RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 POLKQ9UBT6 870 aa19.2■□□□□ 0.66
SLIRP-207ENST00000556831 NUP188Q5SRE5 1749 aa19.2■□□□□ 0.66
SLIRP-207ENST00000556831 KCNQ2O43526 872 aa19.19■□□□□ 0.66
SLIRP-207ENST00000556831 ACSBG1Q96GR2 724 aa19.18■□□□□ 0.66
SLIRP-207ENST00000556831 ZEB1P37275 1124 aaPredicted RBP19.17■□□□□ 0.66
SLIRP-207ENST00000556831 RAPGEF4Q8WZA2 1011 aa19.17■□□□□ 0.66
SLIRP-207ENST00000556831 NHSQ6T4R5 1651 aa19.17■□□□□ 0.66
SLIRP-207ENST00000556831 AMER1Q5JTC6 1135 aaPredicted RBP19.16■□□□□ 0.66
SLIRP-207ENST00000556831 BCL9O00512 1426 aa19.16■□□□□ 0.66
SLIRP-207ENST00000556831 PER1O15534 1290 aaPredicted RBP19.15■□□□□ 0.66
SLIRP-207ENST00000556831 TATP17735 454 aaPredicted RBP19.14■□□□□ 0.65
SLIRP-207ENST00000556831 CC2D1BQ5T0F9 858 aaKnown RBP19.14■□□□□ 0.65
SLIRP-207ENST00000556831 DDX54Q8TDD1 881 aaKnown RBP19.14■□□□□ 0.65
SLIRP-207ENST00000556831 PPP1R1BQ9UD71 204 aaPredicted RBP19.14■□□□□ 0.65
SLIRP-207ENST00000556831 DOT1LQ8TEK3 1739 aa19.14■□□□□ 0.65
SLIRP-207ENST00000556831 CNGB1Q14028 1251 aaPredicted RBP19.13■□□□□ 0.65
SLIRP-207ENST00000556831 NCAPD2Q15021 1401 aa19.12■□□□□ 0.65
SLIRP-207ENST00000556831 BCL11BQ9C0K0 894 aaPredicted RBP19.12■□□□□ 0.65
SLIRP-207ENST00000556831 BTAF1O14981 1849 aa19.11■□□□□ 0.65
SLIRP-207ENST00000556831 EIF4A2Q14240 407 aaKnown RBP19.11■□□□□ 0.65
SLIRP-207ENST00000556831 PROM2Q8N271 834 aa19.11■□□□□ 0.65
SLIRP-207ENST00000556831 EYA1Q99502 592 aa19.11■□□□□ 0.65
SLIRP-207ENST00000556831 PARD3Q8TEW0 1356 aa19.1■□□□□ 0.65
SLIRP-207ENST00000556831 ZCRB1Q8TBF4 217 aaKnown RBP19.1■□□□□ 0.65
SLIRP-207ENST00000556831 RGPD3A6NKT7 1758 aaPredicted RBP19.1■□□□□ 0.65
SLIRP-207ENST00000556831 RGPD4Q7Z3J3 1758 aa19.1■□□□□ 0.65
SLIRP-207ENST00000556831 NPC1L1Q9UHC9 1359 aa19.09■□□□□ 0.65
SLIRP-207ENST00000556831 KAT6BQ8WYB5 2073 aa19.09■□□□□ 0.65
SLIRP-207ENST00000556831 PKD1L3Q7Z443 1732 aa19.08■□□□□ 0.65
SLIRP-207ENST00000556831 TOGARAM1Q9Y4F4 1720 aa19.08■□□□□ 0.65
SLIRP-207ENST00000556831 SLC34A2O95436 690 aa19.07■□□□□ 0.64
SLIRP-207ENST00000556831 ANO8Q9HCE9 1232 aaPredicted RBP19.07■□□□□ 0.64
SLIRP-207ENST00000556831 PCDH11XQ9BZA7 1347 aa19.06■□□□□ 0.64
SLIRP-207ENST00000556831 PCDH11YQ9BZA8 1340 aa19.06■□□□□ 0.64
SLIRP-207ENST00000556831 GIGYF1O75420 1035 aaPredicted RBP19.06■□□□□ 0.64
SLIRP-207ENST00000556831 UTRNP46939 3433 aa19.05■□□□□ 0.64
SLIRP-207ENST00000556831 CHD4Q14839 1912 aa19.04■□□□□ 0.64
SLIRP-207ENST00000556831 PLSCR1O15162 318 aa19.04■□□□□ 0.64
SLIRP-207ENST00000556831 CYP27B1O15528 508 aa19.04■□□□□ 0.64
SLIRP-207ENST00000556831 SPON1Q9HCB6 807 aa19.04■□□□□ 0.64
SLIRP-207ENST00000556831 SPG7Q9UQ90 795 aa19.04■□□□□ 0.64
SLIRP-207ENST00000556831 PRIM1P49642 420 aaKnown RBP19.03■□□□□ 0.64
SLIRP-207ENST00000556831 AEBP1Q8IUX7 1158 aa19.03■□□□□ 0.64
SLIRP-207ENST00000556831 SYTL4Q96C24 671 aaPredicted RBP19.03■□□□□ 0.64
SLIRP-207ENST00000556831 MTHFSP49914 203 aa19.02■□□□□ 0.64
SLIRP-207ENST00000556831 TXNRD1Q16881 649 aa19.02■□□□□ 0.64
SLIRP-207ENST00000556831 PCDH10Q9P2E7 1040 aa19.02■□□□□ 0.64
SLIRP-207ENST00000556831 IGSF1Q8N6C5 1336 aa19.01■□□□□ 0.63
SLIRP-207ENST00000556831 PAPPAQ13219 1627 aa19.01■□□□□ 0.63
SLIRP-207ENST00000556831 KCNQ4P56696 695 aa19.01■□□□□ 0.63
SLIRP-207ENST00000556831 PDGFDQ9GZP0 370 aaPredicted RBP19.01■□□□□ 0.63
SLIRP-207ENST00000556831 NBPF14Q5TI25 921 aa19■□□□□ 0.63
SLIRP-207ENST00000556831 CFAP53Q96M91 514 aa19■□□□□ 0.63
SLIRP-207ENST00000556831 PLEKHG2Q9H7P9 1386 aa19■□□□□ 0.63
SLIRP-207ENST00000556831 IL13P35225 146 aa18.99■□□□□ 0.63
SLIRP-207ENST00000556831 LRRC4BQ9NT99 713 aa18.99■□□□□ 0.63
SLIRP-207ENST00000556831 ITGB4P16144 1822 aa18.99■□□□□ 0.63
SLIRP-207ENST00000556831 COL3A1P02461 1466 aaPredicted RBP18.98■□□□□ 0.63
SLIRP-207ENST00000556831 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.98■□□□□ 0.63
SLIRP-207ENST00000556831 LY75O60449 1722 aa18.97■□□□□ 0.63
SLIRP-207ENST00000556831 DIAPH1O60610 1272 aaKnown RBP18.97■□□□□ 0.63
SLIRP-207ENST00000556831 CASZ1Q86V15 1759 aa18.96■□□□□ 0.63
SLIRP-207ENST00000556831 PLEKHO1Q53GL0 409 aaPredicted RBP18.96■□□□□ 0.63
SLIRP-207ENST00000556831 SULT6B1Q6IMI4 303 aa18.96■□□□□ 0.63
SLIRP-207ENST00000556831 ZNF827Q17R98 1081 aa18.94■□□□□ 0.62
SLIRP-207ENST00000556831 AMOTQ4VCS5 1084 aa18.94■□□□□ 0.62
SLIRP-207ENST00000556831 IFNL2Q8IZJ0 200 aa18.94■□□□□ 0.62
SLIRP-207ENST00000556831 TUBGCP6Q96RT7 1819 aa18.93■□□□□ 0.62
SLIRP-207ENST00000556831 U2SURPO15042 1029 aaKnown RBP18.93■□□□□ 0.62
SLIRP-207ENST00000556831 PHKG2P15735 406 aa18.93■□□□□ 0.62
SLIRP-207ENST00000556831 HSP90AB1P08238 724 aaKnown RBP18.92■□□□□ 0.62
SLIRP-207ENST00000556831 DDX10Q13206 875 aaKnown RBP18.92■□□□□ 0.62
SLIRP-207ENST00000556831 C1orf141Q5JVX7 400 aa18.92■□□□□ 0.62
SLIRP-207ENST00000556831 MPRIPQ6WCQ1 1025 aa18.92■□□□□ 0.62
SLIRP-207ENST00000556831 KDRP35968 1356 aa18.92■□□□□ 0.62
SLIRP-207ENST00000556831 HMOX1P09601 288 aa18.91■□□□□ 0.62
SLIRP-207ENST00000556831 NKX1-1Q15270 411 aaPredicted RBP18.91■□□□□ 0.62
SLIRP-207ENST00000556831 ZNF530Q6P9A1 599 aaPredicted RBP18.91■□□□□ 0.62
SLIRP-207ENST00000556831 NUDCQ9Y266 331 aa18.91■□□□□ 0.62
SLIRP-207ENST00000556831 KDM6AO15550 1401 aaPredicted RBP18.91■□□□□ 0.62
SLIRP-207ENST00000556831 PPP2R1AP30153 589 aa18.9■□□□□ 0.62
SLIRP-207ENST00000556831 SLC15A2Q16348 729 aa18.89■□□□□ 0.61
SLIRP-207ENST00000556831 PIGBQ92521 554 aa18.89■□□□□ 0.61
SLIRP-207ENST00000556831 STK32BQ9NY57 414 aa18.89■□□□□ 0.61
SLIRP-207ENST00000556831 SLC27A3Q5K4L6 730 aa18.88■□□□□ 0.61
SLIRP-207ENST00000556831 TMOD3Q9NYL9 352 aa18.88■□□□□ 0.61
SLIRP-207ENST00000556831 HMGB2P26583 209 aaKnown RBP18.87■□□□□ 0.61
SLIRP-207ENST00000556831 PALLDQ8WX93 1383 aa18.86■□□□□ 0.61
SLIRP-207ENST00000556831 AKT1S1Q96B36 256 aa18.86■□□□□ 0.61
SLIRP-207ENST00000556831 DCAF5Q96JK2 942 aa18.86■□□□□ 0.61
SLIRP-207ENST00000556831 TAF1LQ8IZX4 1826 aa18.86■□□□□ 0.61
SLIRP-207ENST00000556831 C5P01031 1676 aa18.85■□□□□ 0.61
SLIRP-207ENST00000556831 ZBTB7AO95365 584 aa18.85■□□□□ 0.61
SLIRP-207ENST00000556831 RALBP1Q15311 655 aa18.85■□□□□ 0.61
SLIRP-207ENST00000556831 SMARCC1Q92922 1105 aaPredicted RBP18.85■□□□□ 0.61
SLIRP-207ENST00000556831 CCNL1Q9UK58 526 aaPredicted RBP18.85■□□□□ 0.61
SLIRP-207ENST00000556831 ASAP1Q9ULH1 1129 aa18.84■□□□□ 0.61
SLIRP-207ENST00000556831 VIRMAQ69YN4 1812 aaKnown RBP18.84■□□□□ 0.61
SLIRP-207ENST00000556831 SMIM5Q71RC9 77 aa18.83■□□□□ 0.6
SLIRP-207ENST00000556831 NEFMP07197 916 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms