RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 FOXK2Q01167 660 aa3.23□□□□□ -1.89
HIF1A-212ENST00000557538 INTS6LQ5JSJ4 861 aaKnown RBP3.23□□□□□ -1.89
HIF1A-212ENST00000557538 LARP1Q6PKG0 1096 aaKnown RBP3.23□□□□□ -1.89
HIF1A-212ENST00000557538 TXNDC2Q86VQ3 553 aa3.23□□□□□ -1.89
HIF1A-212ENST00000557538 DNAAF2Q9NVR5 837 aaKnown RBP3.23□□□□□ -1.89
HIF1A-212ENST00000557538 PLA2G2EQ9NZK7 142 aa3.23□□□□□ -1.89
HIF1A-212ENST00000557538 MKRN1Q9UHC7 482 aaKnown RBP3.23□□□□□ -1.89
HIF1A-212ENST00000557538 GNRH1P01148 92 aa3.23□□□□□ -1.89
HIF1A-212ENST00000557538 HIRAP54198 1017 aaPredicted RBP3.23□□□□□ -1.89
HIF1A-212ENST00000557538 MTFR1Q15390 333 aa3.23□□□□□ -1.89
HIF1A-212ENST00000557538 CC2D2BQ6DHV5 1058 aa3.23□□□□□ -1.89
HIF1A-212ENST00000557538 NOVA2Q9UNW9 492 aaKnown RBP3.23□□□□□ -1.89
HIF1A-212ENST00000557538 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.23□□□□□ -1.89
HIF1A-212ENST00000557538 SMCPP49901 116 aaPredicted RBP3.23□□□□□ -1.89
HIF1A-212ENST00000557538 CLDN10P78369 228 aa3.23□□□□□ -1.89
HIF1A-212ENST00000557538 EGFL7Q9UHF1 273 aa3.23□□□□□ -1.89
HIF1A-212ENST00000557538 SSFA2P28290 1259 aa3.22□□□□□ -1.89
HIF1A-212ENST00000557538 EPHA4P54764 986 aa3.22□□□□□ -1.89
HIF1A-212ENST00000557538 NCOA4Q13772 614 aa3.22□□□□□ -1.89
HIF1A-212ENST00000557538 NPR3P17342 541 aa3.22□□□□□ -1.89
HIF1A-212ENST00000557538 WEE1P30291 646 aa3.22□□□□□ -1.89
HIF1A-212ENST00000557538 LINC01559Q495D7 138 aa3.22□□□□□ -1.89
HIF1A-212ENST00000557538 FAM200AQ8TCP9 573 aa3.22□□□□□ -1.89
HIF1A-212ENST00000557538 EMILIN1Q9Y6C2 1016 aa3.22□□□□□ -1.89
HIF1A-212ENST00000557538 ERVH48-1M5A8F1 160 aa3.21□□□□□ -1.89
HIF1A-212ENST00000557538 AVPP01185 164 aa3.21□□□□□ -1.89
HIF1A-212ENST00000557538 TSGA10IPQ3SY00 556 aa3.21□□□□□ -1.89
HIF1A-212ENST00000557538 CRTC2Q53ET0 693 aaPredicted RBP3.21□□□□□ -1.89
HIF1A-212ENST00000557538 PGPEP1Q9NXJ5 209 aa3.21□□□□□ -1.89
HIF1A-212ENST00000557538 GPC1P35052 558 aa3.21□□□□□ -1.9
HIF1A-212ENST00000557538 MYT1Q01538 1121 aa3.21□□□□□ -1.9
HIF1A-212ENST00000557538 OCLNQ16625 522 aa3.21□□□□□ -1.9
HIF1A-212ENST00000557538 PHLDB3Q6NSJ2 640 aa3.21□□□□□ -1.9
HIF1A-212ENST00000557538 VASH1Q7L8A9 365 aaPredicted RBP3.21□□□□□ -1.9
HIF1A-212ENST00000557538 CYP2U1Q7Z449 544 aa3.21□□□□□ -1.9
HIF1A-212ENST00000557538 OSBPL3Q9H4L5 887 aa3.21□□□□□ -1.9
HIF1A-212ENST00000557538 MYCP01106 439 aaPredicted RBP3.21□□□□□ -1.9
HIF1A-212ENST00000557538 IGFBP4P22692 258 aa3.21□□□□□ -1.9
HIF1A-212ENST00000557538 TMEM164Q5U3C3 297 aa3.21□□□□□ -1.9
HIF1A-212ENST00000557538 CRIPAKQ8N1N5 446 aa3.21□□□□□ -1.9
HIF1A-212ENST00000557538 EHBP1Q8NDI1 1231 aa3.21□□□□□ -1.9
HIF1A-212ENST00000557538 SLAIN2Q9P270 581 aa3.21□□□□□ -1.9
HIF1A-212ENST00000557538 CDK2AP1O14519 115 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 SCNN1DP51172 638 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 SEC13P55735 322 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 GTF2IP78347 998 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 ESCO1Q5FWF5 840 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 CCDC116Q8IYX3 515 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 OGFOD1Q8N543 542 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 MRGPRX2Q96LB1 330 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 GPC6Q9Y625 555 aaPredicted RBP3.2□□□□□ -1.9
HIF1A-212ENST00000557538 TMEM229AB2RXF0 380 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 BACH1O14867 736 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 FOXO3O43524 673 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 TRIM67Q6ZTA4 783 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 ZNF295-AS1Q8N0V1 137 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 RASA1P20936 1047 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 WDR44Q5JSH3 913 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 ZNF697Q5TEC3 545 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 ARID3AQ99856 593 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 CXXC1Q9P0U4 656 aaPredicted RBP3.2□□□□□ -1.9
HIF1A-212ENST00000557538 PCDHB11Q9Y5F2 797 aa3.2□□□□□ -1.9
HIF1A-212ENST00000557538 INHAP05111 366 aa3.19□□□□□ -1.9
HIF1A-212ENST00000557538 SMPD1P17405 629 aa3.19□□□□□ -1.9
HIF1A-212ENST00000557538 MAGEB6P1A0A0J9YX57 407 aa3.19□□□□□ -1.9
HIF1A-212ENST00000557538 PTCD1O75127 700 aaKnown RBP3.19□□□□□ -1.9
HIF1A-212ENST00000557538 ADH1AP07327 375 aa3.19□□□□□ -1.9
HIF1A-212ENST00000557538 ARID4AP29374 1257 aaPredicted RBP3.19□□□□□ -1.9
HIF1A-212ENST00000557538 RNF144AP50876 292 aaPredicted RBP3.19□□□□□ -1.9
HIF1A-212ENST00000557538 KDF1Q8NAX2 398 aaPredicted RBP3.19□□□□□ -1.9
HIF1A-212ENST00000557538 ZNF358Q9NW07 568 aa3.19□□□□□ -1.9
HIF1A-212ENST00000557538 SPATA31C2B4DYI2 1134 aa3.18□□□□□ -1.9
HIF1A-212ENST00000557538 DPYDQ12882 1025 aa3.18□□□□□ -1.9
HIF1A-212ENST00000557538 PPP1R26Q5T8A7 1209 aaPredicted RBP3.18□□□□□ -1.9
HIF1A-212ENST00000557538 CCDC102BQ68D86 513 aa3.18□□□□□ -1.9
HIF1A-212ENST00000557538 CARD14Q9BXL6 1004 aa3.18□□□□□ -1.9
HIF1A-212ENST00000557538 ZBTB7CA1YPR0 619 aa3.18□□□□□ -1.9
HIF1A-212ENST00000557538 NR3C2P08235 984 aa3.18□□□□□ -1.9
HIF1A-212ENST00000557538 AGERQ15109 404 aa3.18□□□□□ -1.9
HIF1A-212ENST00000557538 TEAD4Q15561 434 aa3.18□□□□□ -1.9
HIF1A-212ENST00000557538 STK32AQ8WU08 396 aa3.18□□□□□ -1.9
HIF1A-212ENST00000557538 FHDC1Q9C0D6 1143 aaPredicted RBP3.18□□□□□ -1.9
HIF1A-212ENST00000557538 KIAA1024Q9UPX6 916 aa3.18□□□□□ -1.9
HIF1A-212ENST00000557538 DGAT1O75907 488 aa3.18□□□□□ -1.9
HIF1A-212ENST00000557538 ERCC3P19447 782 aa3.18□□□□□ -1.9
HIF1A-212ENST00000557538 PTGIRP43119 386 aa3.18□□□□□ -1.9
HIF1A-212ENST00000557538 C1orf53Q5VUE5 145 aa3.18□□□□□ -1.9
HIF1A-212ENST00000557538 IQSEC3Q9UPP2 1182 aaPredicted RBP3.18□□□□□ -1.9
HIF1A-212ENST00000557538 RFX1P22670 979 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 ADD1P35611 737 aaKnown RBP3.17□□□□□ -1.9
HIF1A-212ENST00000557538 SMTNP53814 917 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 TRIM26Q12899 539 aaPredicted RBP3.17□□□□□ -1.9
HIF1A-212ENST00000557538 CLN3Q13286 438 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 COL19A1Q14993 1142 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 LAPTM4AQ15012 233 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 CTC1Q2NKJ3 1217 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 ZNF784Q8NCA9 323 aaPredicted RBP3.17□□□□□ -1.9
HIF1A-212ENST00000557538 MYO19Q96H55 970 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 GRIP2Q9C0E4 1043 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 GDF10P55107 478 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms