RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 TTC21AQ8NDW8 1320 aa14.65□□□□□ -0.06
ABCD4-227ENST00000557554 CENPJQ9HC77 1338 aaPredicted RBP14.65□□□□□ -0.06
ABCD4-227ENST00000557554 KIAA1210Q9ULL0 1709 aa14.64□□□□□ -0.07
ABCD4-227ENST00000557554 SLC34A2O95436 690 aa14.64□□□□□ -0.07
ABCD4-227ENST00000557554 HTRA3P83110 453 aa14.64□□□□□ -0.07
ABCD4-227ENST00000557554 CCNL1Q9UK58 526 aaPredicted RBP14.64□□□□□ -0.07
ABCD4-227ENST00000557554 IGSF1Q8N6C5 1336 aa14.64□□□□□ -0.07
ABCD4-227ENST00000557554 ANKRD24Q8TF21 1146 aa14.62□□□□□ -0.07
ABCD4-227ENST00000557554 SYTL4Q96C24 671 aaPredicted RBP14.62□□□□□ -0.07
ABCD4-227ENST00000557554 WWC3Q9ULE0 1092 aa14.62□□□□□ -0.07
ABCD4-227ENST00000557554 RBM46Q8TBY0 533 aaKnown RBP14.61□□□□□ -0.07
ABCD4-227ENST00000557554 NMRK2Q9NPI5 230 aa14.61□□□□□ -0.07
ABCD4-227ENST00000557554 USP31Q70CQ4 1352 aa14.6□□□□□ -0.07
ABCD4-227ENST00000557554 CICQ96RK0 1608 aaPredicted RBP14.6□□□□□ -0.07
ABCD4-227ENST00000557554 FLAD1Q8NFF5 587 aa14.59□□□□□ -0.07
ABCD4-227ENST00000557554 AMIGO3Q86WK7 504 aa14.58□□□□□ -0.08
ABCD4-227ENST00000557554 DOT1LQ8TEK3 1739 aa14.58□□□□□ -0.08
ABCD4-227ENST00000557554 LTN1O94822 1766 aa14.57□□□□□ -0.08
ABCD4-227ENST00000557554 USP54Q70EL1 1684 aa14.57□□□□□ -0.08
ABCD4-227ENST00000557554 FSTL1Q12841 308 aa14.56□□□□□ -0.08
ABCD4-227ENST00000557554 TAF1LQ8IZX4 1826 aa14.56□□□□□ -0.08
ABCD4-227ENST00000557554 EVC2Q86UK5 1308 aa14.56□□□□□ -0.08
ABCD4-227ENST00000557554 C5P01031 1676 aa14.55□□□□□ -0.08
ABCD4-227ENST00000557554 USP47Q96K76 1375 aa14.55□□□□□ -0.08
ABCD4-227ENST00000557554 KTN1Q86UP2 1357 aaKnown RBP14.54□□□□□ -0.08
ABCD4-227ENST00000557554 RAB3GAP2Q9H2M9 1393 aa14.54□□□□□ -0.08
ABCD4-227ENST00000557554 SMIM5Q71RC9 77 aa14.53□□□□□ -0.08
ABCD4-227ENST00000557554 NME9Q86XW9 330 aa14.53□□□□□ -0.08
ABCD4-227ENST00000557554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.53□□□□□ -0.08
ABCD4-227ENST00000557554 ZCRB1Q8TBF4 217 aaKnown RBP14.53□□□□□ -0.08
ABCD4-227ENST00000557554 IP6K1Q92551 441 aa14.53□□□□□ -0.08
ABCD4-227ENST00000557554 TOGARAM1Q9Y4F4 1720 aa14.52□□□□□ -0.08
ABCD4-227ENST00000557554 SBNO2Q9Y2G9 1366 aa14.51□□□□□ -0.09
ABCD4-227ENST00000557554 HMGB2P26583 209 aaKnown RBP14.51□□□□□ -0.09
ABCD4-227ENST00000557554 MON2Q7Z3U7 1717 aa14.51□□□□□ -0.09
ABCD4-227ENST00000557554 KIAA1551Q9HCM1 1747 aa14.51□□□□□ -0.09
ABCD4-227ENST00000557554 UBR3Q6ZT12 1888 aa14.5□□□□□ -0.09
ABCD4-227ENST00000557554 KIF13BQ9NQT8 1826 aa14.5□□□□□ -0.09
ABCD4-227ENST00000557554 PXDNLA1KZ92 1463 aa14.5□□□□□ -0.09
ABCD4-227ENST00000557554 C4BP0C0L5 1744 aa14.49□□□□□ -0.09
ABCD4-227ENST00000557554 FAM208AQ9UK61 1670 aaKnown RBP14.49□□□□□ -0.09
ABCD4-227ENST00000557554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.49□□□□□ -0.09
ABCD4-227ENST00000557554 HSPA1AP0DMV8 641 aaKnown RBP14.49□□□□□ -0.09
ABCD4-227ENST00000557554 HSPA1BP0DMV9 641 aaKnown RBP14.49□□□□□ -0.09
ABCD4-227ENST00000557554 TGFB2P61812 414 aa14.49□□□□□ -0.09
ABCD4-227ENST00000557554 ARHGAP27Q6ZUM4 889 aa14.49□□□□□ -0.09
ABCD4-227ENST00000557554 A0A0G2JLW4 131 aa14.48□□□□□ -0.09
ABCD4-227ENST00000557554 CD163L1Q9NR16 1453 aa14.48□□□□□ -0.09
ABCD4-227ENST00000557554 PALLDQ8WX93 1383 aa14.47□□□□□ -0.09
ABCD4-227ENST00000557554 N4BP2Q86UW6 1770 aaPredicted RBP14.47□□□□□ -0.09
ABCD4-227ENST00000557554 MEGF6O75095 1541 aa14.47□□□□□ -0.09
ABCD4-227ENST00000557554 C16orf71Q8IYS4 520 aaPredicted RBP14.47□□□□□ -0.09
ABCD4-227ENST00000557554 LTV1Q96GA3 475 aaPredicted RBP14.47□□□□□ -0.09
ABCD4-227ENST00000557554 BCS1LQ9Y276 419 aa14.47□□□□□ -0.09
ABCD4-227ENST00000557554 RGPD2P0DJD1 1756 aa14.47□□□□□ -0.09
ABCD4-227ENST00000557554 SSFA2P28290 1259 aa14.46□□□□□ -0.09
ABCD4-227ENST00000557554 C9orf131Q5VYM1 1079 aa14.46□□□□□ -0.09
ABCD4-227ENST00000557554 AK7Q96M32 723 aa14.46□□□□□ -0.09
ABCD4-227ENST00000557554 RRAGCQ9HB90 399 aa14.46□□□□□ -0.09
ABCD4-227ENST00000557554 C10orf71Q711Q0 1435 aa14.46□□□□□ -0.09
ABCD4-227ENST00000557554 PHF14O94880 888 aa14.45□□□□□ -0.1
ABCD4-227ENST00000557554 KCNA3P22001 575 aa14.45□□□□□ -0.1
ABCD4-227ENST00000557554 PCDH10Q9P2E7 1040 aa14.45□□□□□ -0.1
ABCD4-227ENST00000557554 BRCA1P38398 1863 aaKnown RBP14.44□□□□□ -0.1
ABCD4-227ENST00000557554 MMP10P09238 476 aa14.44□□□□□ -0.1
ABCD4-227ENST00000557554 KCPQ6ZWJ8 1503 aa14.44□□□□□ -0.1
ABCD4-227ENST00000557554 HOXC9P31274 260 aa14.43□□□□□ -0.1
ABCD4-227ENST00000557554 NBPF6Q5VWK0 638 aa14.43□□□□□ -0.1
ABCD4-227ENST00000557554 MPRIPQ6WCQ1 1025 aa14.43□□□□□ -0.1
ABCD4-227ENST00000557554 SMC1BQ8NDV3 1235 aa14.43□□□□□ -0.1
ABCD4-227ENST00000557554 NBPF4Q96M43 638 aa14.43□□□□□ -0.1
ABCD4-227ENST00000557554 MAP2P11137 1827 aaKnown RBP14.43□□□□□ -0.1
ABCD4-227ENST00000557554 CGNL1Q0VF96 1302 aa14.42□□□□□ -0.1
ABCD4-227ENST00000557554 KDM2BQ8NHM5 1336 aa14.42□□□□□ -0.1
ABCD4-227ENST00000557554 DPEP1P16444 411 aa14.42□□□□□ -0.1
ABCD4-227ENST00000557554 LINC00116Q8NCU8 138 aa14.42□□□□□ -0.1
ABCD4-227ENST00000557554 PLEKHG2Q9H7P9 1386 aa14.42□□□□□ -0.1
ABCD4-227ENST00000557554 MAP3K19Q56UN5 1328 aa14.41□□□□□ -0.1
ABCD4-227ENST00000557554 NSD3Q9BZ95 1437 aa14.41□□□□□ -0.1
ABCD4-227ENST00000557554 FCHSD2O94868 740 aa14.41□□□□□ -0.1
ABCD4-227ENST00000557554 FBLN1P23142 703 aa14.41□□□□□ -0.1
ABCD4-227ENST00000557554 SMARCC1Q92922 1105 aaPredicted RBP14.41□□□□□ -0.1
ABCD4-227ENST00000557554 ITGB4P16144 1822 aa14.41□□□□□ -0.1
ABCD4-227ENST00000557554 ARFGEF1Q9Y6D6 1849 aa14.41□□□□□ -0.1
ABCD4-227ENST00000557554 SBF1O95248 1867 aa14.4□□□□□ -0.1
ABCD4-227ENST00000557554 PIGBQ92521 554 aa14.4□□□□□ -0.1
ABCD4-227ENST00000557554 SLC12A5Q9H2X9 1139 aa14.4□□□□□ -0.1
ABCD4-227ENST00000557554 PKD1L3Q7Z443 1732 aa14.39□□□□□ -0.11
ABCD4-227ENST00000557554 CYP27B1O15528 508 aa14.39□□□□□ -0.11
ABCD4-227ENST00000557554 EDC4Q6P2E9 1401 aaKnown RBP14.39□□□□□ -0.11
ABCD4-227ENST00000557554 LOC102724428A0A0B4J2F2 783 aa14.38□□□□□ -0.11
ABCD4-227ENST00000557554 SIK1P57059 783 aa14.38□□□□□ -0.11
ABCD4-227ENST00000557554 ITPK1Q13572 414 aa14.38□□□□□ -0.11
ABCD4-227ENST00000557554 NLGN1Q8N2Q7 840 aa14.38□□□□□ -0.11
ABCD4-227ENST00000557554 DCAF5Q96JK2 942 aa14.38□□□□□ -0.11
ABCD4-227ENST00000557554 TNRC6CQ9HCJ0 1690 aaKnown RBP14.38□□□□□ -0.11
ABCD4-227ENST00000557554 GNPATO15228 680 aa14.36□□□□□ -0.11
ABCD4-227ENST00000557554 AMPHP49418 695 aa14.36□□□□□ -0.11
ABCD4-227ENST00000557554 TMF1P82094 1093 aa14.36□□□□□ -0.11
ABCD4-227ENST00000557554 USHBP1Q8N6Y0 703 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms