1343 aa16.92■□□□□ 0.3
CDC42BPB-202ENST00000558321 PCDH11XQ9BZA7 1347 aa16.92■□□□□ 0.3
CDC42BPB-202ENST00000558321 PCDH11YQ9BZA8 1340 aa16.92■□□□□ 0.3
CDC42BPB-202ENST00000558321 NSD2O96028 1365 aa16.91■□□□□ 0.3
CDC42BPB-202ENST00000558321 SPG7Q9UQ90 795 aa16.91■□□□□ 0.3
CDC42BPB-202ENST00000558321 EIF4A2Q14240 407 aaKnown RBP16.9■□□□□ 0.3
CDC42BPB-202ENST00000558321 SLC27A3Q5K4L6 730 aa16.9■□□□□ 0.3
CDC42BPB-202ENST00000558321 ZBTB7AO95365 584 aa16.89■□□□□ 0.29
CDC42BPB-202ENST00000558321 PDGFDQ9GZP0 370 aaPredicted RBP16.89■□□□□ 0.29
CDC42BPB-202ENST00000558321 LRRC4BQ9NT99 713 aa16.89■□□□□ 0.29
CDC42BPB-202ENST00000558321 BTAF1O14981 1849 aa16.88■□□□□ 0.29
CDC42BPB-202ENST00000558321 MAP2P11137 1827 aaKnown RBP16.88■□□□□ 0.29
CDC42BPB-202ENST00000558321 CYP27B1O15528 508 aa16.87■□□□□ 0.29
CDC42BPB-202ENST00000558321 KCNQ4P56696 695 aa16.87■□□□□ 0.29
CDC42BPB-202ENST00000558321 ATF5Q9Y2D1 282 aaPredicted RBP16.87■□□□□ 0.29
CDC42BPB-202ENST00000558321 MPRIPQ6WCQ1 1025 aa16.86■□□□□ 0.29
CDC42BPB-202ENST00000558321 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.85■□□□□ 0.292e-6■■□□□ 13
CDC42BPB-202ENST00000558321 CCNL1Q9UK58 526 aaPredicted RBP16.85■□□□□ 0.29
CDC42BPB-202ENST00000558321 CNGB1Q14028 1251 aaPredicted RBP16.84■□□□□ 0.29
CDC42BPB-202ENST00000558321 AMER1Q5JTC6 1135 aaPredicted RBP16.84■□□□□ 0.29
CDC42BPB-202ENST00000558321 ANKRD26Q9UPS8 1709 aa16.84■□□□□ 0.29
CDC42BPB-202ENST00000558321 NCAPD2Q15021 1401 aa16.83■□□□□ 0.28
CDC42BPB-202ENST00000558321 ZNF827Q17R98 1081 aa16.83■□□□□ 0.28
CDC42BPB-202ENST00000558321 IFNL2Q8IZJ0 200 aa16.83■□□□□ 0.28
CDC42BPB-202ENST00000558321 DOT1LQ8TEK3 1739 aa16.83■□□□□ 0.28
CDC42BPB-202ENST00000558321 TFCP2L1Q9NZI6 479 aa16.83■□□□□ 0.28
CDC42BPB-202ENST00000558321 SHANK3Q9BYB0 1731 aa16.82■□□□□ 0.28
CDC42BPB-202ENST00000558321 CC2D1BQ5T0F9 858 aaKnown RBP16.82■□□□□ 0.28
CDC42BPB-202ENST00000558321 AKT1S1Q96B36 256 aa16.82■□□□□ 0.28
CDC42BPB-202ENST00000558321 MTFR1LQ9H019 292 aa16.82■□□□□ 0.28
CDC42BPB-202ENST00000558321 IGSF1Q8N6C5 1336 aa16.81■□□□□ 0.28
CDC42BPB-202ENST00000558321 NKX1-1Q15270 411 aaPredicted RBP16.81■□□□□ 0.28
CDC42BPB-202ENST00000558321 DCAF8L1A6NGE4 600 aa16.8■□□□□ 0.28
CDC42BPB-202ENST00000558321 PER1O15534 1290 aaPredicted RBP16.8■□□□□ 0.28
CDC42BPB-202ENST00000558321 PHKG2P15735 406 aa16.8■□□□□ 0.28
CDC42BPB-202ENST00000558321 HMGB2P26583 209 aaKnown RBP16.8■□□□□ 0.28
CDC42BPB-202ENST00000558321 PLEKHO1Q53GL0 409 aaPredicted RBP16.8■□□□□ 0.28
CDC42BPB-202ENST00000558321 PIGBQ92521 554 aa16.8■□□□□ 0.28
CDC42BPB-202ENST00000558321 SMARCC1Q92922 1105 aaPredicted RBP16.8■□□□□ 0.28
CDC42BPB-202ENST00000558321 MSH5O43196 834 aa16.79■□□□□ 0.28
CDC42BPB-202ENST00000558321 PTGER2P43116 358 aa16.79■□□□□ 0.28
CDC42BPB-202ENST00000558321 MTHFSP49914 203 aa16.79■□□□□ 0.28
CDC42BPB-202ENST00000558321 TMOD3Q9NYL9 352 aa16.79■□□□□ 0.28
CDC42BPB-202ENST00000558321 PALLDQ8WX93 1383 aa16.78■□□□□ 0.28
CDC42BPB-202ENST00000558321 SULT6B1Q6IMI4 303 aa16.78■□□□□ 0.28
CDC42BPB-202ENST00000558321 CASZ1Q86V15 1759 aa16.78■□□□□ 0.28
CDC42BPB-202ENST00000558321 AMOTQ4VCS5 1084 aa16.77■□□□□ 0.28
CDC42BPB-202ENST00000558321 SLC16A10Q8TF71 515 aa16.77■□□□□ 0.28
CDC42BPB-202ENST00000558321 HSP90AB1P08238 724 aaKnown RBP16.76■□□□□ 0.27
CDC42BPB-202ENST00000558321 IL13P35225 146 aa16.76■□□□□ 0.27
CDC42BPB-202ENST00000558321 ZNF530Q6P9A1 599 aaPredicted RBP16.76■□□□□ 0.27
CDC42BPB-202ENST00000558321 AEBP1Q8IUX7 1158 aa16.76■□□□□ 0.27
CDC42BPB-202ENST00000558321 PAPPAQ13219 1627 aa16.76■□□□□ 0.27
CDC42BPB-202ENST00000558321 PKD1L3Q7Z443 1732 aa16.76■□□□□ 0.27
CDC42BPB-202ENST00000558321 PNPLA7Q6ZV29 1317 aa16.75■□□□□ 0.27
CDC42BPB-202ENST00000558321 C1orf141Q5JVX7 400 aa16.75■□□□□ 0.27
CDC42BPB-202ENST00000558321 ARXQ96QS3 562 aa16.75■□□□□ 0.27
CDC42BPB-202ENST00000558321 DCAF5Q96JK2 942 aa16.74■□□□□ 0.27
CDC42BPB-202ENST00000558321 ASAP1Q9ULH1 1129 aa16.74■□□□□ 0.27
CDC42BPB-202ENST00000558321 POLD1P28340 1107 aa16.73■□□□□ 0.27
CDC42BPB-202ENST00000558321 PLEKHG2Q9H7P9 1386 aa16.73■□□□□ 0.27
CDC42BPB-202ENST00000558321 LY75O60449 1722 aa16.73■□□□□ 0.27
CDC42BPB-202ENST00000558321 LOC102724428A0A0B4J2F2 783 aa16.72■□□□□ 0.27
CDC42BPB-202ENST00000558321 ERVV-2B6SEH9 535 aa16.72■□□□□ 0.27
CDC42BPB-202ENST00000558321 DIAPH1O60610 1272 aaKnown RBP16.72■□□□□ 0.27
CDC42BPB-202ENST00000558321 SIK1P57059 783 aa16.72■□□□□ 0.27
CDC42BPB-202ENST00000558321 CABP4P57796 275 aa16.72■□□□□ 0.27
CDC42BPB-202ENST00000558321 COL23A1Q86Y22 540 aaPredicted RBP16.72■□□□□ 0.27
CDC42BPB-202ENST00000558321 AK7Q96M32 723 aa16.72■□□□□ 0.27
CDC42BPB-202ENST00000558321 SGIP1Q9BQI5 828 aa16.72■□□□□ 0.27
CDC42BPB-202ENST00000558321 FHDC1Q9C0D6 1143 aaPredicted RBP16.72■□□□□ 0.27
CDC42BPB-202ENST00000558321 HMOX1P09601 288 aa16.71■□□□□ 0.27
CDC42BPB-202ENST00000558321 FLAD1Q8NFF5 587 aa16.71■□□□□ 0.27
CDC42BPB-202ENST00000558321 NPC1L1Q9UHC9 1359 aa16.7■□□□□ 0.26
CDC42BPB-202ENST00000558321 ATP6V1AP38606 617 aa16.7■□□□□ 0.26
CDC42BPB-202ENST00000558321 KLHL34Q8N239 644 aa16.7■□□□□ 0.26
CDC42BPB-202ENST00000558321 SYT17Q9BSW7 474 aa16.7■□□□□ 0.26
CDC42BPB-202ENST00000558321 ATG3Q9NT62 314 aa16.7■□□□□ 0.26
CDC42BPB-202ENST00000558321 TOGARAM1Q9Y4F4 1720 aa16.7■□□□□ 0.26
CDC42BPB-202ENST00000558321 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
CDC42BPB-202ENST00000558321 ITGB4P16144 1822 aa16.68■□□□□ 0.26
CDC42BPB-202ENST00000558321 U2SURPO15042 1029 aaKnown RBP16.68■□□□□ 0.26
CDC42BPB-202ENST00000558321 KDRP35968 1356 aa16.67■□□□□ 0.26
CDC42BPB-202ENST00000558321 PHF14O94880 888 aa16.67■□□□□ 0.26
CDC42BPB-202ENST00000558321 MSL1Q68DK7 614 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms