RNA–Protein interactions for RNA: ENST00000556953.1

NGDN-212, Transcript of neuroguidin, humanhuman

TSL 2

Gene NGDN, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-212ENST00000556953 RAPGEF4Q8WZA2 1011 aa16.19■□□□□ 0.18
NGDN-212ENST00000556953 RNF39Q9H2S5 420 aa16.19■□□□□ 0.18
NGDN-212ENST00000556953 PER1O15534 1290 aaPredicted RBP16.18■□□□□ 0.18
NGDN-212ENST00000556953 USHBP1Q8N6Y0 703 aa16.18■□□□□ 0.18
NGDN-212ENST00000556953 ZCRB1Q8TBF4 217 aaKnown RBP16.18■□□□□ 0.18
NGDN-212ENST00000556953 MEGF6O75095 1541 aa16.18■□□□□ 0.18
NGDN-212ENST00000556953 PLSCR1O15162 318 aa16.17■□□□□ 0.18
NGDN-212ENST00000556953 TATP17735 454 aaPredicted RBP16.17■□□□□ 0.18
NGDN-212ENST00000556953 DDX54Q8TDD1 881 aaKnown RBP16.17■□□□□ 0.18
NGDN-212ENST00000556953 NCAPD2Q15021 1401 aa16.15■□□□□ 0.18
NGDN-212ENST00000556953 RGPD3A6NKT7 1758 aaPredicted RBP16.15■□□□□ 0.18
NGDN-212ENST00000556953 RGPD4Q7Z3J3 1758 aa16.15■□□□□ 0.18
NGDN-212ENST00000556953 NHSQ6T4R5 1651 aa16.14■□□□□ 0.18
NGDN-212ENST00000556953 EIF4A2Q14240 407 aaKnown RBP16.14■□□□□ 0.17
NGDN-212ENST00000556953 PTF1AQ7RTS3 328 aa16.14■□□□□ 0.17
NGDN-212ENST00000556953 EYA1Q99502 592 aa16.14■□□□□ 0.17
NGDN-212ENST00000556953 RREB1Q92766 1687 aa16.14■□□□□ 0.17
NGDN-212ENST00000556953 NPC1L1Q9UHC9 1359 aa16.13■□□□□ 0.17
NGDN-212ENST00000556953 KCNQ2O43526 872 aa16.13■□□□□ 0.17
NGDN-212ENST00000556953 ACSBG1Q96GR2 724 aa16.13■□□□□ 0.17
NGDN-212ENST00000556953 NCBP3Q53F19 620 aaKnown RBP16.12■□□□□ 0.17
NGDN-212ENST00000556953 CC2D1BQ5T0F9 858 aaKnown RBP16.12■□□□□ 0.17
NGDN-212ENST00000556953 PCDH11XQ9BZA7 1347 aa16.12■□□□□ 0.17
NGDN-212ENST00000556953 PCDH11YQ9BZA8 1340 aa16.12■□□□□ 0.17
NGDN-212ENST00000556953 SHANK3Q9BYB0 1731 aa16.11■□□□□ 0.17
NGDN-212ENST00000556953 NBPF14Q5TI25 921 aa16.11■□□□□ 0.17
NGDN-212ENST00000556953 NUP188Q5SRE5 1749 aa16.11■□□□□ 0.17
NGDN-212ENST00000556953 PLEKHG2Q9H7P9 1386 aa16.1■□□□□ 0.17
NGDN-212ENST00000556953 PSDA5PKW4 1024 aaPredicted RBP16.09■□□□□ 0.17
NGDN-212ENST00000556953 R3HDM1Q15032 1099 aaKnown RBP16.09■□□□□ 0.17
NGDN-212ENST00000556953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.09■□□□□ 0.176e-6■□□□□ 8.9
NGDN-212ENST00000556953 SPG7Q9UQ90 795 aa16.09■□□□□ 0.17
NGDN-212ENST00000556953 IGSF1Q8N6C5 1336 aa16.09■□□□□ 0.17
NGDN-212ENST00000556953 KAT6BQ8WYB5 2073 aa16.09■□□□□ 0.17
NGDN-212ENST00000556953 PKD1L3Q7Z443 1732 aa16.08■□□□□ 0.17
NGDN-212ENST00000556953 BTAF1O14981 1849 aa16.08■□□□□ 0.16
NGDN-212ENST00000556953 SRCAPQ6ZRS2 3230 aa16.07■□□□□ 0.16
NGDN-212ENST00000556953 PRIM1P49642 420 aaKnown RBP16.07■□□□□ 0.16
NGDN-212ENST00000556953 MTHFSP49914 203 aa16.07■□□□□ 0.16
NGDN-212ENST00000556953 TXNRD1Q16881 649 aa16.07■□□□□ 0.16
NGDN-212ENST00000556953 SYTL4Q96C24 671 aaPredicted RBP16.07■□□□□ 0.16
NGDN-212ENST00000556953 DOT1LQ8TEK3 1739 aa16.06■□□□□ 0.16
NGDN-212ENST00000556953 CYP27B1O15528 508 aa16.06■□□□□ 0.16
NGDN-212ENST00000556953 PROM2Q8N271 834 aa16.06■□□□□ 0.16
NGDN-212ENST00000556953 IL13P35225 146 aa16.05■□□□□ 0.16
NGDN-212ENST00000556953 CNGB1Q14028 1251 aaPredicted RBP16.04■□□□□ 0.16
NGDN-212ENST00000556953 NKX1-1Q15270 411 aaPredicted RBP16.03■□□□□ 0.16
NGDN-212ENST00000556953 AMOTQ4VCS5 1084 aa16.02■□□□□ 0.16
NGDN-212ENST00000556953 SLC27A3Q5K4L6 730 aa16.02■□□□□ 0.16
NGDN-212ENST00000556953 IFNL2Q8IZJ0 200 aa16.02■□□□□ 0.16
NGDN-212ENST00000556953 KDRP35968 1356 aa16.01■□□□□ 0.15
NGDN-212ENST00000556953 DIAPH1O60610 1272 aaKnown RBP16.01■□□□□ 0.15
NGDN-212ENST00000556953 PHKG2P15735 406 aa16.01■□□□□ 0.15
NGDN-212ENST00000556953 C1QBPQ07021 282 aaKnown RBP16.01■□□□□ 0.15
NGDN-212ENST00000556953 PLEKHO1Q53GL0 409 aaPredicted RBP16.01■□□□□ 0.15
NGDN-212ENST00000556953 SULT6B1Q6IMI4 303 aa16.01■□□□□ 0.15
NGDN-212ENST00000556953 ANO8Q9HCE9 1232 aaPredicted RBP16.01■□□□□ 0.15
NGDN-212ENST00000556953 ZEB1P37275 1124 aaPredicted RBP16■□□□□ 0.15
NGDN-212ENST00000556953 AEBP1Q8IUX7 1158 aa16■□□□□ 0.15
NGDN-212ENST00000556953 STK32BQ9NY57 414 aa16■□□□□ 0.15
NGDN-212ENST00000556953 LRP5O75197 1615 aa16■□□□□ 0.15
NGDN-212ENST00000556953 HSP90AB1P08238 724 aaKnown RBP15.99■□□□□ 0.15
NGDN-212ENST00000556953 MPRIPQ6WCQ1 1025 aa15.99■□□□□ 0.15
NGDN-212ENST00000556953 SLC15A2Q16348 729 aa15.98■□□□□ 0.15
NGDN-212ENST00000556953 TOGARAM1Q9Y4F4 1720 aa15.97■□□□□ 0.15
NGDN-212ENST00000556953 HMGB2P26583 209 aaKnown RBP15.97■□□□□ 0.15
NGDN-212ENST00000556953 ZNF530Q6P9A1 599 aaPredicted RBP15.97■□□□□ 0.15
NGDN-212ENST00000556953 CFAP53Q96M91 514 aa15.97■□□□□ 0.15
NGDN-212ENST00000556953 LRRC4BQ9NT99 713 aa15.97■□□□□ 0.15
NGDN-212ENST00000556953 COL3A1P02461 1466 aaPredicted RBP15.97■□□□□ 0.15
NGDN-212ENST00000556953 LY75O60449 1722 aa15.97■□□□□ 0.15
NGDN-212ENST00000556953 C1orf141Q5JVX7 400 aa15.96■□□□□ 0.15
NGDN-212ENST00000556953 SMARCC1Q92922 1105 aaPredicted RBP15.96■□□□□ 0.15
NGDN-212ENST00000556953 DCAF5Q96JK2 942 aa15.96■□□□□ 0.15
NGDN-212ENST00000556953 TMOD3Q9NYL9 352 aa15.96■□□□□ 0.15
NGDN-212ENST00000556953 PAPPAQ13219 1627 aa15.96■□□□□ 0.15
NGDN-212ENST00000556953 ITGB4P16144 1822 aa15.96■□□□□ 0.14
NGDN-212ENST00000556953 PIGBQ92521 554 aa15.95■□□□□ 0.14
NGDN-212ENST00000556953 CCNL1Q9UK58 526 aaPredicted RBP15.95■□□□□ 0.14
NGDN-212ENST00000556953 PALLDQ8WX93 1383 aa15.95■□□□□ 0.14
NGDN-212ENST00000556953 ERVV-2B6SEH9 535 aa15.94■□□□□ 0.14
NGDN-212ENST00000556953 HMOX1P09601 288 aa15.94■□□□□ 0.14
NGDN-212ENST00000556953 PPP2R1AP30153 589 aa15.94■□□□□ 0.14
NGDN-212ENST00000556953 U2SURPO15042 1029 aaKnown RBP15.93■□□□□ 0.14
NGDN-212ENST00000556953 SPON1Q9HCB6 807 aa15.93■□□□□ 0.14
NGDN-212ENST00000556953 AKT1S1Q96B36 256 aa15.92■□□□□ 0.14
NGDN-212ENST00000556953 NUDCQ9Y266 331 aa15.92■□□□□ 0.14
NGDN-212ENST00000556953 CASZ1Q86V15 1759 aa15.92■□□□□ 0.14
NGDN-212ENST00000556953 KCNQ4P56696 695 aa15.91■□□□□ 0.14
NGDN-212ENST00000556953 ZNF827Q17R98 1081 aa15.91■□□□□ 0.14
NGDN-212ENST00000556953 AKAP4Q5JQC9 854 aa15.91■□□□□ 0.14
NGDN-212ENST00000556953 KDM6AO15550 1401 aaPredicted RBP15.91■□□□□ 0.14
NGDN-212ENST00000556953 CABP4P57796 275 aa15.9■□□□□ 0.14
NGDN-212ENST00000556953 DDX10Q13206 875 aaKnown RBP15.9■□□□□ 0.14
NGDN-212ENST00000556953 PDGFDQ9GZP0 370 aaPredicted RBP15.89■□□□□ 0.13
NGDN-212ENST00000556953 TFCP2L1Q9NZI6 479 aa15.89■□□□□ 0.13
NGDN-212ENST00000556953 ASAP1Q9ULH1 1129 aa15.89■□□□□ 0.13
NGDN-212ENST00000556953 LOC102724428A0A0B4J2F2 783 aa15.88■□□□□ 0.13
NGDN-212ENST00000556953 SIK1P57059 783 aa15.88■□□□□ 0.13
NGDN-212ENST00000556953 MTFR1LQ9H019 292 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms